ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet52f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 529 e-147
2emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein 224 1e-55
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 123 3e-25
4dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 123 3e-25
5dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 3e-25
6dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 3e-25
7gb|AY105365.1| Zea mays PCO092487 mRNA sequence 103 3e-19
8gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase h... 103 3e-19
9gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase h... 103 3e-19
10gb|BT014685.1| Oryza sativa AK104912 mRNA sequence 96 7e-17
11emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransgly... 96 7e-17
12dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 96 7e-17
13dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
14dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
15gb|AY103891.1| Zea mays PCO065722 mRNA sequence 94 3e-16
16gb|AY103775.1| Zea mays PCO076979 mRNA sequence 94 3e-16
17dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
18gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence 90 5e-15
19gb|AY106776.1| Zea mays PCO076978 mRNA sequence 90 5e-15
20gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase ... 88 2e-14
21dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 7e-14
22dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan en... 80 4e-12
23dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan en... 66 7e-08
24ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predic... 62 1e-06
25emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 62 1e-06
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
27dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
28ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANS... 56 6e-05
29emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, ... 56 6e-05
30emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, B... 56 6e-05
31gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, ... 56 6e-05
32gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotrans... 56 6e-05
33gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, ... 56 6e-05
34emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein 44 0.24
35emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransgl... 44 0.24
36gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase ... 44 0.24
37gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's ... 42 0.96
38gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 0.96
39gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotran... 42 0.96
40ref|XM_479512.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.8
41ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.8
42ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.8
43gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 3.8
44gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, comp... 40 3.8
45gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 3.8
46gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, com... 40 3.8
47emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 3.8
48emb|X66125.1|OSPER O.sativa mRNA for peroxidase 40 3.8
49emb|AJ421977.1|SMA421977 Stenotrophomonas maltophilia partial pa... 40 3.8
50emb|AJ421975.1|SMA421975 Stenotrophomonas maltophilia partial pa... 40 3.8
51emb|AJ421974.1|SMA421974 Stenotrophomonas maltophilia partial pa... 40 3.8
52emb|AJ421973.1|SMA421973 Stenotrophomonas maltophilia partial pa... 40 3.8
53emb|BX276114.6| Zebrafish DNA sequence from clone CH211-176L11 i... 40 3.8
54gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 3.8
55gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 3.8
56gb|AE012271.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 3.8
57gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 3.8
58gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 3.8
59gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR syntheta... 40 3.8
60dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
61dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
62dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8
63dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8
64dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8
65emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 3.8
66tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 3.8
67gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 3.8
68gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, c... 40 3.8
69emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on ch... 40 3.8
70gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosom... 40 3.8 
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEA)
          Length = 1174

 Score =  529 bits (267), Expect = e-147
 Identities = 267/267 (100%)
 Strand = Plus / Plus

                                                                       
Query: 24  tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 83
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 60

                                                                       
Query: 84  ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 120

                                                                       
Query: 144 aaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 180

                                                                       
Query: 204 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 240

                                      
Query: 264 ttcggcaagatcgacatgcagctcaag 290
           |||||||||||||||||||||||||||
Sbjct: 241 ttcggcaagatcgacatgcagctcaag 267
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>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein
          Length = 1187

 Score =  224 bits (113), Expect = 1e-55
 Identities = 196/223 (87%), Gaps = 3/223 (1%)
 Strand = Plus / Plus

                                                                       
Query: 71  catggctcgcatgggggcgtcggtgctttcgatcctgctcgcctcttgcgccct---ggc 127
           |||||||||||||| || |||||||||  |||||||||| || ||||| ||| |   |||
Sbjct: 123 catggctcgcatggcggtgtcggtgctggcgatcctgctggcgtcttgtgccgttgcggc 182

                                                                       
Query: 128 ggcggcgagcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcct 187
           |||||||||||||||||||||||||||| | || ||||| ||||| || || ||||||||
Sbjct: 183 ggcggcgagcttcgacaaggagttcgacatcacgtggggcgacggccgtggaaagatcct 242

                                                                       
Query: 188 caacaacggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtc 247
           |||||| || ||||||||||| ||||| |||||||||  |||||| ||||||||||||||
Sbjct: 243 caacaatgggcagctcctgaccctggggctggacaagacctccgggtccgggttccagtc 302

