ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet53a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PPE01_MYCTU (Q10892) Hypothetical PPE-family protein PPE1 32 0.52
2CHEB3_PSEAE (Q9HXT8) Chemotaxis response regulator protein-gluta... 32 0.52
3AL1A1_RAT (P51647) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1... 32 0.89
4AL1A1_MOUSE (P24549) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD... 32 0.89
5EFTS_ZYMMO (Q9X5E8) Elongation factor Ts (EF-Ts) 31 1.2
6AL1A1_MACFA (Q8HYE4) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD... 30 2.0
7AL1A1_HUMAN (P00352) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD... 30 2.0
8CHB1_LYMDI (P43515) Chorion class B protein Ld10 precursor 30 2.0
9VNS1_AHSV6 (P87505) Nonstructural protein NS1 30 2.0
10VNS1_AHSV4 (Q03068) Nonstructural protein NS1 (Hydrophobic tubul... 30 2.0
11CXI_CONCE (P69494) I-superfamily conotoxin precursor 30 2.6
12AL1A4_RAT (P13601) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1... 30 2.6
13AL1A1_RABIT (Q8MI17) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD... 30 2.6
14YAGX_ECOLI (P77802) Hypothetical protein yagX precursor 30 3.4
15VNS1_AHSV9 (Q85967) Nonstructural protein NS1 30 3.4
16KRA55_HUMAN (Q701N2) Keratin-associated protein 5-5 (Keratin-ass... 29 4.4
17AL1A1_SHEEP (P51977) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD... 29 5.8
18AL1A1_HORSE (P15437) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD... 29 5.8
19AL1A1_BOVIN (P48644) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD... 29 5.8
20ZF64B_HUMAN (Q9NTW7) Zinc finger protein 64, isoforms 3 and 4 (Z... 29 5.8
21ZFP64_MOUSE (Q99KE8) Zinc finger protein 64 (Zfp-64) 29 5.8
22ALDH1_MACPR (Q29490) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2... 28 7.6
23ALDH1_ELEED (Q28399) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2... 28 7.6
24SHAN2_RAT (Q9QX74) SH3 and multiple ankyrin repeat domains prote... 28 9.9
25FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 3... 28 9.9
26SYH_STRCO (Q9KXP2) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histi... 28 9.9
27RFAY_XANCP (P46358) Probable RNA polymerase sigma factor rfaY 28 9.9
28FBX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein 3... 28 9.9
29SMD3_SCHPO (Q9UUC6) Probable small nuclear ribonucleoprotein Sm ... 28 9.9
30FTRL_METKA (Q8TX60) Formylmethanofuran--tetrahydromethanopterin ... 28 9.9
31KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-ass... 28 9.9
32CHHA2_BOMMO (P05687) Chorion class high-cysteine HCA protein 12 ... 28 9.9
33SYFA_FUSNN (Q8RHB4) Phenylalanyl-tRNA synthetase alpha chain (EC... 28 9.9

>PPE01_MYCTU (Q10892) Hypothetical PPE-family protein PPE1|
          Length = 463

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 293 PGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGV 171
           PG +PPTS+P     +++ V  A   PG    VPG+   GV
Sbjct: 304 PGGSPPTSNPAPAAPSSNSVGSASAAPGISYAVPGLAPPGV 344



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>CHEB3_PSEAE (Q9HXT8) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 3 operon (EC 3.1.1.61)
          Length = 335

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 24/62 (38%), Positives = 30/62 (48%)
 Frame = -2

Query: 320 RLVCVGGDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVG 141
           RLV +G    G   P S  VL     +  + AVVL  H+D V   G+   L  E +LPV 
Sbjct: 152 RLVAIGASAGG---PASLAVLLKQLPASFNAAVVLVQHVDEVFAAGMAEWLASESKLPVR 208

Query: 140 LA 135
           LA
Sbjct: 209 LA 210



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>AL1A1_RAT (P51647) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 22/78 (28%), Positives = 33/78 (42%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 123
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + V       
Sbjct: 186 GNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245

Query: 122 IAQVAAIALRPQSDAAGK 69
             QV  +      +AAGK
Sbjct: 246 STQVGKLI----KEAAGK 259



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>AL1A1_MOUSE (P24549) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 22/78 (28%), Positives = 33/78 (42%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 123
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + V       
Sbjct: 186 GNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245

