| Clone Name | baet53b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 0.29 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 ggactcgccccccatgccgccgtcg 74 |||||||| |||||||||||||||| Sbjct: 1298565 ggactcgcgccccatgccgccgtcg 1298589
>gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0009C07, complete sequence Length = 124266 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 gcatcgcgccgccgccacat 43 |||||||||||||||||||| Sbjct: 32242 gcatcgcgccgccgccacat 32223
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 gcatcgcgccgccgccacat 43 |||||||||||||||||||| Sbjct: 5749157 gcatcgcgccgccgccacat 5749176
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 gcatcgcgccgccgccacat 43 |||||||||||||||||||| Sbjct: 5750344 gcatcgcgccgccgccacat 5750363
>gb|BT017338.1| Zea mays clone EL01N0321D06.c mRNA sequence Length = 620 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 gccgccgtcgtccaagccg 83 ||||||||||||||||||| Sbjct: 83 gccgccgtcgtccaagccg 101
>emb|AL627275.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 11/20 Length = 145050 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 53 ctcgccccccatgccgccgtcgt 75 ||||||||||||||||| ||||| Sbjct: 53013 ctcgccccccatgccgctgtcgt 53035
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 atcgcatcgcgccgccgcc 39 ||||||||||||||||||| Sbjct: 1223241 atcgcatcgcgccgccgcc 1223259
>emb|AJ492618.1|MRU492618 Mitragyna rubrostipulata ITS1, 5.8S rRNA gene and ITS2, clone MIT11 Length = 608 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 cgcatcgcgccgccgccac 41 ||||||||||||||||||| Sbjct: 390 cgcatcgcgccgccgccac 408
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 taatcgcatcgcgccgccg 37 ||||||||||||||||||| Sbjct: 22193700 taatcgcatcgcgccgccg 22193682
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 taatcgcatcgcgccgccg 37 ||||||||||||||||||| Sbjct: 89544 taatcgcatcgcgccgccg 89526
>gb|AY105144.1| Zea mays PCO097109 mRNA sequence Length = 682 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 gccgccgtcgtccaagccg 83 ||||||||||||||||||| Sbjct: 164 gccgccgtcgtccaagccg 182
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 53 ctcgccccccatgccgccgtcgt 75 ||||||||||||||||| ||||| Sbjct: 394836 ctcgccccccatgccgctgtcgt 394814 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 588,428 Number of Sequences: 3902068 Number of extensions: 588428 Number of successful extensions: 41122 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40633 Number of HSP's gapped (non-prelim): 489 length of query: 103 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 82 effective length of database: 17,151,101,840 effective search space: 1406390350880 effective search space used: 1406390350880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)