ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet52d10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 244 bits (123), Expect = 2e-61 Identities = 159/171 (92%) Strand = Plus / Plus Query: 164 ccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgt 223 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 956 ccttcggcgagggccgcatcaccatgcgcaagaccgtgggcaagcccaaggtggcggcgt 1015 Query: 224 ccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacc 283 || ||||||| ||||||||| |||||||||| ||||||||||| |||||||||| | Sbjct: 1016 ccggcagcccctggtacggccccgaccgcgtcaagtacctcggccccttctccggcgagc 1075 Query: 284 ccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 ccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 1126 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 103 accatggcgctctcctccccggcgatggccggcacccc 140 ||||||||| |||||||| ||||||||||||||||||| Sbjct: 904 accatggcgatctcctccacggcgatggccggcacccc 941
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 232 bits (117), Expect = 6e-58 Identities = 162/177 (91%) Strand = Plus / Plus Query: 158 cggcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtgg 217 |||||| |||||| |||| ||| |||||||||||||||| |||| |||| ||||| || Sbjct: 134 cggcgctcttcggggaggcgcgcgtcaccatgcgcaagaccgcggccaaggccaagccgg 193 Query: 218 cggcgtccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccg 277 | ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 194 tgtcgtccggcagcccgtggtacgggtccgaccgcgtgctctacctcggcccgctctccg 253 Query: 278 gcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 254 gcgaccccccgagctacctcaccggcgagttccccggcgactacgggtgggacaccg 310
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 208 bits (105), Expect = 8e-51 Identities = 153/169 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 64 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 123 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 124 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 183 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 184 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccg 232
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 208 bits (105), Expect = 8e-51 Identities = 153/169 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 23603607 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 23603666 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 23603667 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 23603726 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 23603727 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccg 23603775 Score = 202 bits (102), Expect = 5e-49 Identities = 155/172 (90%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 30024410 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 30024469 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 30024470 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 30024529 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30024530 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccg 30024581 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 37443416 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37443369 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 37443372 ccggtgagttccccggctactacggctg 37443345
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 208 bits (105), Expect = 8e-51 Identities = 153/169 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 66306 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 66365 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 66366 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 66425 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 66426 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccg 66474
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 208 bits (105), Expect = 8e-51 Identities = 153/169 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 135 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 194 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 195 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 254 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 255 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccg 303
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 208 bits (105), Expect = 8e-51 Identities = 153/169 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 134 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 193 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 194 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 253 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 254 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccg 302
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 202 bits (102), Expect = 5e-49 Identities = 155/172 (90%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 73 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 132 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 133 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 192 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccg 244
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 202 bits (102), Expect = 5e-49 Identities = 155/172 (90%), Gaps = 3/172 (1%) Strand = Plus / Minus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 14601 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 14542 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 14541 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 14482 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14481 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccg 14430
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 202 bits (102), Expect = 5e-49 Identities = 155/172 (90%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 20400 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 20459 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20460 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 20519 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20520 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccg 20571
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 202 bits (102), Expect = 5e-49 Identities = 155/172 (90%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 154 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 213 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 214 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 273 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccg 325
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 202 bits (102), Expect = 5e-49 Identities = 155/172 (90%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 154 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 213 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 214 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 273 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccg 325
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 202 bits (102), Expect = 5e-49 Identities = 155/172 (90%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 156 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 215 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 216 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 275 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccg 327
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 202 bits (102), Expect = 5e-49 Identities = 155/172 (90%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 156 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 215 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 216 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 275 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccg 327
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 194 bits (98), Expect = 1e-46 Identities = 154/172 (89%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 115 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 174 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 175 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 234 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || ||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 235 ccgccgtcctacctcaccggcgagttctccggcgactacggctgggacaccg 286
