ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet52d04 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 217 bits (552), Expect = 6e-57 Identities = 111/116 (95%), Positives = 113/116 (97%) Frame = +3 Query: 54 MAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAA 233 MAAS QAAAT+MPAKIGGRASS RPSSHVARAFGVDA ARITCSLQSDIREVASKCADAA Sbjct: 1 MAASLQAAATVMPAKIGGRASSARPSSHVARAFGVDAGARITCSLQSDIREVASKCADAA 60 Query: 234 KMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVD 401 KMAGFALATSALLVSGA+AEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVD Sbjct: 61 KMAGFALATSALLVSGATAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVD 116
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 168 bits (426), Expect = 2e-42 Identities = 83/119 (69%), Positives = 103/119 (86%), Gaps = 3/119 (2%) Frame = +3 Query: 54 MAASFQAAATLMPAKIGGRASS-VRPSSHVARAFGVD--AAARITCSLQSDIREVASKCA 224 MA+S QAAATL+PAK+G A + +R +SH+++AFG D A R+TCS+ SD+R++A KC Sbjct: 1 MASSLQAAATLIPAKVGAPARTHLRSNSHLSKAFGFDNSTAGRLTCSINSDLRDIAQKCT 60 Query: 225 DAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVD 401 DAAK+AGFALATSAL++SGASAEG PKRLTFDEIQSKTYMEVKG+GTANQCPTI+GG + Sbjct: 61 DAAKLAGFALATSALVISGASAEGVPKRLTFDEIQSKTYMEVKGSGTANQCPTIEGGTE 119
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 165 bits (417), Expect = 3e-41 Identities = 86/122 (70%), Positives = 105/122 (86%), Gaps = 6/122 (4%) Frame = +3 Query: 54 MAASFQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 215 MAAS QAAATLM P K+GG ++ +R S V++AFG++ +A+R++CSLQ+D+++ A Sbjct: 1 MAASLQAAATLMQPTKVGGVSARNNLQLRSSQSVSKAFGLEPSASRLSCSLQTDLKDFAQ 60 Query: 216 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 395 KC DAAK+AGFALATSAL+VSGA+AEG PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG Sbjct: 61 KCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 120 Query: 396 VD 401 VD Sbjct: 121 VD 122
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 162 bits (410), Expect = 2e-40 Identities = 83/118 (70%), Positives = 100/118 (84%), Gaps = 2/118 (1%) Frame = +3 Query: 54 MAASFQAAATLM-PAKIGGRASSVRPSSHVARAFGVDA-AARITCSLQSDIREVASKCAD 227 MAAS QAAATLM P K+ ++ + V++AFG++ A++TCSLQSD +E+A KC + Sbjct: 1 MAASLQAAATLMQPTKLRSNTLQLKSNQSVSKAFGLEHYGAKVTCSLQSDFKELAHKCVE 60 Query: 228 AAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVD 401 A+K+AGFALATSAL+VSGASAEGAPKRLTFDEIQSKTY+EVKGTGTANQCPTIDGGVD Sbjct: 61 ASKIAGFALATSALVVSGASAEGAPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGVD 118
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 160 bits (405), Expect = 7e-40 Identities = 84/118 (71%), Positives = 102/118 (86%), Gaps = 3/118 (2%) Frame = +3 Query: 54 MAASFQAAATLM-PAKIGGRAS-SVRPSSHVARAFGVD-AAARITCSLQSDIREVASKCA 224 MAAS QAAATLM P K+G R + +R + V++AFGV+ + R+TCSLQ++I+E+A KC Sbjct: 1 MAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCT 60 Query: 225 DAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV 398 DAAK+AGFALATSAL+VSGA+AEG PKRLT+DEIQSKTYMEVKGTGTANQCPTI+GGV Sbjct: 61 DAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGV 118
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 158 bits (399), Expect = 3e-39 Identities = 85/121 (70%), Positives = 102/121 (84%), Gaps = 6/121 (4%) Frame = +3 Query: 54 MAASFQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 215 MAAS QAAATLM P K+G + +R + V++AFGV+ AAAR+TCSLQ++++++A Sbjct: 1 MAASLQAAATLMQPTKVGVAPARNNLQLRSAQSVSKAFGVEPAAARLTCSLQTELKDLAQ 60 Query: 216 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 395 K DAAK+AGFALATSAL+VSGA+AEG PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG Sbjct: 61 KFTDAAKVAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 120 Query: 396 V 398 V Sbjct: 121 V 121
