Clone Information

BLAST Search Result

Clone Name	baet52d10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	118	4e-27
2	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	116	2e-26
3	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	114	8e-26
4	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	112	2e-25
5	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	106	1e-23
6	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	105	2e-23
7	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	105	3e-23
8	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	105	4e-23
9	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	99	2e-21
10	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	99	2e-21
11	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	98	4e-21
12	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	98	4e-21
13	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	97	8e-21
14	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	97	8e-21
15	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	97	1e-20
16	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	96	2e-20
17	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	96	2e-20
18	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	96	2e-20
19	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	96	2e-20
20	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	96	3e-20
21	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	95	4e-20
22	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	94	6e-20
23	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	94	8e-20
24	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	94	1e-19
25	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	93	1e-19
26	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	93	2e-19
27	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	92	2e-19
28	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	92	2e-19
29	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	92	2e-19
30	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	92	4e-19
31	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	92	4e-19
32	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	91	5e-19
33	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	91	9e-19
34	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	91	9e-19
35	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	87	1e-17
36	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	81	7e-16
37	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	80	1e-15
38	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	78	6e-15
39	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	75	3e-14
40	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	74	7e-14
41	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	74	9e-14
42	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	74	9e-14
43	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	74	9e-14
44	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	73	2e-13
45	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	73	2e-13
46	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	73	2e-13
47	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	71	6e-13
48	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	71	8e-13
49	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	70	1e-12
50	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	67	8e-12
51	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	66	2e-11
52	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	64	9e-11
53	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	63	2e-10
54	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	58	7e-09
55	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	56	2e-08
56	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	52	3e-07
57	CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl...	42	5e-04
58	CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...	42	5e-04
59	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	40	0.001
60	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	37	0.009
61	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	33	0.23
62	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	31	0.67
63	CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...	31	0.88
64	CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...	31	0.88
65	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	31	0.88
66	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	30	1.1
67	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	29	2.5
68	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	29	2.5
69	O11H6_HUMAN (Q8NGC7) Olfactory receptor 11H6 (Olfactory receptor...	29	2.5
70	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	29	2.5
71	PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5...	29	3.3
72	GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	3.3
73	GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	5.7
74	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	28	5.7
75	GLNA_SUIBO (Q8J1R3) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	5.7
76	PROB_SILPO (Q5LRY5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut...	27	9.7
77	HUR_STRAU (Q00923) Hydroxyurea phosphotransferase (EC 2.7.-.-) (...	27	9.7

>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  118 bits (295), Expect = 4e-27
 Identities = 54/67 (80%), Positives = 56/67 (83%)
 Frame = +1

Query: 133 GTPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 312
           GTP+K      FGEGRITMRKT GKPKVAAS SPWYG DRV YLGP SG+PPSYLTGEFP
Sbjct: 15  GTPIKVGS---FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 71

Query: 313 GDYGWDT 333
           GDYGWDT
Sbjct: 72  GDYGWDT 78

to top

>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  116 bits (290), Expect = 2e-26
 Identities = 54/68 (79%), Positives = 59/68 (86%), Gaps = 2/68 (2%)
 Frame = +1

Query: 136 TPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEF 309
           +P  A +AA   FGEGRITMRK+A KPK AAS SPWYG+DRVLYLGPLSG+PPSYLTGEF
Sbjct: 10  SPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEF 69

Query: 310 PGDYGWDT 333
           PGDYGWDT
Sbjct: 70  PGDYGWDT 77

to top

>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  114 bits (284), Expect = 8e-26
 Identities = 53/67 (79%), Positives = 55/67 (82%)
 Frame = +1

Query: 133 GTPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 312
           G P   +R   FGEGRITMRKTA KPK A S SPWYG+DRVLYLGPLSG PPSYLTGEFP
Sbjct: 15  GKPAAGTRDV-FGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFP 73

Query: 313 GDYGWDT 333
           GDYGWDT
Sbjct: 74  GDYGWDT 80

to top

>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  112 bits (280), Expect = 2e-25
 Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 7/73 (9%)
 Frame = +1