Query: 122 IAQVAAIALRPQSDAAGK 69
             QV  +      +AAGK
Sbjct: 246 STQVGKLI----KEAAGK 259



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>EFTS_ZYMMO (Q9X5E8) Elongation factor Ts (EF-Ts)|
          Length = 307

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
 Frame = -2

Query: 296 TPGVAPPTSHPVLTVVAASDVHEAVVLPG-HLDVVPGVGVNGVL-TVELQLP------VG 141
           T  +A    +  L   A  +V   VV+P  H  V PGVG  GVL  +E + P      +G
Sbjct: 126 TANIATIGENQALRRAALLEVENGVVVPYIHNQVAPGVGKIGVLVALESEAPSDFLESLG 185

Query: 140 LAVLVHIAQVAAIALRPQS--DAA 75
             + +H+A    +AL   S  DAA
Sbjct: 186 KQIAMHVAAATPLALDEDSLDDAA 209



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>AL1A1_MACFA (Q8HYE4) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/78 (25%), Positives = 33/78 (42%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 123
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + +       
Sbjct: 186 GNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 245

Query: 122 IAQVAAIALRPQSDAAGK 69
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259



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>AL1A1_HUMAN (P00352) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/78 (25%), Positives = 33/78 (42%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 123
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + +       
Sbjct: 186 GNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 245

Query: 122 IAQVAAIALRPQSDAAGK 69
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259



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>CHB1_LYMDI (P43515) Chorion class B protein Ld10 precursor|
          Length = 191

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 308 VGGDTPGVAPPTSHPVLTVVAASDVHEAVV-LPGHLDVVPGVGVNGVL 168
           +GG  P  +     PV  VVA+ +V+E ++   G L  V  VGV GVL
Sbjct: 78  IGGGLPVSSASAIAPVGLVVASENVYEGILAAAGELPFVGTVGVEGVL 125



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>VNS1_AHSV6 (P87505) Nonstructural protein NS1|
          Length = 548

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 221 VLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVHIAQVAAIALRPQSDAAGKFYFFYHS 48
           ++ G L V P  G NG +   L LP+ + V++ + + A   +R    AA  F F  H+
Sbjct: 196 LIEGRLPVCPYTGANGRINAVLHLPLEMEVIMAVQENATQLMR---RAAQDFKFITHA 250



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>VNS1_AHSV4 (Q03068) Nonstructural protein NS1 (Hydrophobic tubular protein)|
          Length = 548

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 221 VLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVHIAQVAAIALRPQSDAAGKFYFFYHS 48
           ++ G L V P  G NG +   L LP+ + V++ + + A   +R    AA  F F  H+
Sbjct: 196 LIEGRLPVCPYTGANGRINAVLHLPLEMEVIMAVQENATQLMR---RAAQDFKFITHA 250



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>CXI_CONCE (P69494) I-superfamily conotoxin precursor|
          Length = 67

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 270 PPSTYGCSGIGCARGRCASGTLGRRTWCR 184
           PP  Y    + C RGRC SG      WCR
Sbjct: 31  PPGVYCTRHLPCCRGRCCSG------WCR 53



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>AL1A4_RAT (P13601) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1.3) (ALDH|
           class 1) (ALHDII) (ALDH-E1) (Aldehyde dehydrogenase
           family 1 member A4)
          Length = 500

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 21/78 (26%), Positives = 33/78 (42%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 123
           G+T  V P    P+  +  AS + EA   PG ++VVPG G      +   + +       
Sbjct: 186 GNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTG 245

Query: 122 IAQVAAIALRPQSDAAGK 69
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259



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>AL1A1_RABIT (Q8MI17) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 496

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 20/78 (25%), Positives = 33/78 (42%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 123
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + +       
Sbjct: 182 GNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 241

Query: 122 IAQVAAIALRPQSDAAGK 69
             +V  +      +AAGK
Sbjct: 242 STEVGKLI----KEAAGK 255



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>YAGX_ECOLI (P77802) Hypothetical protein yagX precursor|
          Length = 841

