ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet52g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atpe... 32 0.44
2PER30_ARATH (Q9LSY7) Peroxidase 30 precursor (EC 1.11.1.7) (Atpe... 31 0.99
3PER12_ARATH (Q96520) Peroxidase 12 precursor (EC 1.11.1.7) (Atpe... 29 2.9
4PER59_ARATH (Q39034) Peroxidase 59 precursor (EC 1.11.1.7) (Atpe... 29 3.7
5PER14_ARATH (Q9SI17) Peroxidase 14 precursor (EC 1.11.1.7) (Atpe... 28 4.9
6PER72_ARATH (Q9FJZ9) Peroxidase 72 precursor (EC 1.11.1.7) (Atpe... 28 4.9
7PER36_ARATH (Q9SD46) Peroxidase 36 precursor (EC 1.11.1.7) (Atpe... 28 4.9
8PER28_ARATH (Q9SS67) Peroxidase 28 precursor (EC 1.11.1.7) (Atpe... 28 6.4
9PER15_ARATH (Q9SI16) Peroxidase 15 precursor (EC 1.11.1.7) (Atpe... 28 8.3
10TNAP3_MACFA (Q4R8W3) Tumor necrosis factor, alpha-induced protei... 28 8.3
11TNAP3_HUMAN (P21580) Tumor necrosis factor, alpha-induced protei... 28 8.3
12PER3_ARATH (O23044) Peroxidase 3 precursor (EC 1.11.1.7) (Atpero... 28 8.3

>PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atperox P55)|
           (ATP20a)
          Length = 330

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 141 QLSPNFHAATCPDLERIVEFHVAETFRRDV 230
           QLS N++A+TCP +E IV+  V   F++ V
Sbjct: 31  QLSENYYASTCPSVELIVKQAVTTKFKQTV 60



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>PER30_ARATH (Q9LSY7) Peroxidase 30 precursor (EC 1.11.1.7) (Atperox P30)|
           (PRXR9) (ATP7a)
          Length = 329

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 135 EGQLSPNFHAATCPDLERIVEFHV 206
           E QL  NF+A +CP+ E+I+  H+
Sbjct: 26  EAQLQMNFYAKSCPNAEKIISDHI 49



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>PER12_ARATH (Q96520) Peroxidase 12 precursor (EC 1.11.1.7) (Atperox P12)|
           (PRXR6) (ATP4a)
          Length = 358

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 144 LSPNFHAATCPDLERIVEFHVAETFRRDV 230
           LS NF+   CP +E I+   + + F+RD+
Sbjct: 44  LSWNFYQKACPKVENIIRKELKKVFKRDI 72



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>PER59_ARATH (Q39034) Peroxidase 59 precursor (EC 1.11.1.7) (Atperox P59)|
           (Peroxidase N) (ATPN)
          Length = 328

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 141 QLSPNFHAATCPDLERIVEFHVAETFRRDV 230
           QLSP+ +A +CP+L +IV   VA   + ++
Sbjct: 29  QLSPDIYAKSCPNLVQIVRKQVAIALKAEI 58



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>PER14_ARATH (Q9SI17) Peroxidase 14 precursor (EC 1.11.1.7) (Atperox P14)|
          Length = 337

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 144 LSPNFHAATCPDLERIVEFHVAETFRRD 227
           L P+F+ ++CP  E IV   VA+ F R+
Sbjct: 35  LFPDFYRSSCPRAEEIVRSVVAKAFERE 62



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>PER72_ARATH (Q9FJZ9) Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72)|
           (PRXR8) (ATP6a)
          Length = 336

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 138 GQLSPNFHAATCPDLERIVEFHVAETFRRD 227
           G L P F+  +CP  + IV+  VA+ F  D
Sbjct: 31  GYLFPQFYDQSCPKAQEIVQSIVAKAFEHD 60



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>PER36_ARATH (Q9SD46) Peroxidase 36 precursor (EC 1.11.1.7) (Atperox P36)|
          Length = 336

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 144 LSPNFHAATCPDLERIVEFHVAETFRRD 227
           LSP F+  +CP+ + IV+ +VA  +  D
Sbjct: 33  LSPQFYENSCPNAQAIVQSYVANAYFND 60



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>PER28_ARATH (Q9SS67) Peroxidase 28 precursor (EC 1.11.1.7) (Atperox P28)|
           (ATP39)
          Length = 321

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 141 QLSPNFHAATCPDLERIVEFHVAETFRRD 227
           QL   F++ +CP+ E IVE  V + F RD
Sbjct: 22  QLKFKFYSESCPNAETIVENLVRQQFARD 50



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>PER15_ARATH (Q9SI16) Peroxidase 15 precursor (EC 1.11.1.7) (Atperox P15)|
           (ATP36)
          Length = 338

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 135 EGQLSPNFHAATCPDLERIVEFHVAETFRRD 227
           +G L P F+ ++CP  E IV   VA+   R+
Sbjct: 33  KGNLFPGFYRSSCPRAEEIVRSVVAKAVARE 63



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>TNAP3_MACFA (Q4R8W3) Tumor necrosis factor, alpha-induced protein 3 (EC|
           3.-.-.-)
          Length = 790

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 176 GPGAHRGVPRRRDVPARR 229
           GPGAHRG P   D P +R
Sbjct: 744 GPGAHRGEPAPEDPPKQR 761



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>TNAP3_HUMAN (P21580) Tumor necrosis factor, alpha-induced protein 3 (EC|
           3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger
           protein A20)
          Length = 790

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 176 GPGAHRGVPRRRDVPARR 229
           GPGAHRG P   D P +R
Sbjct: 744 GPGAHRGEPAPEDPPKQR 761



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>PER3_ARATH (O23044) Peroxidase 3 precursor (EC 1.11.1.7) (Atperox P3) (Rare|
           cold-inducible protein) (RCI3A) (ATPRC)
          Length = 326

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +3

Query: 135 EGQLSPNFHAATCPDLERIVEFHVA 209
           + QL  NF+A +CP+ E+IV+  V+
Sbjct: 23  QAQLQMNFYANSCPNAEKIVQDFVS 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,707,083
Number of Sequences: 219361
Number of extensions: 247564
Number of successful extensions: 999
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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