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 174 bits (88), Expect = 1e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 10793051 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 10793110 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 10793111 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcc 10793170 Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 10793171 ggcgagccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccg 10793228 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 10792987 ggccgcggccaccatggcgctctcctccccggtgatggcc 10793026
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 174 bits (88), Expect = 1e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 16774 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 16833 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 16834 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcc 16893 Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 16894 ggcgagccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccg 16951 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 16710 ggccgcggccaccatggcgctctcctccccggtgatggcc 16749
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 174 bits (88), Expect = 1e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 129669 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 129728 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 129729 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcc 129788 Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 129789 ggcgagccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccg 129846 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 129605 ggccgcggccaccatggcgctctcctccccggtgatggcc 129644
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 174 bits (88), Expect = 1e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 119 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 178 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 179 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcc 238 Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 239 ggcgagccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccg 296 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 55 ggccgcggccaccatggcgctctcctccccggtgatggcc 94
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 174 bits (88), Expect = 1e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 124 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 183 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 184 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcc 243 Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 244 ggcgagccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccg 301 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 60 ggccgcggccaccatggcgctctcctccccggtgatggcc 99
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 174 bits (88), Expect = 1e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 126 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 185 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 186 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcc 245 Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 246 ggcgagccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccg 303 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 62 ggccgcggccaccatggcgctctcctccccggtgatggcc 101
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 174 bits (88), Expect = 1e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 124 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 183 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 184 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcc 243 Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 244 ggcgagccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccg 301 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 60 ggccgcggccaccatggcgctctcctccccggtgatggcc 99
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 174 bits (88), Expect = 1e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 124 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 183 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 184 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcc 243 Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 244 ggcgagccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccg 301 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 60 ggccgcggccaccatggcgctctcctccccggtgatggcc 99
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 174 bits (88), Expect = 1e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 105 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 164 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 165 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcc 224 Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 225 ggcgagccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccg 282 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 41 ggccgcggccaccatggcgctctcctccccggtgatggcc 80
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 172 bits (87), Expect = 5e-40 Identities = 154/175 (88%), Gaps = 6/175 (3%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||| |||||||||||||||||| |||||| ||||||||| | ||| || Sbjct: 558 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 617 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccg---gc 279 || | ||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 618 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggccgc 677 Query: 280 gaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || || ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 678 gagccgccgagctacctgaccggcgagttccccggcgactacgggtgggacaccg 732
>emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMWG0701.uni Length = 312 Score = 168 bits (85), Expect = 7e-39 Identities = 142/160 (88%), Gaps = 7/160 (4%) Strand = Plus / Plus Query: 175 ggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtccagcagcccg 234 ||||||||||||||||||||||| |||| |||||| || | |||||||||||| Sbjct: 132 ggccgcatcaccatgcgcaagaccgcgg------ccaaggctgccacctccagcagcccg 185 Query: 235 tggtacggctccgaccgcgtgctctacctcggcccgctctccggcgaccccccgagctac 294 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 186 tggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccgagctac 245 Query: 295 ctcaccggcgagttccccggcgactacggctgggacaccg 334 |||| ||||||||| || ||||| |||||||||||||||| Sbjct: 246 ctcagcggcgagtt-ccgggcgattacggctgggacaccg 284 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 101 cgaccatggcgctctcctccccggcgatg 129 |||||||||||||||||||||| |||||| Sbjct: 70 cgaccatggcgctctcctcccccgcgatg 98
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 165 bits (83), Expect = 1e-37 Identities = 151/173 (87%), Gaps = 3/173 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcg-- 222 ||||||||||| |||| | || |||||||||||||||| ||| | ||| ||||||| Sbjct: 84 cttcggcgaggcccgcgtgacgatgcgcaagacggcggcgaaggcaaagccggcggcgag 143 Query: 223 -tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 ||| ||||||||||||||||| ||||||||||||||||||| ||||| || |||||||| Sbjct: 144 ctccggcagcccgtggtacggccccgaccgcgtgctctacctgggcccactgtccggcga 203 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||||||||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 204 gcccccgagctacctgacgggcgagttcccgggcgactacggctgggacaccg 256
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 163 bits (82), Expect = 4e-37 Identities = 148/170 (87%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||||||||||||||||||||||||| || | |||||||||| |||| || Sbjct: 1998 cttcggcgagggccgcatcaccatgcgcaagaccgccgccaagcccaagccggcgcgctc 2057 Query: 225 cagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgaccc 284 | ||||||| |||||||| |||||||||| || ||||| |||||||| |||||| || Sbjct: 2058 cggcagcccctggtacggtgccgaccgcgtcctgtacctgggcccgctgtccggctcacc 2117 Query: 285 cccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2118 tccgagctacctgaccggcgagttccccggcgactacgggtgggacaccg 2167
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 159 bits (80), Expect = 7e-36 Identities = 151/174 (86%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 164 ccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcgg 220 |||||||||||| |||| | || |||||||||||||||| ||| ||||| | ||||| Sbjct: 135 ccttcggcgaggcccgcgtgacgatgcgcaagacggcggcgaaggccaagccagcggcgg 194 Query: 221 cgtccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcg 280 ||||| | ||||||||||||||| ||||||||||||| ||||| ||||| || ||||||| Sbjct: 195 cgtccgggagcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcg 254 Query: 281 accccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 | || ||||||||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 255 agccgccgagctacctgacgggcgagttcccgggcgactacggctgggacaccg 308