                                                      
Query: 248 caagcacgagtacctcttcggcaagatcgacatgcagctcaag 290
           ||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 303 caagcgcgagtacctcttcggcaagatcgacatgcaactcaag 345
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  123 bits (62), Expect = 3e-25
 Identities = 125/146 (85%)
 Strand = Plus / Minus

                                                                            
Query: 145      aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 204
                ||||||||||| | |||||||| || || || |||||||||||| |  | |||||||| |
Sbjct: 28774036 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 28773977

                                                                            
Query: 205      tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 264
                |||||||    ||||||| |   |||||||| ||||||||||||||||||||||||||||
Sbjct: 28773976 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 28773917

                                          
Query: 265      tcggcaagatcgacatgcagctcaag 290
                 |||||||||||||||||||||||||
Sbjct: 28773916 acggcaagatcgacatgcagctcaag 28773891



 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                            
Query: 227      ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
                ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |
Sbjct: 28749713 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 28749772

                    
Query: 287      caag 290
                ||||
Sbjct: 28749773 caag 28749776



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 90/102 (88%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                            
Query: 162      tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 221
                ||||| ||||| |||||||||||||||  ||||||||||||||||||||||   ||||||
Sbjct: 28761428 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 28761487

                                                          
Query: 222      aaggtc-tccggctccgggttccagtccaagcacgagtacct 262
                 ||||| ||||||||||| |||||||||||| || |||||||
Sbjct: 28761488 -aggtcgtccggctccggcttccagtccaagaaccagtacct 28761528
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score =  123 bits (62), Expect = 3e-25
 Identities = 125/146 (85%)
 Strand = Plus / Minus

                                                                         
Query: 145   aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 204
             ||||||||||| | |||||||| || || || |||||||||||| |  | |||||||| |
Sbjct: 81811 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 81752

                                                                         
Query: 205   tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 264
             |||||||    ||||||| |   |||||||| ||||||||||||||||||||||||||||
Sbjct: 81751 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 81692

                                       
Query: 265   tcggcaagatcgacatgcagctcaag 290
              |||||||||||||||||||||||||
Sbjct: 81691 acggcaagatcgacatgcagctcaag 81666



 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                         
Query: 227   ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
             ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |
Sbjct: 57488 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 57547

                 
Query: 287   caag 290
             ||||
Sbjct: 57548 caag 57551



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 90/102 (88%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                         
Query: 162   tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 221
             ||||| ||||| |||||||||||||||  ||||||||||||||||||||||   ||||||
Sbjct: 69203 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 69262

                                                       
Query: 222   aaggtc-tccggctccgggttccagtccaagcacgagtacct 262
              ||||| ||||||||||| |||||||||||| || |||||||
Sbjct: 69263 -aggtcgtccggctccggcttccagtccaagaaccagtacct 69303
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>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full
           insert sequence
          Length = 566

 Score =  123 bits (62), Expect = 3e-25
 Identities = 125/146 (85%)
 Strand = Plus / Plus

                                                                       
Query: 145 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 204
           ||||||||||| | |||||||| || || || |||||||||||| |  | |||||||| |
Sbjct: 196 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 255

                                                                       
Query: 205 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 264
           |||||||    ||||||| |   |||||||| ||||||||||||||||||||||||||||
Sbjct: 256 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 315

                                     
Query: 265 tcggcaagatcgacatgcagctcaag 290
            |||||||||||||||||||||||||
Sbjct: 316 acggcaagatcgacatgcagctcaag 341
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>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
           insert sequence
          Length = 1253

 Score =  123 bits (62), Expect = 3e-25
 Identities = 125/146 (85%)
 Strand = Plus / Plus

                                                                       
Query: 145 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 204
           ||||||||||| | |||||||| || || || |||||||||||| |  | |||||||| |
Sbjct: 186 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 245

                                                                       
Query: 205 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 264
           |||||||    ||||||| |   |||||||| ||||||||||||||||||||||||||||
Sbjct: 246 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 305

                                     
Query: 265 tcggcaagatcgacatgcagctcaag 290
            |||||||||||||||||||||||||
Sbjct: 306 acggcaagatcgacatgcagctcaag 331
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>gb|AY105365.1| Zea mays PCO092487 mRNA sequence
          Length = 1253

