ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet52h01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EA92_VICFA (P21747) Embryonic abundant protein USP92 precursor 38 0.007
2EA30_VICFA (P21745) Embryonic abundant protein VF30.1 precursor 37 0.009
3RD22_ARATH (Q08298) Dehydration-responsive protein RD22 precursor 37 0.012
4SVF30_VICFA (P09059) Unknown seed protein 30.1 precursor (VF30.1) 36 0.027
5EA87_VICFA (P21746) Embryonic abundant protein USP87 precursor 36 0.027
6PPSA_MYCTU (Q10977) Phenolpthiocerol synthesis polyketide syntha... 31 0.68
7KLK9_HUMAN (Q9UKQ9) Kallikrein-9 precursor (EC 3.4.21.-) (Kallik... 31 0.88
8OSP4_PEA (P17771) Organ-specific protein P4 29 3.4
9XDH_EMENI (Q12553) Xanthine dehydrogenase (EC 1.17.1.4) (Purine ... 28 4.4
10DAZP2_MOUSE (Q9DCP9) DAZ-associated protein 2 (Deleted in azoosp... 28 4.4
11DAZP2_HUMAN (Q15038) DAZ-associated protein 2 (Deleted in azoosp... 28 4.4
12AMPD2_HUMAN (Q01433) AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase... 28 4.4
13ADA15_RAT (Q9QYV0) ADAM 15 precursor (EC 3.4.24.-) (A disintegri... 28 4.4
14EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... 28 5.7
15FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) ... 28 5.7
16RIR1_HUMAN (P23921) Ribonucleoside-diphosphate reductase large s... 28 7.5
17CIC_MOUSE (Q924A2) Protein capicua homolog 28 7.5
18OSS2_PEA (P17772) Organ-specific protein S2 28 7.5
19INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-) 28 7.5
20YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear pro... 28 7.5
21MMP11_HUMAN (P24347) Stromelysin-3 precursor (EC 3.4.24.-) (ST3)... 28 7.5
22ENK19_HUMAN (Q6ZVY0) HERV-K_4p16.1 provirus ancestral Env polypr... 28 7.5
23ODP2_MYCPN (P75392) Dihydrolipoyllysine-residue acetyltransferas... 27 9.8
24KAPR_USTMA (P49605) cAMP-dependent protein kinase regulatory sub... 27 9.8
25MYLK_HUMAN (Q15746) Myosin light chain kinase, smooth muscle and... 27 9.8
26PS1C2_HUMAN (Q9UIG4) Psoriasis susceptibility 1 candidate gene 2... 27 9.8

>EA92_VICFA (P21747) Embryonic abundant protein USP92 precursor|
          Length = 268

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 128 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 244
           +L+   +A VG  A  +   YW+S  PNTP+P + S LL
Sbjct: 8   VLSLFCLAFVGITATSSEEDYWQSIWPNTPLPKTFSDLL 46



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>EA30_VICFA (P21745) Embryonic abundant protein VF30.1 precursor|
          Length = 268

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 128 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 244
           +L+   +A VG  A  +   YW+S  PNTP+P + S LL
Sbjct: 8   VLSLFCLAFVGITATSSGEDYWQSIWPNTPLPKTFSDLL 46



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>RD22_ARATH (Q08298) Dehydration-responsive protein RD22 precursor|
          Length = 392

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +2

Query: 110 RLVAAGILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 244
           RL    +L   ++ ++   A   P +YW +ALPNTP+P+SL  LL
Sbjct: 4   RLPLICLLGSFMVVAIA--ADLTPERYWSTALPNTPIPNSLHNLL 46



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>SVF30_VICFA (P09059) Unknown seed protein 30.1 precursor (VF30.1)|
          Length = 268

 Score = 35.8 bits (81), Expect = 0.027
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 128 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQL 241
           +L+   +A VG  A  +   YW+S  PNTP+P + S L
Sbjct: 8   VLSLFCLAFVGITATSSGEDYWQSIWPNTPLPKTFSDL 45



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>EA87_VICFA (P21746) Embryonic abundant protein USP87 precursor|
          Length = 268

 Score = 35.8 bits (81), Expect = 0.027
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 128 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 244
           +L+   +A VG  A      YW+S  PNTP+P + S +L
Sbjct: 8   VLSLFCLAFVGITATSPREDYWQSIWPNTPLPKTFSDML 46



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>PPSA_MYCTU (Q10977) Phenolpthiocerol synthesis polyketide synthase ppsA|
          Length = 1876

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 119 AAGILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLLDTQ 253
           AAGI  F+       H    P Q++E+A P+ P      +++DTQ
Sbjct: 452 AAGIAGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQ 496



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>KLK9_HUMAN (Q9UKQ9) Kallikrein-9 precursor (EC 3.4.21.-) (Kallikrein-like|
           protein 3) (KLK-L3)
          Length = 250

