ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet53b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide ... 632 e-178
2emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlor... 394 e-107
3ref|XM_474360.1| Oryza sativa (japonica cultivar-group), predic... 56 8e-05
4emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 56 8e-05
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 8e-05
6dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
7dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
8dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
9dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
10emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 8e-05
11emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 8e-05
12gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene... 44 0.29
13ref|XM_957279.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.2
14ref|XM_326192.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.2
15gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosom... 42 1.2
16ref|XM_479797.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
17gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
18gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, com... 40 4.6
19gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 4.6
20gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosom... 40 4.6
21ref|XM_982866.1| PREDICTED: Mus musculus microtubule associated ... 40 4.6
22ref|XM_888290.2| PREDICTED: Mus musculus microtubule associated ... 40 4.6
23ref|XM_979773.1| PREDICTED: Mus musculus microtubule associated ... 40 4.6
24gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome... 40 4.6
25gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, compl... 40 4.6
26emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA 40 4.6
27gb|AF498106.1| Aedes aegypti relish R7 isoform mRNA, complete cd... 40 4.6
28gb|AF498105.1| Aedes aegypti relish R6 isoform mRNA, complete cd... 40 4.6
29gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome... 40 4.6
30dbj|AK140821.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 4.6
31gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, comple... 40 4.6
32gb|CP000249.1| Frankia sp. CcI3, complete genome 40 4.6
33gb|DQ384244.1| Olyra latifolia tasselseed2-like short-chain dehy... 40 4.6
34dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
36gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 4.6
37gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complet... 40 4.6
38gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 o... 40 4.6
39gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.6
40dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.6
41dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
42dbj|AK172971.1| Mus musculus mRNA for mKIAA0561 protein 40 4.6
43gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the... 40 4.6
44dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
45gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 4.6
46dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
47gb|BC024265.1| Mus musculus microtubule associated serine/threon... 40 4.6 
>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR)
          Length = 1490

 Score =  632 bits (319), Expect = e-178
 Identities = 319/319 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 70

                                                                       
Query: 83  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 130

                                                                       
Query: 143 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 190

                                                                       
Query: 203 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcctt 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcctt 250

                                                                       
Query: 263 cgccggtgacgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgc 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cgccggtgacgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgc 310

                              
Query: 323 ggcagggcgtggtggtgat 341
           |||||||||||||||||||
Sbjct: 311 ggcagggcgtggtggtgat 329
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>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase
          Length = 1484

 Score =  394 bits (199), Expect = e-107
 Identities = 238/251 (94%)
 Strand = Plus / Plus

                                                                       
Query: 91  agctcaccgtcatccatggctctccagcttctcccctccaccctctccgtccccaagaag 150
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 58  agctcaccgtcatccatggctctccagctcctcccctccaccctctccgtccccaagaag 117

                                                                       
Query: 151 ggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcgtgagcagc 210
           || |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 118 ggtagcagcatgggcgcggcggcagtgaaggacacggcggcgttcctgggcgtgagcagc 177

                                                                       
Query: 211 aaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgccttcgccggtg 270
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 178 aaggcgaagaaggcgtcgctagcggtgaggacgcaggtggccacggcgccttcgtcggtg 237

                                                                       
Query: 271 acgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggc 330
           |||||||||||||||||| |  || ||  |||||||||||||||||||||||||||||||
Sbjct: 238 acgacgagcccgggctcggcgacggcgaagccgagcggcaagaagacgctgcggcagggc 297

                      
Query: 331 gtggtggtgat 341
           |||||||||||
Sbjct: 298 gtggtggtgat 308
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>ref|XM_474360.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1164

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 310 aagaagacgctgcggcagggcgtggtggtgat 341
           |||||||||||||||||||| |||||||||||
Sbjct: 202 aagaagacgctgcggcagggggtggtggtgat 233
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
            complete sequence
          Length = 133331

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 310  aagaagacgctgcggcagggcgtggtggtgat 341
            |||||||||||||||||||| |||||||||||
Sbjct: 4144 aagaagacgctgcggcagggggtggtggtgat 4175
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 310      aagaagacgctgcggcagggcgtggtggtgat 341
                |||||||||||||||||||| |||||||||||
Sbjct: 34698582 aagaagacgctgcggcagggggtggtggtgat 34698613
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>dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B11, full
           insert sequence
          Length = 1384

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 310 aagaagacgctgcggcagggcgtggtggtgat 341
           |||||||||||||||||||| |||||||||||
Sbjct: 274 aagaagacgctgcggcagggggtggtggtgat 305
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>dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G12, full
           insert sequence
          Length = 1384