Query: 136 TPVKASRAAP------FGEGRITMRKTAGKPKVAASS-SPWYGSDRVLYLGPLSGDPPSY 294
           +PV A RAAP      FGE RITMRKTA KPK AASS SPWYG+DRVLYLGPLSG+PPSY
Sbjct: 10  SPVMA-RAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSY 68

Query: 295 LTGEFPGDYGWDT 333
           LTGEFPGDYGWDT
Sbjct: 69  LTGEFPGDYGWDT 81

to top

>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  106 bits (265), Expect = 1e-23
 Identities = 47/55 (85%), Positives = 48/55 (87%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           GEGRITMRKTAGKPK   SSSPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 29  GEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83

to top

>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  105 bits (263), Expect = 2e-23
 Identities = 49/57 (85%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
 Frame = +1

Query: 166 FGEGRITMRKTAGKPKVAASS-SPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           FGE R+TMRKTA K K AASS SPWYG DRVLYLGPLSG+PPSYLTGEFPGDYGWDT
Sbjct: 25  FGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81

to top

>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  105 bits (262), Expect = 3e-23
 Identities = 48/60 (80%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
 Frame = +1

Query: 157 AAPFGEGRITMRKTAGKPK-VAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           ++ FGE R+TMRKTA K K  AAS SPWYG DRVLYLGPLSG+PPSYLTGEFPGDYGWDT
Sbjct: 22  SSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81

to top

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  105 bits (261), Expect = 4e-23
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = +1

Query: 157 AAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           +A  G+ R+ MRKTA K K  +SSSPWYGSDRVLYLGPLSG+PPSYLTGEFPGDYGWDT
Sbjct: 24  SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 82

to top

>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 45/56 (80%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAAS-SSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           GE R+TMRK  GK  VAAS  SPWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDT
Sbjct: 39  GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 94

to top

>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 49/69 (71%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
 Frame = +1

Query: 133 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306
           G  VK S AA    G GR+TMRKT  KPK   S SPWYGSDRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPAASEVLGSGRVTMRKTVAKPK-GPSGSPWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 307 FPGDYGWDT 333
           FPGDYGWDT
Sbjct: 74  FPGDYGWDT 82

to top

>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 48/69 (69%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
 Frame = +1

Query: 133 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306
           G  VK S +AP   G GR++MRKT  KP   ASSSPWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 307 FPGDYGWDT 333
           FPGDYGWDT
Sbjct: 73  FPGDYGWDT 81

to top

>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 43/55 (78%), Positives = 46/55 (83%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G GR+TMRKTA K K A+S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 29  GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83

to top

>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 43/56 (76%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAAS-SSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           GE R+TMRK  G+  VAAS  SPWYG DRV+YLGP SG+PPSYLTGEFPGDYGWDT
Sbjct: 39  GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDT 94

to top

>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 48/69 (69%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
 Frame = +1

Query: 133 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306
           G  V  S AA    G GR+TMRKT  KPK   S SPWYGSDRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVNLSPAASEVLGSGRVTMRKTVAKPK-GPSGSPWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 307 FPGDYGWDT 333
           FPGDYGWDT
Sbjct: 74  FPGDYGWDT 82

to top

>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 41/55 (74%), Positives = 45/55 (81%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G G++TMRKTA K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 29  GNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83

to top

>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 41/55 (74%), Positives = 45/55 (81%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G G++TMRKTA K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 28  GNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82

to top

>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 41/55 (74%), Positives = 45/55 (81%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G G++TMRKTA K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 28  GNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82

to top

>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 49/69 (71%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
 Frame = +1

Query: 133 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306
           G  VK S  A   FG GR+TMRKT  KP    S SPWYGSDRV YLGP SG+PPSYLTGE
Sbjct: 15  GKAVKLSPGASEVFGTGRVTMRKTV-KP-TGPSGSPWYGSDRVKYLGPFSGEPPSYLTGE 72