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 167 HGFLPTRSVGRQECRLRRAYPWRAG 93
           HG+  TR++G +ECR   + PW+AG
Sbjct: 16  HGWADTRAIGAEECR-PNSQPWQAG 39



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>OSP4_PEA (P17771) Organ-specific protein P4|
          Length = 130

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 128 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLLD 247
           +  FL++A+V S   +  G+YW+  + +  MP  +  LLD
Sbjct: 13  LFLFLIVANVESR--KDVGEYWKLVMKDQDMPEEIQGLLD 50



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>XDH_EMENI (Q12553) Xanthine dehydrogenase (EC 1.17.1.4) (Purine hydroxylase|
           I)
          Length = 1363

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 24/86 (27%), Positives = 37/86 (43%)
 Frame = -1

Query: 324 PPGIPWPASTWTPPEPTFTDVPPACVSRS*ERELGMGVLGRADSQYCPGARAAWLPTDAI 145
           P G    AS  +   P F       V+RS ++E  + +     +Q+  G R+  LP DAI
Sbjct: 385 PAGNLATASPISDLNPVFVATNTTLVARSLDKETEIPM-----TQFFRGYRSTALPPDAI 439

Query: 144 SRKARMPAATSLSMEGRAEGSNEEAD 67
               R+P A+      RA   ++  D
Sbjct: 440 ISSLRIPTASEKGEYLRAYKQSKRKD 465



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>DAZP2_MOUSE (Q9DCP9) DAZ-associated protein 2 (Deleted in|
           azoospermia-associated protein 2) (Proline-rich protein
           expressed in brain)
          Length = 168

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 330 VVPPGIP-WPASTWTPPEPTFTDVPPA 253
           V PPG P +P +   P  P +TD PPA
Sbjct: 15  VQPPGNPVYPQTLHLPQAPPYTDAPPA 41



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>DAZP2_HUMAN (Q15038) DAZ-associated protein 2 (Deleted in|
           azoospermia-associated protein 2)
          Length = 168

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 330 VVPPGIP-WPASTWTPPEPTFTDVPPA 253
           V PPG P +P +   P  P +TD PPA
Sbjct: 15  VQPPGNPVYPQTLHLPQAPPYTDAPPA 41



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>AMPD2_HUMAN (Q01433) AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase isoform L)|
          Length = 879

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 137 RQECRLRRAYPWRAGQRAAMRKLTAGPSQCEDD 39
           R  C L ++ P  AG+R  +     GPS+C  D
Sbjct: 12  RSRCFLHQSLPLGAGRRKGLDVAEPGPSRCRSD 44



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>ADA15_RAT (Q9QYV0) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 15) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein 15) (MDC-15)
           (Metalloprotease RGD disintegrin protein) (Metargidin)
           (CRII-7)
          Length = 816

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +1

Query: 127 HSCLPTDRVGRKPC-SSCSGAILGVC-SSQHSH 219
           H C P D +G + C S C G   GVC SS+H H
Sbjct: 646 HRCQPVDLLGAQECRSKCHGH--GVCDSSRHCH 676



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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 324 PPGIPWPASTWTPPEPTFTDVPPA 253
           P   P P  T++PP PT++  PPA
Sbjct: 438 PAYSPPPPPTYSPPPPTYSPPPPA 461



 Score = 28.1 bits (61), Expect = 5.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 312 PWPASTWTPPEPTFTDVPPA 253
           P P+ T++PP PT++  PP+
Sbjct: 276 PQPSPTYSPPPPTYSPPPPS 295



 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 324 PPGIPWPASTWTPPEPTFTDVPP 256
           PP    P  T++PP PT+   PP
Sbjct: 406 PPTYSPPPPTYSPPPPTYAQPPP 428



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>FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) (Leukocyte|
           formin) (CLL-associated antigen KW-13)
          Length = 1100

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 22/67 (32%), Positives = 24/67 (35%)
 Frame = -1

Query: 324 PPGIPWPASTWTPPEPTFTDVPPACVSRS*ERELGMGVLGRADSQYCPGARAAWLPTDAI 145
           PPG   P     PP P     PP               LGR DS+  PG +A       I
Sbjct: 594 PPGTDGPVPPPPPPPPPPPGGPP-------------DALGRRDSELGPGVKA----KKPI 636

Query: 144 SRKARMP 124
             K RMP
Sbjct: 637 QTKFRMP 643



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>RIR1_HUMAN (P23921) Ribonucleoside-diphosphate reductase large subunit (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase M1
           subunit) (Ribonucleotide reductase large chain)
          Length = 792

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 264 VPPACVSRS*ERELGMGVLGRADS 193
           VP AC+S    R +G+GV G AD+
Sbjct: 488 VPEACLSNKRHRPIGIGVQGLADA 511



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>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
 Frame = -1