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
 Frame = +3

Query: 147 RQLQLNGKDT---INPYTRYDVQVSRKHNGLVHIRCRYNRKYWVARRRGDAWCIAADADE 317
           R   LNGK     ++PY RY+V++    N L        RK  +    G+   I     E
Sbjct: 687 RIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSYDIVSGRKSRLTLYPGNVAVI-----E 741

Query: 318 PEEDLTNPNCTLIKPIVTVTAAAAAEDG 401
           PE          +K +VTV+    AEDG
Sbjct: 742 PE----------VKQMVTVSGRIRAEDG 759



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>VNS1_AHSV9 (Q85967) Nonstructural protein NS1|
          Length = 548

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 221 VLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVHIAQVAAIALRPQSDAAGKFYFFYHS 48
           ++ G L V P  GVN  +   L LP+ + V++ + + A   +R    AA  F F  H+
Sbjct: 196 LIEGRLPVCPYTGVNSRINAVLHLPLEMEVIMAVQENATQLMR---RAAQDFKFITHA 250



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>KRA55_HUMAN (Q701N2) Keratin-associated protein 5-5 (Keratin-associated protein|
           5.5) (Ultrahigh sulfur keratin-associated protein 5.5)
           (Keratin-associated protein 5-11) (Keratin-associated
           protein 5.11)
          Length = 221

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 255 GCSGIGCARGRCASGTLGRRTWCRG 181
           GC G+G   G C SG  GR + C G
Sbjct: 13  GCGGLGSGCGGCGSGCGGRGSGCGG 37



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>AL1A1_SHEEP (P51977) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 123
           G+T  V P    P+  +   S + EA   PG +++VPG G      +   + V       
Sbjct: 186 GNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245

Query: 122 IAQVAAIALRPQSDAAGK 69
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259



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>AL1A1_HORSE (P15437) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 19/78 (24%), Positives = 33/78 (42%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 123
           G+T  V P    P+  +  A+ + EA   PG +++VPG G      +   + +       
Sbjct: 186 GNTVVVKPAEQTPLSALHVATLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 245

Query: 122 IAQVAAIALRPQSDAAGK 69
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259



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>AL1A1_BOVIN (P48644) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 123
           G+T  V P    P+  +   S + EA   PG +++VPG G      +   + V       
Sbjct: 186 GNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245

Query: 122 IAQVAAIALRPQSDAAGK 69
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259



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>ZF64B_HUMAN (Q9NTW7) Zinc finger protein 64, isoforms 3 and 4 (Zinc finger|
           protein 338)
          Length = 645

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 105 GCYLRYVHEHGETYRQLQLNGKDTINPYTRYDVQVSRKHNGLVHIRCRYNRK 260
           GC+ + VH   +  R L+++  D  +     D   SRK N  +H+RC  + K
Sbjct: 305 GCHFKTVHGMKDLDRHLRIHTGDKPHKCEFCDKCFSRKDNLTMHMRCHTSVK 356



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>ZFP64_MOUSE (Q99KE8) Zinc finger protein 64 (Zfp-64)|
          Length = 643

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 105 GCYLRYVHEHGETYRQLQLNGKDTINPYTRYDVQVSRKHNGLVHIRCRYNRK 260
           GC+ + VH   +  R L+++  D  +     D   SRK N  +H+RC  + K
Sbjct: 303 GCHFKTVHGMKDLDRHLRIHTGDKPHKCEFCDKCFSRKDNLTMHMRCHTSVK 354



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>ALDH1_MACPR (Q29490) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1.3) (ALDH|
           class 1) (ETA-crystallin)
          Length = 501

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVG 183
           G+T  V P    P+  +  AS + EA   PG +++VPG G
Sbjct: 187 GNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYG 226



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>ALDH1_ELEED (Q28399) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1.3) (ALDH|
           class 1) (ETA-crystallin)
          Length = 501

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVG 183
           G+T  V P    P+  +  AS + EA   PG +++VPG G
Sbjct: 187 GNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYG 226



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>SHAN2_RAT (Q9QX74) SH3 and multiple ankyrin repeat domains protein 2 (Shank2)|
            (Proline-rich synapse-associated protein 1) (ProSAP1)
            (Cortactin-binding protein 1) (CortBP1)
            (GKAP/SAPAP-interacting protein) (SPANK-3)
          Length = 1474