Query: 307 FPGDYGWDT 333
           FPGDYGWDT
Sbjct: 73  FPGDYGWDT 81

to top

>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 41/55 (74%), Positives = 46/55 (83%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G G++TMRKTA K K  +SSSPWYG +RV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 29  GNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDT 83

to top

>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 44/60 (73%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = +1

Query: 157 AAPFGEGRITMRK-TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           A   GE R+TMRK T  K   +AS+SPWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDT
Sbjct: 31  AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90

to top

>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
 Frame = +1

Query: 133 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306
           G  VK S ++    G G++TMRKT  K K A+SSSPWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 307 FPGDYGWDT 333
           FP DYGWDT
Sbjct: 75  FPSDYGWDT 83

to top

>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 94.4 bits (233), Expect = 6e-20
 Identities = 45/70 (64%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
 Frame = +1

Query: 133 GTPVKASR---AAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTG 303
           G PV+ S    +   G  R TMRK+A   KVA+S SPWYG DRV YLGP SG+ PSYLTG
Sbjct: 15  GKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTG 74

Query: 304 EFPGDYGWDT 333
           EFPGDYGWDT
Sbjct: 75  EFPGDYGWDT 84

to top

>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 94.0 bits (232), Expect = 8e-20
 Identities = 41/55 (74%), Positives = 44/55 (80%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G G+ TMRKTA K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 29  GNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83

to top

>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 40/55 (72%), Positives = 44/55 (80%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G G++TMRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 29  GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83

to top

>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 44/63 (69%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = +1

Query: 148 ASRAAP-FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 324
           AS + P  G GR++MRKTA K    +S SPWYG DRV YLGP SG+PPSYLTGEFPGDYG
Sbjct: 1   ASPSTPQLGVGRVSMRKTASK--TVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYG 58

Query: 325 WDT 333
           WDT
Sbjct: 59  WDT 61

to top

>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 41/55 (74%), Positives = 44/55 (80%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G  R TMRK+A   KVA+S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 31  GAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 85

to top

>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 46/69 (66%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
 Frame = +1

Query: 133 GTPVKASRAAPF--GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306
           G  VK S  AP   G  + TMRKTA K    +S SPWYG DRV YLGP SG+PPSYLTGE
Sbjct: 5   GQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62

Query: 307 FPGDYGWDT 333
           FPGDYGWDT
Sbjct: 63  FPGDYGWDT 71

to top

>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 40/55 (72%), Positives = 43/55 (78%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G G+ TMRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 28  GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 82

to top

>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 40/55 (72%), Positives = 43/55 (78%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G G+ TMRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 29  GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83

to top

>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 39/53 (73%), Positives = 43/53 (81%)
 Frame = +1

Query: 175 GRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G++TMRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 30  GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 82

to top

>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 47/69 (68%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
 Frame = +1

Query: 133 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306
           G  VK S +A    G GRITMRK   K   A SSSPWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKS--APSSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 307 FPGDYGWDT 333
           FPGDYGWDT
Sbjct: 73  FPGDYGWDT 81

to top

>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 44/68 (64%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
 Frame = +1

Query: 145 KASRAAP-----FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEF 309
           KA + AP     FG GR++MRKT   P    S SPWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 16  KAVKVAPSSSELFGNGRVSMRKTVKAP---VSDSPWYGPDRVKYLGPFSGEAPSYLTGEF 72

Query: 310 PGDYGWDT 333
           PGDYGWDT
Sbjct: 73  PGDYGWDT 80

to top

>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 90.5 bits (223), Expect = 9e-19
 Identities = 43/69 (62%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
 Frame = +1

Query: 133 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306
           G  VK S ++    G G+  MRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 307 FPGDYGWDT 333
           FPGDYGWDT
Sbjct: 75  FPGDYGWDT 83

to top

>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 90.5 bits (223), Expect = 9e-19
 Identities = 44/67 (65%), Positives = 49/67 (73%)
 Frame = +1