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 310 aagaagacgctgcggcagggcgtggtggtgat 341
           |||||||||||||||||||| |||||||||||
Sbjct: 274 aagaagacgctgcggcagggggtggtggtgat 305
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>dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G08, full
           insert sequence
          Length = 1384

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 310 aagaagacgctgcggcagggcgtggtggtgat 341
           |||||||||||||||||||| |||||||||||
Sbjct: 274 aagaagacgctgcggcagggggtggtggtgat 305
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>dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H23, full
           insert sequence
          Length = 1385

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 310 aagaagacgctgcggcagggcgtggtggtgat 341
           |||||||||||||||||||| |||||||||||
Sbjct: 275 aagaagacgctgcggcagggggtggtggtgat 306
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>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete
             sequence
          Length = 100836

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 310   aagaagacgctgcggcagggcgtggtggtgat 341
             |||||||||||||||||||| |||||||||||
Sbjct: 96506 aagaagacgctgcggcagggggtggtggtgat 96537
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>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 310   aagaagacgctgcggcagggcgtggtggtgat 341
             |||||||||||||||||||| |||||||||||
Sbjct: 41602 aagaagacgctgcggcagggggtggtggtgat 41633
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>gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene, complete cds
          Length = 2142

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 283 ggctcgaccgcgtcgtcgccga 304
           ||||||||||||||||||||||
Sbjct: 140 ggctcgaccgcgtcgtcgccga 119
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>ref|XM_957279.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial
            mRNA
          Length = 5772

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 199  ggcgtgagcagcaaggcgaagaagg 223
            ||||||||||||||||| |||||||
Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
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>ref|XM_326192.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial
            mRNA
          Length = 5772

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 199  ggcgtgagcagcaaggcgaagaagg 223
            ||||||||||||||||| |||||||
Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
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>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence
          Length = 164612

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   cttctcccctccaccctctcc 138
             |||||||||||||||||||||
Sbjct: 42019 cttctcccctccaccctctcc 41999
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>ref|XM_479797.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2387

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 205  agcagcaaggcgaagaaggcgtcgctgg 232
            |||||||||||||| |||||| ||||||
Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
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>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ctcgaccgcgtcgtcgccga 304
             ||||||||||||||||||||
Sbjct: 50427 ctcgaccgcgtcgtcgccga 50446
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>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence
          Length = 197906

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    gctgcggcagggcgtggtgg 337
              ||||||||||||||||||||
Sbjct: 132507 gctgcggcagggcgtggtgg 132526
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 211     aaggcgaagaaggcgtcgctggcg 234
               |||| |||||||||||||||||||
Sbjct: 3274483 aaggggaagaaggcgtcgctggcg 3274506
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>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence
          Length = 211910

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ctctccagcttctcccctcc 129
              ||||||||||||||||||||
Sbjct: 118208 ctctccagcttctcccctcc 118189
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>ref|XM_982866.1| PREDICTED: Mus musculus microtubule associated serine/threonine
            kinase 3, transcript variant 2 (Mast3), mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  gctgcggcagggcgtggtgg 337
            ||||||||||||||||||||
Sbjct: 3427 gctgcggcagggcgtggtgg 3408
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>ref|XM_888290.2| PREDICTED: Mus musculus microtubule associated serine/threonine
            kinase 3, transcript variant 2 (Mast3), mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  gctgcggcagggcgtggtgg 337
            ||||||||||||||||||||
Sbjct: 3427 gctgcggcagggcgtggtgg 3408
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>ref|XM_979773.1| PREDICTED: Mus musculus microtubule associated serine/threonine
            kinase 3 (Mast3), mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  gctgcggcagggcgtggtgg 337
            ||||||||||||||||||||
Sbjct: 3427 gctgcggcagggcgtggtgg 3408
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>gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome 1, complete sequence
          Length = 172452

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    ccccaagaagggcagcagca 160
              ||||||||||||||||||||
Sbjct: 124088 ccccaagaagggcagcagca 124069
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>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     gcagtgcagtgctagctagc 81
              ||||||||||||||||||||
Sbjct: 181503 gcagtgcagtgctagctagc 181484
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>emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA
          Length = 555

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 174 ggtgaaggacacggcggcgt 193
           ||||||||||||||||||||
Sbjct: 224 ggtgaaggacacggcggcgt 205
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>gb|AF498106.1| Aedes aegypti relish R7 isoform mRNA, complete cds; alternatively
            spliced
          Length = 2730

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   agctcgttgaactcctgcag 65
            ||||||||||||||||||||
Sbjct: 1390 agctcgttgaactcctgcag 1409
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>gb|AF498105.1| Aedes aegypti relish R6 isoform mRNA, complete cds; alternatively
            spliced
          Length = 3280