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 278  PTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVN 177
            P + P  T+VAA  V EAV+LP  +   P   V+
Sbjct: 992  PAAAPGRTIVAAGSVEEAVILPFRIPPPPLASVD 1025



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>FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34-like)|
          Length = 646

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 186 YTRYDVQVSRKHNGLVHIRCRYNRKYWVARRRGD 287
           Y + DV + R H    H    Y R YW+  RR D
Sbjct: 537 YEKGDVSLCRWHPKPYHHDLPYGRSYWMCCRRAD 570



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>SYH_STRCO (Q9KXP2) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 425

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 305 GGDTPGVAPPTSHPVLTVVAASDVHEAVVLP 213
           GGD   + P T+ PVL  V  +++H+A  LP
Sbjct: 78  GGDRLALRPETTAPVLRAVLEANLHKAGNLP 108



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>RFAY_XANCP (P46358) Probable RNA polymerase sigma factor rfaY|
          Length = 400

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 16/74 (21%)
 Frame = -2

Query: 302 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVG----------------VNGV 171
           G  PGVA  T+    T++AA     A +  G +  + GVG                  G 
Sbjct: 194 GSAPGVAFATTVTAATMLAAPGTASAAIALGGIGSLGGVGKLGASGLSGSALTSGSAAGA 253

Query: 170 LTVELQLPVGLAVL 129
           L+V L +P+ +A+L
Sbjct: 254 LSVLLGMPMAIALL 267



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>FBX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein 34-like)|
          Length = 603

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 186 YTRYDVQVSRKHNGLVHIRCRYNRKYWVARRRGD 287
           Y + DV + R H    H    Y R YW+  RR D
Sbjct: 537 YEKGDVSLCRWHPKPYHHDLPYGRSYWMCCRRAD 570



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>SMD3_SCHPO (Q9UUC6) Probable small nuclear ribonucleoprotein Sm D3 (snRNP core|
           protein D3) (Sm-D3)
          Length = 97

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +3

Query: 78  CIALRSQSNGCYLRYVHEHGETYRQLQLNGKDTINPYTRYDVQVSRKHNGLVHIRCRYNR 257
           CI L  ++ G  +    E+G TYR   +  +D +N   R D+ V+ +   + H+   Y R
Sbjct: 4   CIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMR-DISVTARDGRVSHLDQVYIR 62



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>FTRL_METKA (Q8TX60) Formylmethanofuran--tetrahydromethanopterin|
           formyltransferase-like protein
          Length = 300

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = -2

Query: 314 VCVGGDTP-----GVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQL 150
           VC  G  P      + P T+HP    +    +   V  P  ++ +P + +NGV    ++ 
Sbjct: 203 VCAAGSKPETIYPDIGPTTNHPYCPTLRDRILDSKV--PEGVEAIPEIVINGVSLDVVKR 260

Query: 149 PVGLAV 132
            +G+A+
Sbjct: 261 AIGIAI 266



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>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein|
           5.2) (Ultrahigh sulfur keratin-associated protein 5.2)
           (Keratin-associated protein 5-8) (Keratin-associated
           protein 5.8)
          Length = 177

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 255 GCSGIGCARGRCASGTLGRRTWCRG 181
           GC G G  RG C SG  G  + C G
Sbjct: 27  GCGGCGSGRGGCGSGCGGCSSSCGG 51



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>CHHA2_BOMMO (P05687) Chorion class high-cysteine HCA protein 12 precursor|
           (HC-A.12)
          Length = 124

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -1

Query: 255 GCSGIGCARGRCASGTLGRRTWC 187
           GC G GC  G C     GRR  C
Sbjct: 101 GCGGCGCGCGGCGGCGCGRRCCC 123



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>SYFA_FUSNN (Q8RHB4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 338

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 39  PAAAVVEEVELPSCIALRSQSNGCYLRYVHEHGETYRQL 155
           P+  + +   L   I LR+Q++   +RY+ EHG  +R +
Sbjct: 151 PSRDLTDTFYLNDSIVLRTQTSPVQIRYMLEHGTPFRMI 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,336,389
Number of Sequences: 219361
Number of extensions: 1065333
Number of successful extensions: 3713
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3711
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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