 Score =  103 bits (52), Expect = 3e-19
 Identities = 112/132 (84%)
 Strand = Plus / Plus

                                                                       
Query: 159 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 218
           |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    ||
Sbjct: 204 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 263

                                                                       
Query: 219 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 278
           |||| |  ||||||||| || ||||||||||||  | ||||||||| ||||    |||||
Sbjct: 264 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 323

                       
Query: 279 atgcagctcaag 290
           ||||||||||||
Sbjct: 324 atgcagctcaag 335
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>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete
           cds
          Length = 1827

 Score =  103 bits (52), Expect = 3e-19
 Identities = 112/132 (84%)
 Strand = Plus / Plus

                                                                       
Query: 159 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 218
           |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    ||
Sbjct: 94  acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 153

                                                                       
Query: 219 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 278
           |||| |  ||||||||| || ||||||||||||  | ||||||||| ||||    |||||
Sbjct: 154 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 213

                       
Query: 279 atgcagctcaag 290
           ||||||||||||
Sbjct: 214 atgcagctcaag 225
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>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete
           cds
          Length = 1221

 Score =  103 bits (52), Expect = 3e-19
 Identities = 112/132 (84%)
 Strand = Plus / Plus

                                                                       
Query: 159 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 218
           |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    ||
Sbjct: 211 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 270

                                                                       
Query: 219 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 278
           |||| |  ||||||||| || ||||||||||||  | ||||||||| ||||    |||||
Sbjct: 271 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 330

                       
Query: 279 atgcagctcaag 290
           ||||||||||||
Sbjct: 331 atgcagctcaag 342
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>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence
          Length = 807

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                       
Query: 227 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
           ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |
Sbjct: 153 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 212

               
Query: 287 caag 290
           ||||
Sbjct: 213 caag 216
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>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEB)
          Length = 1226

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                       
Query: 227 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
           |||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |
Sbjct: 265 ctccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 324

               
Query: 287 caag 290
           ||||
Sbjct: 325 caag 328
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0622F03
          Length = 170064

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                          
Query: 227    ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
              ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |
Sbjct: 150279 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 150338

                  
Query: 287    caag 290
              ||||
Sbjct: 150339 caag 150342



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 90/102 (88%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                          
Query: 162    tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 221
              ||||| ||||| |||||||||||||||  ||||||||||||||||||||||   ||||||
Sbjct: 161994 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 162053

                                                        
Query: 222    aaggtc-tccggctccgggttccagtccaagcacgagtacct 262
               ||||| ||||||||||| |||||||||||| || |||||||
Sbjct: 162054 -aggtcgtccggctccggcttccagtccaagaaccagtacct 162094
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>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
           insert sequence
          Length = 1208

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                       
Query: 227 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
           ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |
Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320

               
Query: 287 caag 290
           ||||
Sbjct: 321 caag 324
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>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
           insert sequence
          Length = 1208

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                       
Query: 227 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
           ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |
Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320

               
Query: 287 caag 290
           ||||
Sbjct: 321 caag 324
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>gb|AY103891.1| Zea mays PCO065722 mRNA sequence
          Length = 1280

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                       
Query: 228 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 287
           ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| ||
Sbjct: 292 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 351

              
Query: 288 aag 290
           |||
Sbjct: 352 aag 354
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>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 228 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
           |||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||
Sbjct: 309 tccggctccgggttccagtcccggcacgagtacctgttcggcaagatcgacatgcagct 367
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>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full
           insert sequence
          Length = 1101

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 90/102 (88%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                       
Query: 162 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 221
           ||||| ||||| |||||||||||||||  ||||||||||||||||||||||   ||||||
Sbjct: 194 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 253

                                                     
Query: 222 aaggtc-tccggctccgggttccagtccaagcacgagtacct 262
            ||||| ||||||||||| |||||||||||| || |||||||
Sbjct: 254 -aggtcgtccggctccggcttccagtccaagaaccagtacct 294
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>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence
          Length = 977

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                       
Query: 216 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 275
           ||||||| || |||||| |||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 936 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 877

                    
Query: 276 gacatgcag 284
           || ||||||
Sbjct: 876 gagatgcag 868
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>gb|AY106776.1| Zea mays PCO076978 mRNA sequence
          Length = 974