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   agctcgttgaactcctgcag 65
            ||||||||||||||||||||
Sbjct: 1941 agctcgttgaactcctgcag 1960
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>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete
            sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   gcagtgcagtgctagctagc 81
            ||||||||||||||||||||
Sbjct: 2135 gcagtgcagtgctagctagc 2154
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>dbj|AK140821.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130034L06 product:weakly similar to
            Sast-pending protein [Mus musculus], full insert sequence
          Length = 4263

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  gctgcggcagggcgtggtgg 337
            ||||||||||||||||||||
Sbjct: 3507 gctgcggcagggcgtggtgg 3488
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>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence
          Length = 104285

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ccagcttctcccctccaccc 133
             ||||||||||||||||||||
Sbjct: 51908 ccagcttctcccctccaccc 51927
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 209     gcaaggcgaagaaggcgtcg 228
               ||||||||||||||||||||
Sbjct: 1457481 gcaaggcgaagaaggcgtcg 1457500
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>gb|DQ384244.1| Olyra latifolia tasselseed2-like short-chain
           dehydrogenase/reductase gene, partial cds
          Length = 759

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 249 ggccacggcgccttcgccggtgacgacg 276
           ||||||| ||||||||||| ||||||||
Sbjct: 565 ggccacgacgccttcgccgctgacgacg 592
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 205    agcagcaaggcgaagaaggcgtcgctgg 232
              |||||||||||||| |||||| ||||||
Sbjct: 971854 agcagcaaggcgaacaaggcggcgctgg 971881
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 285      ctcgaccgcgtcgtcgccga 304
                ||||||||||||||||||||
Sbjct: 16551688 ctcgaccgcgtcgtcgccga 16551707
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 257     cgccttcgccggtgacgacg 276
               ||||||||||||||||||||
Sbjct: 2286225 cgccttcgccggtgacgacg 2286244
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>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence
          Length = 185555

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 111   tctccagcttctcccctccaccct 134
             ||||||||||||| ||||||||||
Sbjct: 85347 tctccagcttctctcctccaccct 85370
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>gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 of the complete
            genome
          Length = 14449

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  ggcgtcgctggcggtgagga 241
            ||||||||||||||||||||
Sbjct: 4846 ggcgtcgctggcggtgagga 4865
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     cgaccgcgtcgtcgccgagc 306
               ||||||||||||||||||||
Sbjct: 1012168 cgaccgcgtcgtcgccgagc 1012187
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     ctcgaccgcgtcgtcgccga 304
               ||||||||||||||||||||
Sbjct: 2286263 ctcgaccgcgtcgtcgccga 2286282



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     ctcgaccgcgtcgtcgccga 304
               ||||||||||||||||||||
Sbjct: 1600910 ctcgaccgcgtcgtcgccga 1600929
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>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 205    agcagcaaggcgaagaaggcgtcgctgg 232
              |||||||||||||| |||||| ||||||
Sbjct: 134592 agcagcaaggcgaacaaggcggcgctgg 134619
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>dbj|AK172971.1| Mus musculus mRNA for mKIAA0561 protein
          Length = 1425

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 gctgcggcagggcgtggtgg 337
           ||||||||||||||||||||
Sbjct: 703 gctgcggcagggcgtggtgg 684
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>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome
          Length = 12204

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  cgaccgcgtcgtcgccgagc 306
            ||||||||||||||||||||
Sbjct: 5711 cgaccgcgtcgtcgccgagc 5692
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>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           BAC clone:OJ1005_B05
          Length = 144799

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 205 agcagcaaggcgaagaaggcgtcgctgg 232
           |||||||||||||| |||||| ||||||
Sbjct: 381 agcagcaaggcgaacaaggcggcgctgg 408
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 284     gctcgaccgcgtcgtcgccgagcg 307
               ||||||||| ||||||||||||||
Sbjct: 1756600 gctcgaccgggtcgtcgccgagcg 1756623
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>dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104G24, full
            insert sequence
          Length = 2387

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 205  agcagcaaggcgaagaaggcgtcgctgg 232
            |||||||||||||| |||||| ||||||
Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
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>gb|BC024265.1| Mus musculus microtubule associated serine/threonine kinase 3, mRNA
            (cDNA clone IMAGE:5137303), complete cds
          Length = 3042

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  gctgcggcagggcgtggtgg 337
            ||||||||||||||||||||
Sbjct: 1139 gctgcggcagggcgtggtgg 1120


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,152,961
Number of Sequences: 3902068
Number of extensions: 3152961
Number of successful extensions: 67746
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66883
Number of HSP's gapped (non-prelim): 862
length of query: 346
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 324
effective length of database: 17,147,199,772
effective search space: 5555692726128
effective search space used: 5555692726128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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