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 153 bits (77), Expect = 4e-34 Identities = 156/181 (86%), Gaps = 6/181 (3%) Strand = Plus / Plus Query: 160 gcgcccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcg 219 |||| ||||||||||| || ||||||||||||||||| || | ||||||||| |||| Sbjct: 513 gcgctcttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcg 572 Query: 220 gcgtcca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctcc 276 ||||| | ||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 573 gcgtcgtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcg 632 Query: 277 ggc---gaccccccgagctacctcaccggcgagttccccggcgactacggctgggacacc 333 ||| || || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 633 ggccgcgagccgccgagctacctcaccggcgagttccccggcgactacgggtgggacacc 692 Query: 334 g 334 | Sbjct: 693 g 693 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 449 ggccgcggccaccatggcgctctcctccccggtgatggcc 488
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 145 bits (73), Expect = 1e-31 Identities = 132/151 (87%), Gaps = 3/151 (1%) Strand = Plus / Plus Query: 187 atgcgcaagacggcgggcaagcccaag---gtggcggcgtccagcagcccgtggtacggc 243 |||||||||||||||| ||| ||||| | |||||||||| | ||||||||||||||| Sbjct: 1106 atgcgcaagacggcggcgaaggccaagccagcggcggcgtccgggagcccgtggtacggc 1165 Query: 244 tccgaccgcgtgctctacctcggcccgctctccggcgaccccccgagctacctcaccggc 303 ||||||||||||| ||||| ||||| || |||||||| || ||||||||||| || ||| Sbjct: 1166 cccgaccgcgtgctgtacctgggcccactgtccggcgagccgccgagctacctgacgggc 1225 Query: 304 gagttccccggcgactacggctgggacaccg 334 |||||||| |||||||||||||||||||||| Sbjct: 1226 gagttcccgggcgactacggctgggacaccg 1256
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 145 bits (73), Expect = 1e-31 Identities = 132/151 (87%), Gaps = 3/151 (1%) Strand = Plus / Plus Query: 187 atgcgcaagacggcgggcaagcccaag---gtggcggcgtccagcagcccgtggtacggc 243 |||||||||||||||| ||| ||||| | |||||||||| | ||||||||||||||| Sbjct: 1106 atgcgcaagacggcggcgaaggccaagccagcggcggcgtccgggagcccgtggtacggc 1165 Query: 244 tccgaccgcgtgctctacctcggcccgctctccggcgaccccccgagctacctcaccggc 303 ||||||||||||| ||||| ||||| || |||||||| || ||||||||||| || ||| Sbjct: 1166 cccgaccgcgtgctgtacctgggcccactgtccggcgagccgccgagctacctgacgggc 1225 Query: 304 gagttccccggcgactacggctgggacaccg 334 |||||||| |||||||||||||||||||||| Sbjct: 1226 gagttcccgggcgactacggctgggacaccg 1256
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 123 bits (62), Expect = 4e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 221 cgtccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcg 280 |||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 334 cgtcgagcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttccggcg 393 Query: 281 accccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 | ||||| |||||| | || || ||||||||||| ||||| || |||||||||| Sbjct: 394 agccccccagctacttgactggtgagttccccggtgactatgggtgggacaccg 447
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 115 bits (58), Expect = 9e-23 Identities = 100/114 (87%) Strand = Plus / Plus Query: 221 cgtccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcg 280 |||| |||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||| Sbjct: 129 cgtcgagcagcccgtggtacggctctgaccgtgtgctctacctcggctcgctttccggcg 188 Query: 281 accccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 | ||||| |||||| | || || ||||||||||| ||||| || |||||||||| Sbjct: 189 aaccccccagctacttgactggtgagttccccggtgactatgggtgggacaccg 242
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 168 cggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtccag 227 |||||| || ||| |||| ||||||||||| || | |||||||||| || ||||| | Sbjct: 135 cggcgacggacgcttcacgatgcgcaagaccgccgccaagcccaagacggtctcgtccgg 194 Query: 228 cagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccccc 287 |||||||||||||||| | ||||| || |||||||||||| |||||||||| |||| Sbjct: 195 cagcccgtggtacggcccggaccgtgtcaagtacctcggcccgttctccggcgaggcccc 254 Query: 288 gagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 255 atcatacctcaccggcgaattccccggcgactacgggtgggacaccg 301
>gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein (CAB) mRNA, partial cds Length = 720 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 168 cggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtccag 227 |||||| || ||| |||| ||||||||||| || |||||||||||| || ||||| | Sbjct: 119 cggcgacggacgcttcacgatgcgcaagacagccggcaagcccaagacggtctcgtccgg 178 Query: 228 cagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccccc 287 |||||||||||||||| |||| || || |||||||||||| ||||||| || | || Sbjct: 179 cagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtgaggcacc 238 Query: 288 gagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 239 atcatacctcaccggtgagttccccggcgactacggctgggacaccg 285
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 99.6 bits (50), Expect = 6e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 ||||||||||| |||||||| | || || ||||||||||||||||| ||||| |||| Sbjct: 154 tccagcagcccatggtacggagctgatcgtgtgctctacctcggcccactctctcgcgag 213 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacac 332 ||||| |||||||||||||| || |||||||| |||||||| |||||||| Sbjct: 214 cccccaagctacctcaccggtgatttccccggtgactacgggtgggacac 263
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 99.6 bits (50), Expect = 6e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgaccccc 286 ||||||| |||||||| | ||||| ||||||||||||||||| |||||||| || || | Sbjct: 149 gcagcccatggtacggtgctgaccgtgtgctctacctcggcccactctccggtgagcctc 208 Query: 287 cgagctacctcaccggcgagttccccggcgactacggctgggacac 332 |||||||||| ||||| |||||||| |||||||| || |||||||| Sbjct: 209 cgagctacctgaccggtgagttccctggcgactatgggtgggacac 254
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgaccccc 286 ||||||| |||||||| |||||||||| ||||| |||||| |||||||||| | | Sbjct: 534 gcagcccctggtacgggcccgaccgcgtcaagtacctaggcccgttctccggcgaggcgc 593 Query: 287 cgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 || |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 594 cgtcctacctgaccggcgagttcgccggcgactacggctgggacaccg 641
>ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.3 mRNA, complete cds Length = 3299 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 3065 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 3006 Query: 332 ccg 334 ||| Sbjct: 3005 ccg 3003
>ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.2 mRNA, complete cds Length = 3338 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 3104 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 3045 Query: 332 ccg 334 ||| Sbjct: 3044 ccg 3042
>ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll binding AT2G34420 (LHB1B2) transcript variant AT2G34420.1 mRNA, complete cds Length = 1354 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 293 Query: 332 ccg 334 ||| Sbjct: 294 ccg 296
>ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) transcript variant AT2G34420.2 mRNA, complete cds Length = 1312 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 293 Query: 332 ccg 334 ||| Sbjct: 294 ccg 296
>gb|AY142513.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 829 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 332 ccg 334 ||| Sbjct: 239 ccg 241
>gb|AY045806.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 1015 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 293 Query: 332 ccg 334 ||| Sbjct: 294 ccg 296
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 93822 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 93763 Query: 332 ccg 334 ||| Sbjct: 93762 ccg 93760 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 95486 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 95545 Query: 332 c 332 | Sbjct: 95546 c 95546
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 80380 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 80439 Query: 332 ccg 334 ||| Sbjct: 80440 ccg 80442 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 78716 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 78657 Query: 332 c 332 | Sbjct: 78656 c 78656
>gb|AY081587.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 883 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 332 ccg 334 ||| Sbjct: 239 ccg 241
>gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 332 ccg 334 ||| Sbjct: 239 ccg 241
>gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 332 ccg 334 ||| Sbjct: 239 ccg 241
>gb|AY065125.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420; T31E10.24) mRNA, complete cds Length = 969 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccg 334 ||| Sbjct: 290 ccg 292
>gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccg 334 ||| Sbjct: 290 ccg 292
>gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccg 334 ||| Sbjct: 290 ccg 292
>gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 1024 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccg 334 ||| Sbjct: 290 ccg 292
>gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 995 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccg 334 ||| Sbjct: 290 ccg 292
>gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccg 334 ||| Sbjct: 290 ccg 292
>emb|BX814757.1|CNS0AEAM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 409 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 239 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 180 Query: 332 ccg 334 ||| Sbjct: 179 ccg 177
>emb|BX821952.1|CNS0AABH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 949 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 209 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 268 Query: 332 ccg 334 ||| Sbjct: 269 ccg 271
>emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 959 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 221 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 280 Query: 332 ccg 334 ||| Sbjct: 281 ccg 283
>emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 903 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 211 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 270 Query: 332 ccg 334 ||| Sbjct: 271 ccg 273
>emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 214 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 273 Query: 332 ccg 334 ||| Sbjct: 274 ccg 276
>emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 911 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 214 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 273 Query: 332 ccg 334 ||| Sbjct: 274 ccg 276
>emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 705 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 646 Query: 332 ccg 334 ||| Sbjct: 645 ccg 643
>emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II chlorophyll a/b binding protein Length = 1405 Score = 85.7 bits (43), Expect = 8e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 479 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 538 Query: 332 ccg 334 ||| Sbjct: 539 ccg 541
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 83.8 bits (42), Expect = 3e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 221 cgtccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcg 280 ||||| ||||||||||||||||| |||| || || |||||||||||| ||||||| | Sbjct: 7 cgtccggcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtg 66 Query: 281 accccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 | | || ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 67 aggcaccatcatacctcaccggtgagttccccggcgactacggctgggacaccg 120
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 183 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccg 240
>emb|AJ000765.1|CRAJ765 Chlamydomonas reinhardtii mRNA for calreticulin Length = 2336 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 239 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccg 182
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 181 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccg 238
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 167 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccg 224
>gb|DQ355993.1| Brassica napus chlorophyll a/b binding protein (LHB1B2) mRNA, partial cds Length = 226 Score = 81.8 bits (41), Expect = 1e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 274 tccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacacc 333 ||||| || |||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 1 tccggagagcccccgagctacctcaccggagagttccccggagactacggatgggacacc 60 Query: 334 g 334 | Sbjct: 61 g 61
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 79.8 bits (40), Expect = 5e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 259 tacctcggcccgctctccggcgaccccccgagctacctcaccggcgagttccccggcgac 318 ||||||||||| |||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 80 tacctcggccccttctccggcgaggccccctcatacctcaccggcgagttcgccggcgac 139 Query: 319 tacggctgggacaccg 334 |||||||||||||||| Sbjct: 140 tacggctgggacaccg 155
>gb|AY389573.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 (LHCP) mRNA, partial cds Length = 712 Score = 77.8 bits (39), Expect = 2e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 163 tacctcaccggtgagttccccggcgactacggctgggacaccg 205
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 75.8 bits (38), Expect = 8e-11 Identities = 92/110 (83%) Strand = Plus / Plus Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 ||||||||||||||||||||| | |||||||| ||| | || || ||||||| || Sbjct: 25 tccagcagcccgtggtacggccctgaccgcgttaagtacttggggccattctccggtgag 84 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacac 332 ||||||||||| | ||||| ||||||||||| ||||||||||||||||| Sbjct: 85 tccccgagctacttgaccggtgagttccccggtgactacggctgggacac 134
>gb|DQ226787.1| Boechera divaricarpa isolate SLW-B-B06 mRNA sequence Length = 827 Score = 73.8 bits (37), Expect = 3e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| || |||||||||||||| || ||||||||||| |||||||| ||||||| Sbjct: 13 tctccggcgagccaccgagctacctcacaggagagttccccggagactacggatgggaca 72 Query: 332 c 332 | Sbjct: 73 c 73
>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein (CipLhcb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 975 Score = 73.8 bits (37), Expect = 3e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||| ||||||||||||||||||||| || |||||||| ||||||| Sbjct: 234 tctccggcgagcccccgtcctacctcaccggcgagttcccaggtgactacggttgggaca 293 Query: 332 c 332 | Sbjct: 294 c 294
>dbj|AU066540.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl+paraquat inducible, partial cds, clone:M26 Length = 476 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 253 tacctgaccggcgagttccccggcgactacggctgggacac 293
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 189 ctacctgaccggcgagttccccggtgactacggctgggacaccg 232
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| || |||||||||||||||||||||||||||||||||| Sbjct: 177 ctacctgactggcgagttccccggcgactacggctgggacaccg 220
>gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds Length = 2095 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 1146 ctacctcactggcgagttccccggtgactacggctgggacaccg 1189
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| || |||||||||||||||||||||||||||||||||| Sbjct: 193 ctacctgactggcgagttccccggcgactacggctgggacaccg 236
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| || |||||||||||||||||||||||||||||||||| Sbjct: 223 ctacctgactggcgagttccccggcgactacggctgggacaccg 266
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| || |||||||||||||||||||||||||||||||||| Sbjct: 641 ctacctgactggcgagttccccggcgactacggctgggacaccg 684
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| || |||||||||||||||||||||||||||||||||| Sbjct: 851 ctacctgactggcgagttccccggcgactacggctgggacaccg 894
>gb|DQ226825.1| Boechera divaricarpa isolate SLW-B-H09 mRNA sequence Length = 775 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| || ||||||||||| ||||| ||||||||||| ||||| || ||||||| Sbjct: 13 tctccggcgagccaccgagctaccttaccggagagttccccggtgactatggatgggaca 72 Query: 332 ccg 334 ||| Sbjct: 73 ccg 75
>gb|AY288914.1| Brassica oleracea chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1042 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| || ||||||||||| ||||| |||||||||| |||||||| ||||||| Sbjct: 257 tctccggcgagccaccgagctaccttaccggacagttccccggagactacggatgggaca 316 Query: 332 ccg 334 ||| Sbjct: 317 ccg 319
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 69.9 bits (35), Expect = 5e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 205 tacctgactggcgagttccccggcgactacggctgggacaccg 247
>gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 980 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || ||||| ||||||||||| || ||||||||||| |||||||| ||||||| Sbjct: 224 tctccggagagcccccaagctacctcacaggagagttccccggtgactacggatgggaca 283 Query: 332 ccg 334 ||| Sbjct: 284 ccg 286
>emb|X63197.1|HVLHBC H.vulgare lhbC mRNA for type III LHCII CAB precursor protein Length = 928 Score = 69.9 bits (35), Expect = 5e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 300 cggcgagttccccggcgactacggctgggacaccg 334 ||||||||||||||||||||||||||||||||||| Sbjct: 243 cggcgagttccccggcgactacggctgggacaccg 277
>gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1) gene, complete cds Length = 2290 Score = 69.9 bits (35), Expect = 5e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 980 tacctgactggcgagttccccggcgactacggctgggacaccg 1022
>gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m9 (Lhcbm9) mRNA, complete cds Length = 1221 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacac 332 |||||| || |||||||||||||||||||||||||||||||| Sbjct: 196 ctacctgactggcgagttccccggcgactacggctgggacac 237
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacac 332 |||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 203 ctacctgaccggcgagttccccggtgactacggctgggacac 244
>gb|AF104630.1|AF104630 Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb2) mRNA, complete cds Length = 1200 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacac 332 |||||| || |||||||||||||||||||||||||||||||| Sbjct: 201 ctacctgactggcgagttccccggcgactacggctgggacac 242
>ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding AT1G29930 (CAB1) mRNA, complete cds Length = 1044 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 313
>ref|NM_102731.2| Arabidopsis thaliana CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3); chlorophyll binding AT1G29910 (CAB3) mRNA, complete cds Length = 1020 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 252 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 300
>gb|BT015572.1| Arabidopsis thaliana At1g29910 mRNA sequence Length = 762 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 157 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 205
>gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At1g29930) mRNA, complete cds Length = 835 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 199 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 247
>gb|AY050935.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At1g29930) mRNA, complete cds Length = 1014 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 313
>gb|AY114594.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910) mRNA, complete cds Length = 870 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 199 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 247
>gb|AY065165.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910; F1N18.5) mRNA, complete cds Length = 1019 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 252 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 300
>gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1019 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 313
>gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1045 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 313
>gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 999 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 313
>emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 234 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 282
>emb|BX817619.1|CNS0AAVV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 249 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 297
>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence, complete sequence Length = 82053 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 145 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 193
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 21937 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 21985 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 16716 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 16668
>emb|X03909.1|ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophyll a/b binding protein Length = 1109 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 416 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 464
>emb|X03908.1|ATLHCP2 A.thaliana gene (LHCP AB 180) for chlorophyll a/b binding protein Length = 1060 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 405 ccgagctaccttaccggagagttccccggagactacggatgggacaccg 453
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||| ||||| |||||| |||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 426 tctctggcgagcccccgtcctacctaaccggtgagttcccaggcgactacggctgggaca 485 Query: 332 c 332 | Sbjct: 486 c 486
>gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 977 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||| ||||| |||||| ||||||||| ||||||||||| || |||||||||||||||| Sbjct: 207 tctctggcgagcccccgtcctacctcactggcgagttcccaggtgactacggctgggaca 266 Query: 332 c 332 | Sbjct: 267 c 267
>ref|XM_483142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 350 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 401 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 398 ccggtgagttccccggctactacggctg 425
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggac 330 |||||| || |||||||||||||||||||||||||||||| Sbjct: 246 ctacctgactggcgagttccccggcgactacggctgggac 285
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 24462467 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 24462518 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 24462515 ccggtgagttccccggctactacggctg 24462542
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 37953 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37906 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 37909 ccggtgagttccccggctactacggctg 37882
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 78183 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 78234 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 78231 ccggtgagttccccggctactacggctg 78258
>ref|NM_190738.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccg 277 ||||||||||||| |||||||||| |||||||| |||||||||||| Sbjct: 483 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccg 529
>emb|X16436.1|SACAB Mustard cab gene for chlorophyll a/b-binding protein Length = 2774 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| ||||| |||||||| || || ||||||||||| ||||| || ||||||| Sbjct: 1757 tctccggcgagcccccaagctaccttactggagagttccccggagactatggatgggaca 1816 Query: 332 ccg 334 ||| Sbjct: 1817 ccg 1819
>emb|BX841915.1|CNS09Y31 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 907 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 677 ccgagctaccttaccggagagttccccggagactacggatgggacac 631
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 232 tacctgaccggcgagttccccggcgactacgggtgggagaccg 274
>emb|X15894.1|SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b-binding polypeptide Length = 2775 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| ||||| |||||||| || || ||||||||||| ||||| || ||||||| Sbjct: 1758 tctccggcgagcccccaagctaccttactggagagttccccggagactatggatgggaca 1817 Query: 332 ccg 334 ||| Sbjct: 1818 ccg 1820
>emb|X69434.1|CSCAB1 C.stellata cab1 mRNA for chlorophyll a/b binding protein Length = 1067 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 300 cggcgagttccccggcgactacggctgggacaccg 334 ||||||||||||||| ||||||||||||||||||| Sbjct: 187 cggcgagttccccggtgactacggctgggacaccg 221
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 202 tacctcactggcgagttccccggtgactacggctgggataccg 244
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 305 agttccccggcgactacggctgggacaccg 334 |||||||||||||||||||||||||||||| Sbjct: 205 agttccccggcgactacggctgggacaccg 234
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacac 332 |||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 378 ctacctgaccggcgagttccccggagactacgggtgggacac 419
>gb|AF133340.1|AF133340 Phalaenopsis sp. 'KCbutterfly' putative chlorophyll a/b-binding protein mRNA, complete cds Length = 1118 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacac 332 ||||||||| |||||||||||||| || |||||||||||||| Sbjct: 290 ctacctcactggcgagttccccggtgattacggctgggacac 331 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 169 ggcgagggccgcatcaccatgc 190 |||||||||||||||||||||| Sbjct: 144 ggcgagggccgcatcaccatgc 165
>ref|NM_128995.2| Arabidopsis thaliana LHB1B1; chlorophyll binding AT2G34430 (LHB1B1) mRNA, complete cds Length = 1008 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 c 332 | Sbjct: 304 c 304
>gb|AF339687.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 851 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 182 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 241 Query: 332 c 332 | Sbjct: 242 c 242
>gb|AF326864.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 1019 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 c 332 | Sbjct: 304 c 304
