ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet52h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED ... 28 6.0
2GLUD1_MOUSE (Q8CIX8) Glutamate--ammonia ligase domain-containing... 28 7.9
3GLUD1_RAT (Q7TT51) Glutamate--ammonia ligase domain-containing p... 28 7.9

>DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED RESPONSE TO|
           GRAVITY) (AtARG1) (AtJ15) (AtDjB15)
          Length = 410

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 162 DNLAN*NILVARGKESKSDSRSSGERNGSSLNRE 263
           +NL+N +   A+G ESK D  S+GE  G+  NR+
Sbjct: 359 NNLSNGSSSKAQGDESKGDGDSAGEEGGTE-NRD 391



to top

>GLUD1_MOUSE (Q8CIX8) Glutamate--ammonia ligase domain-containing protein 1|
           (Lengsin) (Lens glutamine synthase-like)
          Length = 563

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 101 DLCLFSTPRSISSLATPFLVSGCLGIHRKPFL 6
           D C+F  P  I+S    F  S  L  H +PF+
Sbjct: 263 DFCIFGVPEVINSKTISFPASTLLSNHDQPFM 294



to top

>GLUD1_RAT (Q7TT51) Glutamate--ammonia ligase domain-containing protein 1|
           (Lengsin) (Lens glutamine synthase-like)
          Length = 561

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 101 DLCLFSTPRSISSLATPFLVSGCLGIHRKPFL 6
           D C+F  P  I+S    F  S  L  H +PF+
Sbjct: 261 DFCIFGVPEVINSKTISFPASTLLSNHDQPFM 292


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,291,372
Number of Sequences: 219361
Number of extensions: 628095
Number of successful extensions: 1398
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top