Query: 133 GTPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 312
           G  VK   +AP   GR++MRKT  K    +S SPWYG DRV YLGP SG+PPSYLTGEFP
Sbjct: 16  GKAVKLGPSAP-EVGRVSMRKTVTKQ--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 72

Query: 313 GDYGWDT 333
           GDYGWDT
Sbjct: 73  GDYGWDT 79

to top

>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 39/55 (70%), Positives = 43/55 (78%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G+ R++MRKTA   KV    SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 29  GDARVSMRKTAATKKVG---SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 80

to top

>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 80.9 bits (198), Expect = 7e-16
 Identities = 39/61 (63%), Positives = 41/61 (67%)
 Frame = +1

Query: 151 SRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 330
           SR    GE R+ M     K   A S S WYGSDR LYLGP SG PPSYL+GEFPGDYGWD
Sbjct: 24  SRKVGAGEARVQMMAPKSK---APSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWD 80

Query: 331 T 333
           T
Sbjct: 81  T 81

to top

>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 38/56 (67%), Positives = 40/56 (71%)
 Frame = +1

Query: 166 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           FGEGRITMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 30  FGEGRITMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 81

to top

>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 33/41 (80%), Positives = 36/41 (87%)
 Frame = +1

Query: 211 KVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           KVA+SSSPW+G D V YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 4   KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDT 44

to top

>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 36/56 (64%), Positives = 38/56 (67%)
 Frame = +1

Query: 166 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           FG GR TMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 30  FGGGRATMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 81

to top

>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 74.3 bits (181), Expect = 7e-14
 Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = +1

Query: 133 GTPVKASRAAP-FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEF 309
           G  +K + + P  G GR++MRKTA  PK  +S SPWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 15  GQAMKLAPSTPELGVGRVSMRKTA--PKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 72

Query: 310 PG 315
            G
Sbjct: 73  HG 74

to top

>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 35/56 (62%), Positives = 38/56 (67%)
 Frame = +1

Query: 166 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           FG+ R TMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 30  FGQARFTMRRTVK----SAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDT 81

to top

>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 35/56 (62%), Positives = 38/56 (67%)
 Frame = +1

Query: 166 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           F  GR+TMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 2   FEGGRVTMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 53

to top

>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = +1

Query: 172 EGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           E R+TMR+T  K   A S + WYG+DR  +LGP SG+ PSYL GEF GDYGWDT
Sbjct: 33  EARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDT 84

to top

>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 35/53 (66%), Positives = 37/53 (69%)
 Frame = +1

Query: 175 GRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           GRITMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 31  GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 79

to top

>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 35/56 (62%), Positives = 37/56 (66%)
 Frame = +1

Query: 166 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           F  GR TMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 30  FNGGRATMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 81

to top

>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 34/55 (61%), Positives = 39/55 (70%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G GR++MR+T      +A +S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 31  GGGRVSMRRTVK----SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDT 81

to top

>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 34/54 (62%), Positives = 37/54 (68%)
 Frame = +1

Query: 172 EGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           + RITMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 33  QARITMRRTVR----SAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDT 82

to top

>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 70.9 bits (172), Expect = 8e-13
 Identities = 33/53 (62%), Positives = 37/53 (69%)
 Frame = +1

Query: 175 GRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           GR++MR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 32  GRVSMRRTIK----SAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 80

to top

>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 33/60 (55%), Positives = 38/60 (63%)
 Frame = +1

Query: 154 RAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           R     +GR +MR+T      A   S WYG+DR  +LGP S   PSYLTGEFPGDYGWDT
Sbjct: 25  RKVGVSDGRFSMRRTVK----AVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDT 80

to top

>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 28/44 (63%), Positives = 30/44 (68%)
 Frame = +1

Query: 202 GKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G  +   S+  WYG DRV YLGP S   PSYL GEFPGDYGWDT
Sbjct: 36  GSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDT 79

to top

>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
 Frame = +1

Query: 148 ASRAA----PF--GEGRITMRK------TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPS 291
           ASRA     PF  G+GR            A   ++   +  WYG DRV YLGP S   PS
Sbjct: 9   ASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPS 68

