ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet52g05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DC1L1_RAT (Q9QXU8) Cytoplasmic dynein 1 light intermediate chain... 28 6.4

>DC1L1_RAT (Q9QXU8) Cytoplasmic dynein 1 light intermediate chain 1 (Dynein|
           light intermediate chain 1, cytosolic) (Dynein light
           chain A) (DLC-A)
          Length = 523

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 79  ARSAMANSFLSMKTGPAAGASEASQALLESDLRELTMAAR 198
           A   +AN   S   GPAAG  E  Q L    LRE++  +R
Sbjct: 22  ASGPLANELASGSGGPAAGDDEDGQNLWSRILREVSTRSR 61


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.127    0.339 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,133,232
Number of Sequences: 219361
Number of extensions: 143297
Number of successful extensions: 331
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 80,573,946
effective HSP length: 51
effective length of database: 69,386,535
effective search space used: 1665276840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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