>gb|AY120776.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 1003 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 c 332 | Sbjct: 304 c 304
>gb|AF324693.2|AF324693 Arabidopsis thaliana At2g34430 (At2g34430/T31E10.23) mRNA, complete cds Length = 1009 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 c 332 | Sbjct: 304 c 304
>gb|AY198376.1| Citrus limon chlorophyll a/b-binding protein precursor, gene, partial cds; nuclear gene for chloroplast product Length = 647 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||| ||||| ||||| |||||| | ||||| |||||||| ||||||||||| ||||||| Sbjct: 179 tctctggcgagcccccaagctacttgaccggtgagttccctggcgactacggttgggaca 238 Query: 332 c 332 | Sbjct: 239 c 239
>gb|AY086307.1| Arabidopsis thaliana clone 23727 mRNA, complete sequence Length = 979 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 c 332 | Sbjct: 304 c 304
>emb|X64459.1|ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II type I chlorophyll a/b binding protein Length = 1301 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 482 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 541 Query: 332 c 332 | Sbjct: 542 c 542
>gb|BT002103.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 853 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 182 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 241 Query: 332 c 332 | Sbjct: 242 c 242
>gb|AF165529.1|AF165529 Rumex palustris chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 986 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacac 332 ||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 253 tacctgaccggagagttccccggcgactacggatgggacac 293
>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007, complete sequence Length = 92741 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || |||||| |||| | ||||| ||||||||||| |||||||||||||||| Sbjct: 66175 tctccggtgagcccccgtcctacttgaccggtgagttccccggtgactacggctgggaca 66116 Query: 332 c 332 | Sbjct: 66115 c 66115
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacac 332 ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 938 tacctgacgggcgagttccccggcgactacgggtgggacac 978
>gb|M23531.1|DUNCBP D.salina major chlorophyll binding protein mRNA, complete cds Length = 1240 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccg 334 ||||||||||||||||| |||||||||||||| |||| Sbjct: 399 accggcgagttccccggtgactacggctgggataccg 435
>dbj|AU066541.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl+paraquat inducible, partial cds, clone:M27 Length = 687 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| || |||||||||||||||||||| Sbjct: 173 tacctgaccggcgagtttccgggcgactacggctgggacac 213
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 56.0 bits (28), Expect = 7e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 62463 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 62510 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 62507 ccggtgagttccccggctactacggctg 62534
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 56.0 bits (28), Expect = 7e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| ||| | ||||||||||||||||||||||||| Sbjct: 4429 ctacctgaccggtgagctgcccggcgactacggctgggacaccg 4472 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacac 332 |||||| ||||| ||| | ||||||||||||||||||||||| Sbjct: 986 ctacctgaccggtgagctgcccggcgactacggctgggacac 1027 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 310 cccggcgactacggctgggacaccg 334 ||||||||||||||||||||||||| Sbjct: 5744 cccggcgactacggctgggacaccg 5768
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 7e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 17802509 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 17802556 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gctagctagctagcacgcag 81 |||||||||||||||||||| Sbjct: 24615004 gctagctagctagcacgcag 24615023 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 17802553 ccggtgagttccccggctactacggctg 17802580
>gb|AF247178.1|AF247178 Picea glauca needle chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1096 Score = 56.0 bits (28), Expect = 7e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 295 ctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| || |||||||||||||| |||||||||| Sbjct: 282 ctcaccggcgaatttcccggcgactacgggtgggacaccg 321
>emb|X61608.1|BNLHCB3A B.napus gene for LHCII Type III chlorophyll a/b-binding protein, partial Length = 2036 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| ||||| ||||||||||| || |||||||||| Sbjct: 1568 tacctcaccggagagtttcccggcgactatggttgggacaccg 1610
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccgg 314 ||||| |||||||||||||| || |||||||||||||| Sbjct: 490 ggcgagcccccgagctacctgactggcgagttccccgg 527
>gb|M23532.1|PCPCBP P.patens major chlorophyll binding protein gene, complete cds Length = 2544 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccg 334 ||||||||| ||||||||||||| |||||||||| Sbjct: 1856 ggcgagttcgccggcgactacggatgggacaccg 1889
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccgg 314 ||||| |||||||||||||| || |||||||||||||| Sbjct: 403 ggcgagcccccgagctacctgactggcgagttccccgg 440
>gb|AF220527.1|AF220527 Euphorbia esula chlorophyll a/b binding protein precursor, mRNA, complete cds Length = 927 Score = 50.1 bits (25), Expect = 0.005 Identities = 52/61 (85%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || ||||| |||||| | ||||| || |||||||| ||||| |||||||||| Sbjct: 191 tctccggtgagcccccaagctacttgaccggtgaattccccggtgactatggctgggaca 250 Query: 332 c 332 | Sbjct: 251 c 251
>emb|X14341.1|SOCABP S.oleracea chloroplast mRNA for chlorophyll a/b binding protein Length = 980 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacac 332 ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 257 tacctcaccggtgagttccctggtgactacggttgggacac 297
>ref|NM_126540.2| Arabidopsis thaliana LHCB2.1; chlorophyll binding AT2G05100 (LHCB2.1) mRNA, complete cds Length = 1068 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 262 ctacctaaccggagaataccccggagactacggctgggacaccg 305
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 242 ggcgagttcccgggcgactacgggtgggacac 273
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 266 ggcgagttcccgggcgactacgggtgggacac 297
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 266 ggcgagttcccgggcgactacgggtgggacac 297
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 268 ggcgagttcccgggcgactacgggtgggacac 299
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacac 302
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacac 302
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 273 ggcgagttcccgggcgactacgggtgggacac 304
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 306 ggcgagttcccgggcgactacgggtgggacac 337
>gb|AY045787.1| Arabidopsis thaliana At2g05100 mRNA sequence Length = 1047 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 347 ctacctaaccggagaataccccggagactacggctgggacaccg 390
>gb|AC007443.5| Arabidopsis thaliana chromosome 2 clone F15L11 map ve013, complete sequence Length = 13145 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Minus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 5600 ctacctaaccggagaataccccggagactacggctgggacaccg 5557
>gb|AY052348.1| Arabidopsis thaliana At2g05100/F15L11.2 mRNA, complete cds Length = 1001 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 260 ctacctaaccggagaataccccggagactacggctgggacaccg 303
>gb|AY052275.1| Arabidopsis thaliana At2g05100/F15L11.2 mRNA, complete cds Length = 943 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 255 ctacctaaccggagaataccccggagactacggctgggacaccg 298
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 22434279 ggcgagttcccgggcgactacgggtgggacac 22434310 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 agcgagcgatggcggccgcggcg 102 ||||||||||||||||||||||| Sbjct: 25864797 agcgagcgatggcggccgcggcg 25864819
>emb|BX819843.1|CNS0A9GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS37ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 980 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 240 ctacctaaccggagaataccccggagactacggctgggacaccg 283
>emb|BX819702.1|CNS0A9H1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZH11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 912 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 223 ctacctaaccggagaataccccggagactacggctgggacaccg 266
>emb|BX821844.1|CNS0A936 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 859 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 238 ctacctaaccggagaataccccggagactacggctgggacaccg 281