Query: 324  PPGIPWPASTWTPPEPTFTDVPPACVSRS*ERELGMGVLGRADSQYCPGARAAW-LPTDA 148
            PP  P P  TW PP    +  PP         E   G  G   +   P + + W +P   
Sbjct: 1226 PPAPPPPTETW-PPTARSSPPPPL------PAEERPGTKGPETASKFPSSSSDWRVPGLG 1278

Query: 147  ISRKARMPA----ATSLSMEGRAEGSNEEADGR 61
            +  +   P     A +    G + GS+E + GR
Sbjct: 1279 LESRGEPPTPPSPAPATGPSGSSSGSSEGSSGR 1311



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>OSS2_PEA (P17772) Organ-specific protein S2|
          Length = 181

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 137 FLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLLD 247
           FLL+      + +  G+YW+  + +  MP  +  LLD
Sbjct: 13  FLLLIVANVESRKDVGEYWKLVMKDQDMPEEIQGLLD 49



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>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)|
          Length = 1708

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 327 VPPGIPWPASTWTPPEPTFTDVP 259
           +P  +P PA+T TP  PT   VP
Sbjct: 208 LPEALPGPATTITPAPPTLAPVP 230



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>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
           (ZAP113)
          Length = 1951

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 324 PPGIPWPA-STWTPPEPTFTDVPPACVSRS 238
           PPGIP P      PP+ T   VPPA  S+S
Sbjct: 435 PPGIPPPGVPQGIPPQLTAAPVPPASSSQS 464



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>MMP11_HUMAN (P24347) Stromelysin-3 precursor (EC 3.4.24.-) (ST3) (SL-3) (Matrix|
           metalloproteinase-11) (MMP-11)
          Length = 488

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 164 HAARAPGQYWESALPNTPMPSSLSQ 238
           HA R   Q W +ALP++P P+  +Q
Sbjct: 42  HAERRGPQPWHAALPSSPAPAPATQ 66



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>ENK19_HUMAN (Q6ZVY0) HERV-K_4p16.1 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) [Includes: Truncated surface
           protein (SU)]
          Length = 342

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = -2

Query: 233 RGSLAWECWEE-----QTPSIAPEHELHGFLPTRSVGRQECRLRRAYPWRAGQR 87
           RG L ++C  +     Q PS+ P +  +    T+ + +   RL   YPW+ G++
Sbjct: 268 RGQLYYDCMGQTHSCSQAPSVWPTNLAYDGDLTKRLDQVYRRLESPYPWKWGEK 321



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>ODP2_MYCPN (P75392) Dihydrolipoyllysine-residue acetyltransferase component of|
           pyruvate dehydrogenase complex (EC 2.3.1.12) (E2)
           (Dihydrolipoamide acetyltransferase component of
           pyruvate dehydrogenase complex)
          Length = 402

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = -1

Query: 321 PGIPWPASTWTP-PEPTFTDVPPACVSRS*ERELGMGVLG 205
           P  P P S   P P PTFT  P    +     E G  V+G
Sbjct: 85  PAAPQPVSAPAPAPTPTFTPTPAPVTTEPVVEEAGASVVG 124



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>KAPR_USTMA (P49605) cAMP-dependent protein kinase regulatory subunit (PKA|
           regulatory subunit)
          Length = 522

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 24/90 (26%), Positives = 36/90 (40%)
 Frame = -1

Query: 324 PPGIPWPASTWTPPEPTFTDVPPACVSRS*ERELGMGVLGRADSQYCPGARAAWLPTDAI 145
           P   P PA+   P  P     P + +        G G    +++ + P       PT  +
Sbjct: 120 PDSTPAPATPAAPAAPAAPAAPFSSLG-------GSGSTSISNAAFIP-------PTFNL 165

Query: 144 SRKARMPAATSLSMEGRAEGSNEEADGRPL 55
            R+      TS+S E  A  +N E+DG PL
Sbjct: 166 GRR------TSVSAESMAPQANAESDGSPL 189



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>MYLK_HUMAN (Q15746) Myosin light chain kinase, smooth muscle and non-muscle|
           isozymes (EC 2.7.11.18) (MLCK) [Contains: Telokin
           (Kinase-related protein) (KRP)]
          Length = 1914

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 122 LRRAYPWRAGQRAAMRKLTAGPSQCEDDLLAQ 27
           L++  PW AGQ   + K   G   C+  L+ Q
Sbjct: 781 LKKVQPWHAGQYEILLKNRVGECSCQVSLMLQ 812



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>PS1C2_HUMAN (Q9UIG4) Psoriasis susceptibility 1 candidate gene 2 protein|
           precursor (SPR1 protein)
          Length = 136

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 327 VPPGIPWPASTWTPPEPTFTDVPPACVSR 241
           +P G P P   W    P F D PP   SR
Sbjct: 43  LPQGPPVPGDPWPGAPPLFEDPPPTRPSR 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,116,796
Number of Sequences: 219361
Number of extensions: 875483
Number of successful extensions: 3046
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3032
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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