Query: 292 YLTGEFPGDYGWDT 333
           YL GEFPGDYGWDT
Sbjct: 69  YLNGEFPGDYGWDT 82

to top

>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = +1

Query: 184 TMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           TM K A K KV++S+       RV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 40  TMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85

to top

>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
 Frame = +1

Query: 190 RKTAGKPKVAASSSP-----WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           +K AG  +  A+ +      WYG DR  +LGP S + P+YLTGEFPGDYGWDT
Sbjct: 19  KKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDT 71

to top

>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = +1

Query: 148 ASRAAPFGEGRITMRKTAGKPKVAASSS-PWYGSDRVLYLGPLSGDP-PSYLTGEFPGDY 321
           ASR A     + T +KTA K     SS   +YG +R  +LGP S +  P+YLTGEFPGDY
Sbjct: 6   ASRKALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDY 65

Query: 322 GWDT 333
           GWDT
Sbjct: 66  GWDT 69

to top

>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 25/41 (60%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
 Frame = +1

Query: 214 VAASSSPWYGSDRVLYLGPLS-GDPPSYLTGEFPGDYGWDT 333
           V  ++  +YG DR  +LGP S  D P YLTGEFPGDYGWDT
Sbjct: 26  VPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDT 66

to top

>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +1

Query: 268 PLSGDPPSYLTGEFPGDYGWDT 333
           P SG+PPSYLTGEFPGDYGWDT
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDT 22

to top

>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPW 237
           G GRITMRKTA KPK A+S SPW
Sbjct: 29  GNGRITMRKTAAKPKPASSGSPW 51

to top

>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +1

Query: 169 GEGRITMRKTAGKPKVAASSSPW 237
           G GRITMRKTA KPK A+S SPW
Sbjct: 29  GNGRITMRKTAAKPKPASSGSPW 51

to top

>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +1

Query: 175 GRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333
           G+ T +      K ++S++ +YG D       L    P   TGEFPGDYGWDT
Sbjct: 37  GKSTKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDT 88

to top

>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +1

Query: 136 TPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYL--GPLS-GDPPSYLTGE 306
           +P      A F + +    K+    + +   + WYG DR ++L  G L   + P YL GE
Sbjct: 29  SPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 88

Query: 307 FPGDYGWD 330
             GDYG+D
Sbjct: 89  VAGDYGYD 96

to top

>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = +1

Query: 133 GTPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 312
           G+ V  ++A+  G  R+ + K +  P   ++++    +D    L      PP +L G  P
Sbjct: 24  GSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLP 83

Query: 313 GDYGWD 330
           GD+G+D
Sbjct: 84  GDFGFD 89

to top

>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +1

Query: 133 GTPVKASRAAPFGEGRITMRK---TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTG 303
           G+ V A++A+  G  R+ + K     G   VA S+      DR L+       PP +L G
Sbjct: 24  GSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVA-ADPDRPLWFP--GSTPPEWLDG 80

Query: 304 EFPGDYGWD 330
             PGD+G+D
Sbjct: 81  SLPGDFGFD 89

to top

>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 133 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPW 237
           G  VK S +A    G GRITMRK   K   A SSSPW
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKS--APSSSPW 49

to top

>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 133 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPW 237
           G  VK S +A    G GRITMRK   K   A SSSPW
Sbjct: 15  GQAVKLSPSASENSGNGRITMRKAVAKS--APSSSPW 49

to top

>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = +1

Query: 142 VKASRAAPF---GEGRITMRKTAGKPKVAA--SSSPWYGSDRVL-YLGPLSGDPPSYLTG 303
           +  +R AP    G GR T     GK K A   S+     +DR L Y G +S   P +L G
Sbjct: 14  IMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAIS---PDWLDG 70