>emb|BX821132.1|CNS0A9BI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 941 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 238 ctacctaaccggagaataccccggagactacggctgggacaccg 281
>emb|BX819861.1|CNS0A9DS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZD09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 964 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 252 ctacctaaccggagaataccccggagactacggctgggacaccg 295
>emb|BX819688.1|CNS0A9G4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 914 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 221 ctacctaaccggagaataccccggagactacggctgggacaccg 264
>emb|BX819687.1|CNS0A9G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 917 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 223 ctacctaaccggagaataccccggagactacggctgggacaccg 266
>emb|BX819683.1|CNS0A80L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 223 ctacctaaccggagaataccccggagactacggctgggacaccg 266
>emb|BX842010.1|CNS09YA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 934 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 243 ctacctaaccggagaataccccggagactacggctgggacaccg 286
>gb|AF134124.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.3) mRNA, complete cds Length = 967 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 250 ctacctaaccggagaataccccggagactacggctgggacaccg 293
>gb|AF134122.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.1) mRNA, complete cds Length = 974 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 259 ctacctaaccggagaataccccggagactacggctgggacaccg 302
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 95346 ggcgagttcccgggcgactacgggtgggacac 95377
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacac 302
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacac 302
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacac 302
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 242 ggcgagttcccgggcgactacgggtgggacac 273
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacac 302
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 266 ggcgagttcccgggcgactacgggtgggacac 297
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 266 ggcgagttcccgggcgactacgggtgggacac 297
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacac 302
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 267 ggcgagttcccgggcgactacgggtgggacac 298
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 273 ggcgagttcccgggcgactacgggtgggacac 304
>gb|BT001933.1| Arabidopsis thaliana clone C105385 putative chlorophyll a/b binding protein (At2g05100) mRNA, complete cds Length = 829 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccg 334 |||||| ||||| || | |||||| ||||||||||||||||||| Sbjct: 201 ctacctaaccggagaataccccggagactacggctgggacaccg 244
>gb|AF022738.1|AF022738 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1105 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||||||||| |||||||| Sbjct: 247 ggcgagttcccgggcgactacgggtgggacac 278
>ref|NM_197383.1| Oryza sativa (japonica cultivar-group) putaive mitochondrial inner membrane protein (OSJNBb0018B10.5), mRNA Length = 588 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Minus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 414 cgcggcgaccatggcgctctccatcccggcg 384
>gb|DQ226734.1| Boechera divaricarpa isolate SLW-A-E08 mRNA sequence Length = 399 Score = 46.1 bits (23), Expect = 0.072 Identities = 38/43 (88%) Strand = Plus / Minus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||||||||| || || ||||||||||| || |||||||||| Sbjct: 367 tacctcaccggagaatttcccggcgactatggttgggacaccg 325
>emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein Length = 1197 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 298 accggtgagttccccggtgactacgggtgggacac 332
>gb|AY617086.1| Pinus roxburghii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacac 262
>gb|AY617085.1| Pinus merkusii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacac 262
>gb|AY617084.1| Pinus contorta chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacac 262
>gb|AY617083.1| Pinus radiata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacac 262
>gb|AY617082.1| Pinus ponderosa chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacac 262
>gb|AY617081.1| Pinus echinata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 762 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacac 262
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Plus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 34037 cgcggcgaccatggcgctctccatcccggcg 34067
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 274 accggtgagttccccggtgactacgggtgggacac 308
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Plus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 19576846 cgcggcgaccatggcgctctccatcccggcg 19576876 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgt 254 |||||||||||||||| |||||||||| Sbjct: 18136656 gcagcccgtggtacggacccgaccgcgt 18136683
>emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b binding protein Length = 2574 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 1376 accggtgagttccccggtgactacgggtgggacac 1410
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||| |||||||| |||||||| Sbjct: 283 accggtgagttccccggtgactacgggtgggacac 317
>dbj|AK107812.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-F03, full insert sequence Length = 944 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Minus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 519 cgcggcgaccatggcgctctccatcccggcg 489
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 agcgagcgatggcggccgcggcg 102 ||||||||||||||||||||||| Sbjct: 35245 agcgagcgatggcggccgcggcg 35267
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Plus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 19588122 cgcggcgaccatggcgctctccatcccggcg 19588152 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgt 254 |||||||||||||||| |||||||||| Sbjct: 18145909 gcagcccgtggtacggacccgaccgcgt 18145936
>dbj|D14002.1|LAUCAB Lettuce mRNA for light-harvesting chlorophyll a/b-binding protein (LHCP), complete cds Length = 905 Score = 46.1 bits (23), Expect = 0.072 Identities = 38/43 (88%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccg 334 ||||| ||||| || ||||| || ||||||||||||||||||| Sbjct: 249 tacctgaccggtgaattcccaggtgactacggctgggacaccg 291
>ref|NM_126537.2| Arabidopsis thaliana LHCB2.2; chlorophyll binding AT2G05070 (LHCB2.2) mRNA, complete cds Length = 1060 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 279 ccccggagactacggctgggacaccg 304
>ref|NM_001036246.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G05060 transcript variant AT2G05060.2 mRNA, complete cds Length = 2130 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 1861 ccccggagactacggctgggacaccg 1836
>ref|XM_609577.2| PREDICTED: Bos taurus similar to matrix metalloproteinase 25 preproprotein (LOC531092), mRNA Length = 2217 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 catggcgctctcctccccggcg 126 |||||||||||||||||||||| Sbjct: 504 catggcgctctcctccccggcg 483
>emb|X61915.1|PTCABP P.thunbergii cab gene Length = 5419 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Plus Query: 295 ctcaccggcgagttccccggcgactacggctgggacac 332 |||||||| || || |||||||||||||| |||||||| Sbjct: 2476 ctcaccggagaatttcccggcgactacgggtgggacac 2513
>gb|BC029947.1| Homo sapiens, clone IMAGE:5196281, mRNA Length = 114 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 103 accatggcgctctcctccccggcgat 128 |||||||||||||||||||| ||||| Sbjct: 46 accatggcgctctcctcccccgcgat 71
>gb|AY093372.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070) mRNA, complete cds Length = 881 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 219 ccccggagactacggctgggacaccg 244
>gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genomic sequence, complete sequence Length = 103889 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 81584 ccccggagactacggctgggacaccg 81559
>gb|AY066036.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 798 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 219 ccccggagactacggctgggacaccg 244
>gb|AY062563.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070; F1O13.20) mRNA, complete cds Length = 958 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 279 ccccggagactacggctgggacaccg 304
>gb|AY054218.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 929 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 277 ccccggagactacggctgggacaccg 302