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 216 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 275
           ||||||| || |||||| |||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 268 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 327

                    
Query: 276 gacatgcag 284
           || ||||||
Sbjct: 328 gagatgcag 336
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>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA,
           complete cds
          Length = 1056

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                       
Query: 227 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
           |||||||||||| ||||||||||||  ||| ||||||||||||||||||||||||||| |
Sbjct: 159 ctccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagat 218

               
Query: 287 caag 290
           ||||
Sbjct: 219 caag 222
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>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full
           insert sequence
          Length = 634

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 227 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 281
           ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 251 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatg 305
to top
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan
           endotransglucosylase/hydrolase, complete cds
          Length = 1273

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                       
Query: 227 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 286
           |||||||||||| |||||||||||| |||||||||||| ||||||| |||| |||||| |
Sbjct: 322 ctccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagat 381

               
Query: 287 caag 290
           ||||
Sbjct: 382 caag 385
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>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan
           endotransglucosylase/hydrolase, complete cds
          Length = 1181

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 120/149 (80%)
 Strand = Plus / Plus

                                                                       
Query: 135 agcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaac 194
           |||||| |||| || |||||| | ||||||||||| || || || |||||||| ||||||
Sbjct: 316 agcttcaacaacgatttcgacatcacctggggtgatggccgggggaagatcctaaacaac 375

                                                                       
Query: 195 ggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtccaagcac 254
           ||||||||||| |  ||    ||||||||   ||||||||| ||||| || || ||  ||
Sbjct: 376 ggccagctcctcagcctctccctggacaaaacctccggctcagggtttcaatctaaaaac 435

                                        
Query: 255 gagtacctcttcggcaagatcgacatgca 283
            |||||||||| ||||| |||||||||||
Sbjct: 436 cagtacctctttggcaacatcgacatgca 464
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>ref|XM_473793.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 966

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 227 ctccggctccgggttccagtccaagcacgagtacctcttcggc 269
           ||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 210 ctccggctccgggttccagtccaaggaccagttcctcttcggc 252
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>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
             complete sequence
          Length = 129037

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 227   ctccggctccgggttccagtccaagcacgagtacctcttcggc 269
             ||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 32995 ctccggctccgggttccagtccaaggaccagttcctcttcggc 32953
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 227      ctccggctccgggttccagtccaagcacgagtacctcttcggc 269
                ||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 30557287 ctccggctccgggttccagtccaaggaccagttcctcttcggc 30557245
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>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full
           insert sequence
          Length = 1234

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 227 ctccggctccgggttccagtccaagcacgagtacctcttcggc 269
           ||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 278 ctccggctccgggttccagtccaaggaccagttcctcttcggc 320
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>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9);
           hydrolase, acting on glycosyl bonds / hydrolase,
           hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA,
           complete cds
          Length = 1089

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 219 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 278
           ||||||||||||||||| || || || |||||| | |||||| | || || |||||||||
Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280

                       
Query: 279 atgcagctcaag 290
           ||| ||||||||
Sbjct: 281 atgaagctcaag 292
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>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64
          Length = 196286

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 219   gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 278
             ||||||||||||||||| || || || |||||| | |||||| | || || |||||||||
Sbjct: 18979 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 19038

                         
Query: 279   atgcagctcaag 290
             ||| ||||||||
Sbjct: 19039 atgaagctcaag 19050
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>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project)
          Length = 91228

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 219   gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 278
             ||||||||||||||||| || || || |||||| | |||||| | || || |||||||||
Sbjct: 27900 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 27959

                         
Query: 279   atgcagctcaag 290
             ||| ||||||||
Sbjct: 27960 atgaagctcaag 27971
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>gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase
           (At4g25820) mRNA, complete cds
          Length = 1068

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 219 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 278
           ||||||||||||||||| || || || |||||| | |||||| | || || |||||||||
Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280

                       
Query: 279 atgcagctcaag 290
           ||| ||||||||
Sbjct: 281 atgaagctcaag 292
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>gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotransglycosylase (XTR9) mRNA,
           complete cds
          Length = 1100

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 219 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 278
           ||||||||||||||||| || || || |||||| | |||||| | || || |||||||||
Sbjct: 210 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 269