Query: 304 EFPGDYGWD 330
              GDYG+D
Sbjct: 71  SLVGDYGFD 79

to top

>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = +1

Query: 205 KPKVAASSSPWYGSDRVLYLGPLSGD------PPSYLTGEFPGDYGWDT 333
           K K AA+   + G+   +    +S D       PSYL G  PGD+G+D+
Sbjct: 23  KSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDS 71

to top

>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 274 SGDPPSYLTGEFPGDYGWD 330
           + +PP+ LTGE+P D G+D
Sbjct: 193 NAEPPALLTGEYPADRGFD 211

to top

>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +1

Query: 178 RITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 330
           R T R   G  K +   +    SDR L+        P YL G   GDYG+D
Sbjct: 28  RFTARFGFGTKKASPKKAKTVISDRPLWFP--GAKSPEYLDGSLVGDYGFD 76

to top

>O11H6_HUMAN (Q8NGC7) Olfactory receptor 11H6 (Olfactory receptor OR14-35)|
          Length = 330

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 142 VKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDP 285
           ++A    P G GR     T G   +  S   +YG+  V+Y+ P SG+P
Sbjct: 240 IRAVLCIPSGAGRTKAFSTCGSHLMVVSL--FYGTLMVMYVSPTSGNP 285

to top

>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +1

Query: 283 PPSYLTGEFPGDYGWD 330
           PP++LTGE+P D G+D
Sbjct: 168 PPAHLTGEYPADRGFD 183

to top

>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor|
          Length = 1901

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 87   DGGRGDHGALLPGDGRHPGEGLQGGA 164
            DGG    GA +PGDG   G G  GGA
Sbjct: 1292 DGGNAGFGAGVPGDGGIGGTGGAGGA 1317



 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 87   DGGRGDHGAL-LPGDGRHPGEGLQGG 161
            DGG GD GAL   G+G   G+G QGG
Sbjct: 1623 DGGAGDSGALSQDGNGFAGGQGGQGG 1648



 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 87   DGGRGDHGAL-LPGDGRHPGEGLQGG 161
            DGG GD GAL   G+G   G+G QGG
Sbjct: 1418 DGGAGDSGALSQDGNGFAGGQGGQGG 1443

to top

>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 354

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 196 TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 324
           TA   ++A    PW+G ++   L    G P  +  G FPG  G
Sbjct: 112 TAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154

to top

>GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 358

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 232 PWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 324
           PW+G ++   L  L G+P  +  G FPG  G
Sbjct: 128 PWFGLEQEYTLFDLYGNPYGWPKGGFPGPQG 158

to top

>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 190 RKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 330
           RK +   + A++     G++R L+    S    SYL G  PGD+G+D
Sbjct: 33  RKASFVVRAASTPPVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFD 77

to top

>GLNA_SUIBO (Q8J1R3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 354

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 214 VAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 324
           +A  S PW+G ++   L    G P  +  G FPG  G
Sbjct: 118 LAKDSVPWFGLEQEYTLFDADGTPFGWPKGGFPGPQG 154

to top

>PROB_SILPO (Q5LRY5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 368

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 87  DGGRGDHGALLPGDGRHPGEGL 152
           D GRGD  A+L  DGR  G+GL
Sbjct: 308 DFGRGDPVAILGPDGRRLGQGL 329

to top

>HUR_STRAU (Q00923) Hydroxyurea phosphotransferase (EC 2.7.-.-) (Hydroxyurea|
           resistance protein)
          Length = 340

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 24/89 (26%)
 Frame = +1

Query: 133 GTPVKASRAAPFGEGRITMRKTAGKPKVAA-------------------SSSPWYGSDRV 255
           G P  A R A  GE R+     A   +VAA                      PW   D  
Sbjct: 201 GVPEAAGRLADAGERRLLRDCAAALAEVAAEPGDRLLHWDLHFGNVLAGEREPWLAIDP- 259

Query: 256 LYLGPLSGDP-----PSYLTGEFPGDYGW 327
               PL+GDP     P+ + G   G+ GW
Sbjct: 260 ---KPLAGDPGFELLPALVNGFRAGEVGW 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.137    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,085,024
Number of Sequences: 219361
Number of extensions: 428341
Number of successful extensions: 1703
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result