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 293 acctcaccggcgagttccccggcgac 318 |||||||||||||| ||||||||||| Sbjct: 28517440 acctcaccggcgagctccccggcgac 28517415 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 293 acctcaccggcgagttccccggcgac 318 |||||||||||||| ||||||||||| Sbjct: 28493709 acctcaccggcgagctccccggcgac 28493684 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 cttcggcgagggccgcatcaccat 188 ||||||||||| |||||||||||| Sbjct: 16289674 cttcggcgaggcccgcatcaccat 16289651
>emb|BX819347.1|CNS0A9RX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 260 ccccggagactacggctgggacaccg 285
>emb|BX819270.1|CNS0A9RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 937 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 250 ccccggagactacggctgggacaccg 275
>emb|BX820206.1|CNS0A9D7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 906 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 268 ccccggagactacggctgggacaccg 293
>emb|BX820202.1|CNS0A9FS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 873 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 262 ccccggagactacggctgggacaccg 287
>emb|BX819668.1|CNS0A9CZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 267 ccccggagactacggctgggacaccg 292
>emb|BX819509.1|CNS0A82Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 926 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 255 ccccggagactacggctgggacaccg 280
>gb|AF134123.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.2) mRNA, complete cds Length = 943 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccg 334 |||||| ||||||||||||||||||| Sbjct: 269 ccccggagactacggctgggacaccg 294
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 106 atggcgctctcctccccggcgatggc 131 ||||||||||| |||||||||||||| Sbjct: 1774135 atggcgctctcgtccccggcgatggc 1774110
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 293 acctcaccggcgagttccccggcgac 318 |||||||||||||| ||||||||||| Sbjct: 124473 acctcaccggcgagctccccggcgac 124448 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 293 acctcaccggcgagttccccggcgac 318 |||||||||||||| ||||||||||| Sbjct: 100742 acctcaccggcgagctccccggcgac 100717
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 293 acctcaccggcgagttccccggcgac 318 |||||||||||||| ||||||||||| Sbjct: 8918 acctcaccggcgagctccccggcgac 8893
>emb|X13407.1|PTCAB Pinus thunbergii cab mRNA for light-harvesting chlorophyll a/b binding protein Length = 978 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Plus Query: 295 ctcaccggcgagttccccggcgactacggctgggacac 332 |||||||| || || |||||||||||||| |||||||| Sbjct: 257 ctcaccggagaatttcccggcgactacgggtgggacac 294
>dbj|AK110462.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F12, full insert sequence Length = 3503 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 293 acctcaccggcgagttccccggcgac 318 |||||||||||||| ||||||||||| Sbjct: 851 acctcaccggcgagctccccggcgac 876
>gb|AF003128.1|AF003128 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 44.1 bits (22), Expect = 0.28 Identities = 37/42 (88%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacac 332 |||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 219 ctaccttaccggtgaatttcccggtgactacggctgggacac 260
>gb|AY845253.1| Pisum sativum light-harvesting chlorophyll-a/b binding protein Lhcb1 mRNA, complete cds Length = 801 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 304 gagttccccggcgactacggctgggacac 332 ||||||||||| |||||||| |||||||| Sbjct: 217 gagttccccggtgactacggttgggacac 245
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 tctcctccccggcgatggccggcac 137 ||||||||| ||||||||||||||| Sbjct: 3767946 tctcctcccgggcgatggccggcac 3767970
>gb|AY219853.1| Nicotiana tabacum chlorophyll a/b binding protein mRNA, complete cds Length = 946 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacac 332 ||||||||||| |||||||| || ||||| || |||||||| Sbjct: 261 tacctcaccggtgagttcccaggtgactatggttgggacac 301
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 caaggtggcggcgtccagcag 230 ||||||||||||||||||||| Sbjct: 2651046 caaggtggcggcgtccagcag 2651026
>emb|X56538.1|PSCABIIC P.sativum Cab-8 gene for photosystemm II chlorophyll a/b binding protein Length = 2236 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 304 gagttccccggcgactacggctgggacac 332 ||||||||||| |||||||| |||||||| Sbjct: 1533 gagttccccggtgactacggttgggacac 1561
>gb|AY105774.1| Zea mays PCO068188 mRNA sequence Length = 708 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 gagcgatggcggccgcggcga 103 ||||||||||||||||||||| Sbjct: 183 gagcgatggcggccgcggcga 203
>gb|M64619.1|PEACAB66 Pea cab gene, complete cds Length = 1666 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 304 gagttccccggcgactacggctgggacac 332 ||||||||||| |||||||| |||||||| Sbjct: 935 gagttccccggtgactacggttgggacac 963
>gb|K02067.1|PEACAB80 Pea (P.sativum) gene AB80 encoding major light-harvesting chlorophyll a/b-binding protein (polypeptide 15) complex precursor, complete coding sequence Length = 1993 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 304 gagttccccggcgactacggctgggacac 332 ||||||||||| |||||||| |||||||| Sbjct: 1236 gagttccccggtgactacggttgggacac 1264
>gb|AC154521.2| Mus musculus BAC clone RP23-473O6 from chromosome 13, complete sequence Length = 211603 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 gcctcctactgtcactgccagcct 43 |||||||| ||||||||||||||| Sbjct: 57457 gcctcctagtgtcactgccagcct 57480
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gccggcaccccggtgaaggc 149 |||||||||||||||||||| Sbjct: 659551 gccggcaccccggtgaaggc 659570
>ref|NM_187740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2655 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 cttcggcgagggccgcatcaccat 188 ||||||||||| |||||||||||| Sbjct: 481 cttcggcgaggcccgcatcaccat 458
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gctagctagctagcacgcag 81 |||||||||||||||||||| Sbjct: 129180 gctagctagctagcacgcag 129199
>gb|AC135917.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048K05, complete sequence Length = 104254 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gctagctagctagcacgcag 81 |||||||||||||||||||| Sbjct: 1341 gctagctagctagcacgcag 1360
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gcgcaagacggcgggcaagc 208 |||||||||||||||||||| Sbjct: 1116027 gcgcaagacggcgggcaagc 1116008
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 gagcgatggcggccgcggcg 102 |||||||||||||||||||| Sbjct: 976457 gagcgatggcggccgcggcg 976438
>ref|XM_426224.1| PREDICTED: Gallus gallus similar to transcription factor AP-2 beta-like 1; AP-2 like; activating enhancer binding protein 2 beta-like 1; transcription factor AP-2 beta (activating enhancer-binding protein 2 beta)-like 1 (LOC428666), mRNA Length = 1341 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctcc 246 |||||||||||||||||||| Sbjct: 328 gcagcccgtggtacggctcc 347
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gcgcaagacggcgggcaagc 208 |||||||||||||||||||| Sbjct: 2082835 gcgcaagacggcgggcaagc 2082854
>gb|DQ249342.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 unknown polyketide biosynthetic gene cluster, partial sequence; and AHBA biosynthesis gene cluster, complete sequence Length = 55488 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cggcgagttccccggcgactacggctgggaca 331 |||||||||||||| |||| ||||||||||| Sbjct: 13179 cggcgagttccccgacgaccgcggctgggaca 13210
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccat 188 ||||||||||| |||||||||||| Sbjct: 3503743 cttcggcgaggcccgcatcaccat 3503766
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 303 cgagttccccggcgactacggctgggacaccg 334 ||||||||||| |||| |||||||||||||| Sbjct: 24424 cgagttccccgccgaccgcggctgggacaccg 24455
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 227 gcagcccgtggtacggctccgaccgcgt 254 |||||||||||||||| |||||||||| Sbjct: 76472 gcagcccgtggtacggacccgaccgcgt 76445 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,008,848 Number of Sequences: 3902068 Number of extensions: 2008848 Number of successful extensions: 47914 Number of sequences better than 10.0: 283 Number of HSP's better than 10.0 without gapping: 288 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45479 Number of HSP's gapped (non-prelim): 2415 length of query: 335 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 313 effective length of database: 17,147,199,772 effective search space: 5367073528636 effective search space used: 5367073528636 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