                       
Query: 279 atgcagctcaag 290
           ||| ||||||||
Sbjct: 270 atgaagctcaag 281
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>gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase
           (At4g25820) mRNA, complete cds
          Length = 901

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 219 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 278
           ||||||||||||||||| || || || |||||| | |||||| | || || |||||||||
Sbjct: 169 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 228

                       
Query: 279 atgcagctcaag 290
           ||| ||||||||
Sbjct: 229 atgaagctcaag 240
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>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein
          Length = 1189

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 228 tccggctccgggttccagtccaagcacgagtacctcttcggc 269
           ||||||||||| ||| | |||||| || ||||||||||||||
Sbjct: 229 tccggctccggcttcaaatccaagaacaagtacctcttcggc 270
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>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
          Length = 1110

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 228 tccggctccgggttccagtccaagcacgagtacctcttcggc 269
           ||||||||||| ||| ||||||||  | ||||||||||||||
Sbjct: 212 tccggctccggcttcaagtccaaggccaagtacctcttcggc 253
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>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA,
           complete cds
          Length = 1100

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 228 tccggctccgggttccagtccaagcacgagtacctcttcggc 269
           ||||||||||| ||| ||||||||  | ||||||||||||||
Sbjct: 221 tccggctccggcttcaagtccaaggccaagtacctcttcggc 262
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>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 236843

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 232   gctccgggttccagtccaagcacga 256
             ||||||||||||||||| |||||||
Sbjct: 90144 gctccgggttccagtcccagcacga 90120
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 266    cggcaagatcgacatgcagctcaag 290
              ||||||||||||||||||| |||||
Sbjct: 511026 cggcaagatcgacatgcagatcaag 511050
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>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2)
           mRNA, complete cds
          Length = 1375

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 222 aaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 281
           |||| ||| ||||| || ||| |||| | ||||||||| || || || |||||||| |||
Sbjct: 207 aaggcctcgggctcgggcttcgagtctacgcacgagtatctatttggtaagatcgatatg 266

                    
Query: 282 cagctcaag 290
           |||||||||
Sbjct: 267 cagctcaag 275
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>ref|XM_479512.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1287

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
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>ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113
           mRNA
          Length = 1304

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 232 ggctcgcatgggggcgtcgctgct 255
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>ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113
           mRNA
          Length = 1291

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 234 ggctcgcatgggggcgtcgctgct 257
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    gcgcggcaagatcctcaaca 192
              ||||||||||||||||||||
Sbjct: 578416 gcgcggcaagatcctcaaca 578435
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>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence
          Length = 171861

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 231    ggctccgggttccagtccaagcac 254
              ||||||||||||||| ||||||||
Sbjct: 108026 ggctccgggttccagcccaagcac 108003
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>gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 227
            of 256 of the complete sequence
          Length = 11399

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 130  cggcgagcttcgacaaggagttcg 153
            ||||||||||||||||||| ||||
Sbjct: 4271 cggcgagcttcgacaaggatttcg 4294
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>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence
          Length = 195587

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 231   ggctccgggttccagtccaagcac 254
             ||||||||||||||| ||||||||
Sbjct: 17463 ggctccgggttccagcccaagcac 17440
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     gcgcggcaagatcctcaaca 192
               ||||||||||||||||||||
Sbjct: 1970047 gcgcggcaagatcctcaaca 1970028
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>emb|X66125.1|OSPER O.sativa mRNA for peroxidase
          Length = 1287

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 183 ggctcgcatgggggcgtcgctgct 206
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>emb|AJ421977.1|SMA421977 Stenotrophomonas maltophilia partial parE gene for topoisomerase
           IV, strain sm199
          Length = 480

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gcgcggcaagatcctcaaca 192
           ||||||||||||||||||||
Sbjct: 129 gcgcggcaagatcctcaaca 148
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>emb|AJ421975.1|SMA421975 Stenotrophomonas maltophilia partial parE gene for topoisomerase
           IV, strain sm8
          Length = 480

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gcgcggcaagatcctcaaca 192
           ||||||||||||||||||||
Sbjct: 129 gcgcggcaagatcctcaaca 148
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>emb|AJ421974.1|SMA421974 Stenotrophomonas maltophilia partial parE gene for topoisomerase
           IV, strain sm117
          Length = 480

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gcgcggcaagatcctcaaca 192
           ||||||||||||||||||||
Sbjct: 129 gcgcggcaagatcctcaaca 148
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>emb|AJ421973.1|SMA421973 Stenotrophomonas maltophilia partial parE gene for topoisomerase
           IV, strain sm98
          Length = 480

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gcgcggcaagatcctcaaca 192
           ||||||||||||||||||||
Sbjct: 129 gcgcggcaagatcctcaaca 148
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>emb|BX276114.6| Zebrafish DNA sequence from clone CH211-176L11 in linkage group 20
            Contains the kit gene for kit receptor, the 3' end of the
            pdgfra gene for platelet derived growth factor receptor
            alpha and a CpG island, complete sequence
          Length = 134212

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    tcacacaaacacaagtttcc 22
            ||||||||||||||||||||
Sbjct: 4921 tcacacaaacacaagtttcc 4902
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    gcgcggcaagatcctcaaca 192
              ||||||||||||||||||||
Sbjct: 636185 gcgcggcaagatcctcaaca 636204
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    gcgcggcaagatcctcaaca 192
              ||||||||||||||||||||
Sbjct: 338395 gcgcggcaagatcctcaaca 338376
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>gb|AE012271.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 179
            of 460 of the complete genome
          Length = 10028

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  gcgcggcaagatcctcaaca 192
            ||||||||||||||||||||
Sbjct: 1720 gcgcggcaagatcctcaaca 1701
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 130     cggcgagcttcgacaaggagttcg 153
               ||||||||||||||||||| ||||
Sbjct: 2519732 cggcgagcttcgacaaggatttcg 2519755
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 173     gcgcggcaagatcctcaaca 192
               ||||||||||||||||||||
Sbjct: 3067621 gcgcggcaagatcctcaaca 3067640
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>gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR synthetase (purC) gene, partial
           cds; and TetR family bacterial regulatory protein
           (ameR), membrane fusion protein (ameA), multidrug efflux
           transporter RND family protein (ameB), and outer
           membrane protein (ameC) genes, complete cds
          Length = 7277

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 130 cggcgagcttcgacaaggagttcg 153
           ||||||||||||||||||| ||||
Sbjct: 119 cggcgagcttcgacaaggatttcg 142
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 74       ggctcgcatgggggcgtcggtgct 97
                ||||||||||||||||||| ||||
Sbjct: 28620405 ggctcgcatgggggcgtcgctgct 28620428
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>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1167_G06
          Length = 112386

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    ggctcgcatgggggcgtcggtgct 97
             ||||||||||||||||||| ||||
Sbjct: 86363 ggctcgcatgggggcgtcgctgct 86386
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>dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F01, full
           insert sequence
          Length = 1287

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
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>dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K12, full
           insert sequence
          Length = 1290

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 233 ggctcgcatgggggcgtcgctgct 256
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>dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C17, full
           insert sequence
          Length = 1303

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 231 ggctcgcatgggggcgtcgctgct 254
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     gcgcggcaagatcctcaaca 192
               ||||||||||||||||||||
Sbjct: 5273940 gcgcggcaagatcctcaaca 5273921
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>tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx111 gene
           for class III peroxidase 111 precursor, exons 1-4
          Length = 1250

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 162 ggctcgcatgggggcgtcgctgct 185
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     gcgcggcaagatcctcaaca 192
               ||||||||||||||||||||
Sbjct: 5587812 gcgcggcaagatcctcaaca 5587793
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>gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, complete cds
          Length = 1306

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 205 ggctcgcatgggggcgtcgctgct 228
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>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete
             sequence
          Length = 192913

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ccatccagcattctcagacc 40
             ||||||||||||||||||||
Sbjct: 68495 ccatccagcattctcagacc 68514
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>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence
          Length = 219361

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ccatccagcattctcagacc 40
             ||||||||||||||||||||
Sbjct: 56171 ccatccagcattctcagacc 56190


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,948,890
Number of Sequences: 3902068
Number of extensions: 1948890
Number of successful extensions: 35878
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35436
Number of HSP's gapped (non-prelim): 431
length of query: 290
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 268
effective length of database: 17,147,199,772
effective search space: 4595449538896
effective search space used: 4595449538896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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