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 155 bits (393), Expect = 2e-38 Identities = 83/119 (69%), Positives = 98/119 (82%), Gaps = 5/119 (4%) Frame = +3 Query: 54 MAASFQAAAT-LMPAKIGGRASS---VRPSSHVARAFGVDAA-ARITCSLQSDIREVASK 218 MA S QAAAT L PAKI S +R + V ++FG+D++ AR+TCSL SD+++ A K Sbjct: 1 MATSLQAAATFLQPAKIAASPSRNVHLRSNQTVGKSFGLDSSQARLTCSLHSDLKDFAGK 60 Query: 219 CADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 395 C+DAAK+AGFALATSAL+VSGA AEGAPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGG Sbjct: 61 CSDAAKIAGFALATSALVVSGAGAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG 119
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 148 bits (373), Expect = 3e-36 Identities = 81/120 (67%), Positives = 97/120 (80%), Gaps = 6/120 (5%) Frame = +3 Query: 54 MAASFQAAAT-LMPAKIG---GRASS-VRPSSHVARAFGVD-AAARITCSLQSDIREVAS 215 MAAS Q+ AT L AKI R SS +R + V ++FG++ ++AR+TCS QSD ++ Sbjct: 1 MAASLQSTATFLQSAKIATAPSRGSSHLRSTQAVGKSFGLETSSARLTCSFQSDFKDFTG 60 Query: 216 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 395 KC+DA K+AGFALATSAL+VSGASAEGAPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGG Sbjct: 61 KCSDAVKIAGFALATSALVVSGASAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG 120
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 142 bits (357), Expect = 2e-34 Identities = 75/121 (61%), Positives = 98/121 (80%), Gaps = 5/121 (4%) Frame = +3 Query: 54 MAASFQAAAT-LMPAKIGGRAS-SVRPSSHVARAFGVDAAA---RITCSLQSDIREVASK 218 MAAS QA+ T L P K+ R + +R + +V +AFGV++A+ R++ SLQSD++E+A+K Sbjct: 1 MAASLQASTTFLQPTKVASRNTLQLRSTQNVCKAFGVESASSGGRLSLSLQSDLKELANK 60 Query: 219 CADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV 398 C DA K+AG ALATSAL+ SGA+AEG KRLT+DEIQSKTY+EVKGTGTANQCPT++GGV Sbjct: 61 CVDATKLAGLALATSALIASGANAEGG-KRLTYDEIQSKTYLEVKGTGTANQCPTVEGGV 119 Query: 399 D 401 D Sbjct: 120 D 120
>PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloroplast (OEE1)| (Fragment) Length = 31 Score = 67.0 bits (162), Expect = 1e-11 Identities = 30/31 (96%), Positives = 31/31 (100%) Frame = +3 Query: 291 EGAPKRLTFDEIQSKTYMEVKGTGTANQCPT 383 EGAPKRLT+DEIQSKTYMEVKGTGTANQCPT Sbjct: 1 EGAPKRLTYDEIQSKTYMEVKGTGTANQCPT 31
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 55.1 bits (131), Expect = 4e-08 Identities = 30/89 (33%), Positives = 46/89 (51%) Frame = +3 Query: 129 SSHVARAFGVDAAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKR 308 ++ +A GV AAR V + A+ F A +A++ + A G+ Sbjct: 3 AAQTVKAAGVSRAAR----------PVRANVVCKAQKVEFGQAAAAVVAASALVAGSANA 52 Query: 309 LTFDEIQSKTYMEVKGTGTANQCPTIDGG 395 LT+DE+Q TY++VKGTG AN CP ++ G Sbjct: 53 LTYDELQGLTYLQVKGTGIANTCPVLEKG 81
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 52.0 bits (123), Expect = 3e-07 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Frame = +3 Query: 165 AARITCSLQSDIREVASKCADA----AKMAGFALATSALLVSGASAEGAPKRLTFDEIQS 332 A R S ++ +R A A A+ G A A +AL A G+ LTFDEIQ Sbjct: 2 ALRAAQSAKAGVRAARPNRATAVVCKAQKVGQAAAAAALAT--AMVAGSANALTFDEIQG 59 Query: 333 KTYMEVKGTGTANQCPTIDGG 395 TY++VKG+G AN CP ++ G Sbjct: 60 LTYLQVKGSGIANTCPVLESG 80
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 45.4 bits (106), Expect = 3e-05 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +3 Query: 231 AKMAGFALATSALLVSGASAEGA-PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV 398 A +AG A A L+ A A A LT+DE+QS +Y+EVK +G A CP + GV Sbjct: 69 AVLAGAGRAMGAALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGV 125
>LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 635 Score = 35.4 bits (80), Expect = 0.033 Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 18/91 (19%) Frame = -3 Query: 374 LVRGAGTLHLHVGLALDFVEGQPLG----------------RPLRTCARDEEGRGCEGEA 243 LVRG G + + L L V+ Q G RP R+C+ D GC G A Sbjct: 538 LVRGRGAGNGRLPLKLSHVQSQTNGGPSPTPKAHPPRSPPPRPQRSCSLDLGDAGCYGYA 597 Query: 242 GHLGGVGALACDLPDVGLQGA--RDPGGSVD 156 LGG A GL GA R GGS + Sbjct: 598 RRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 628
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 34.3 bits (77), Expect = 0.073 Identities = 35/102 (34%), Positives = 38/102 (37%), Gaps = 4/102 (3%) Frame = -3 Query: 365 GAGTLHLHVGLALDFVEGQPLGRPLRTCARD-EEGRGCEGEAGHLGGVGALACDLPDVGL 189 GA T H H GR R R G G G GG G GL Sbjct: 543 GAPTAHAHAVPGPGPAAATLGGRGRRGSWRGGRRGGGAGASGGGRGGRGRGRGGRRGSGL 602 Query: 188 QGARDPGGSVDAERPGDVRRRPHG---GGPAADLGRHQRGRG 72 G R+ GS A R G+ RRR HG G A R +R RG Sbjct: 603 SGTREDAGSPSARR-GEQRRRGHGPPAAGAAQVSTRGRRARG 643
>CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 4) (Class-IV chitin synthase 4) Length = 1195 Score = 33.5 bits (75), Expect = 0.12 Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 13/136 (9%) Frame = +3 Query: 18 DRSSRVPSPPTNMAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSD 197 +R +R P PT MA+ A L P I G+ + R S + A+G ++ Sbjct: 567 ERGNRKPGLPTTMASQNAAGQLLHPGTIYGQGNESRSSFLKSDAYGSSSSPADGPGPAGF 626 Query: 198 IREVASKCADAAKMA-GFALATSALLVSGASAEGAPKRLTFDEIQSKTYME--------- 347 I E + M GF LA + LV+ S R T D I Y Sbjct: 627 IHEAVVPQPPSDWMPFGFPLAHTICLVTAYSEGEMGVRTTLDSIAMTDYPNSHKVILVIC 686 Query: 348 ---VKGTGTANQCPTI 386 +KG G + P I Sbjct: 687 DGIIKGHGEEHSTPDI 702
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 33.5 bits (75), Expect = 0.12 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +3 Query: 252 LATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTID 389 +AT + G + AP F Q+ TY ++ GTG AN+CPT+D Sbjct: 7 MATLLAVCLGIFSLSAP---AFAAKQTLTYDDIVGTGLANKCPTLD 49
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 33.5 bits (75), Expect = 0.12 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +3 Query: 252 LATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTID 389 +AT + G + AP F Q+ TY ++ GTG AN+CPT+D Sbjct: 7 MATLLAVCLGIFSLSAP---AFAAKQTLTYDDIVGTGLANKCPTLD 49
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 32.7 bits (73), Expect = 0.21 Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Frame = -3 Query: 317 EGQPLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGD 138 +G P + R E RG GE G+ G G D GL G R P G+V PG+ Sbjct: 435 KGGPGAKGERGDPGPEGPRGLPGEVGNKGARG-------DQGLPGPRGPTGAVG--EPGN 485 Query: 137 VRRRPHGG--GPAADLG----RHQRGR 75 + R G GP D G + RGR Sbjct: 486 IGSRGDPGDLGPRGDAGPPGPKGDRGR 512
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 32.3 bits (72), Expect = 0.28 Identities = 25/76 (32%), Positives = 30/76 (39%) Frame = +1 Query: 169 PGSRAPCNPTSGRSQASAPTPPRWXXXXXXXXXXXXXXXVRRGRPRG*PSTKSRARPTWR 348 P S P PT S P PP V R +P P+T S +PT Sbjct: 1885 PTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQP---PTTVSTGKPTS- 1940 Query: 349 *RVPAPRTSARPSTAA 396 +VPAP A+P AA Sbjct: 1941 -QVPAPPPPAQPPPAA 1955
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 32.3 bits (72), Expect = 0.28 Identities = 34/93 (36%), Positives = 36/93 (38%), Gaps = 11/93 (11%) Frame = -3 Query: 338 GLALDFVEGQPLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPD-----VGLQGAR- 177 G A + E P G P D G GEAGH G GAL P G QG + Sbjct: 352 GRAGELGEAGPSGEP--GVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKG 409 Query: 176 ---DPGGSVDAERPGDVRRRPHGG--GPAADLG 93 DPG GDV R GG GP D G Sbjct: 410 SMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQG 442
>LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 636 Score = 32.0 bits (71), Expect = 0.36 Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 19/92 (20%) Frame = -3 Query: 374 LVRGAGTLHLHVGLALDFVEGQPLG----------------RPLRTCARD-EEGRGCEGE 246 LVRG G + + L L V+ Q G RP R+C+ D + GC G Sbjct: 538 LVRGRGAGNGRLPLKLSHVQSQTNGGTSPMPKSHPPRSPPPRPQRSCSLDLGDTGGCYGY 597 Query: 245 AGHLGGVGALACDLPDVGLQGA--RDPGGSVD 156 A LGG A GL GA R GGS + Sbjct: 598 ARRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 629
>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1| Length = 468 Score = 32.0 bits (71), Expect = 0.36 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +3 Query: 6 NHE*DRSSRVPSPPTNMAASFQAAATLMPAKIGGRASSVR------PSSHVARAFG 155 +H + VP PP + + + +LMP + GG +SS+R P S++ A+G Sbjct: 160 HHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYG 215
>ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (Zinc finger| DHHC domain-containing protein 18) (DHHC-18) Length = 388 Score = 31.6 bits (70), Expect = 0.47 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Frame = +1 Query: 139 SPGRSASTLPPGSRAP---CNPTSGRSQA--SAPTPPRW 240 SPG + PG+R P +PT G A +AP PPRW Sbjct: 10 SPGAAPLPASPGARRPGPAASPTPGPGPAPPAAPAPPRW 48
>CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family member 1)| (LAGE-1 protein) (ESO-2 protein) Length = 210 Score = 31.2 bits (69), Expect = 0.62 Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 14/74 (18%) Frame = -3 Query: 269 EGRGCEGEAGHLGGVGALACDLPD-----------VGLQGARDP--GGSVDAERP-GDVR 132 EGRG G G G G +PD G G R P G+ A P G Sbjct: 4 EGRGTGGSTGDADGPGGPG--IPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAP 61 Query: 131 RRPHGGGPAADLGR 90 R PHGG +A GR Sbjct: 62 RGPHGGAASAQDGR 75
>CRP_MOUSE (P14847) C-reactive protein precursor| Length = 225 Score = 31.2 bits (69), Expect = 0.62 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +3 Query: 27 SRVPSPPTNMAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAA 167 S +P PT++ AS+++A ++ I G+A VR S H G DA+ Sbjct: 106 SEIPEAPTHICASWESATGIVEFWIDGKA-KVRKSLHKGYTVGPDAS 151
>PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34| Length = 515 Score = 30.8 bits (68), Expect = 0.81 Identities = 26/82 (31%), Positives = 30/82 (36%) Frame = -3 Query: 266 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 87 G G G AG GG G L G G P G+ D GD R + GG +G Sbjct: 228 GLGKAGFAGGAGGTGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGN-GGDGGSVGAA 286 Query: 86 QRGRGLERRCHVGRWAWYAGRS 21 G G G W + G S Sbjct: 287 PTGIGNGGNGGNGGWLYGDGGS 308
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 8/65 (12%) Frame = -3 Query: 260 GCEGEAGHLGGVGAL-----ACDLPDVGLQGAR-DPGGSVDAERPGDVRRRPHGGGP--A 105 G +GE GH+G +G + A + D GL G + PG D PG + H G P A Sbjct: 1397 GPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVA 1456 Query: 104 ADLGR 90 LG+ Sbjct: 1457 GPLGQ 1461
>CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like protein 2)| Length = 1285 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -3 Query: 350 HLHVGLALDFVEGQPLGRPLRTCARDEEGRGC 255 H+HVG L + QP G P R C +D GC Sbjct: 744 HVHVGGRLLAADSQPWGGPFRGCLQDLRLDGC 775
>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 30.4 bits (67), Expect = 1.1 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 13/89 (14%) Frame = +3 Query: 168 ARITCSLQSDIREVASK--CADAAKMAGFALATSALLVSGASAEGA-----------PKR 308 AR+ SL++ I K C A + G T ++ A+ +G+ P Sbjct: 1678 ARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVG 1737 Query: 309 LTFDEIQSKTYMEVKGTGTANQCPTIDGG 395 L+ D +++K Y G GT N+C +DGG Sbjct: 1738 LSIDYVENKLYWISSGNGTINRC-NLDGG 1765
>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 30.4 bits (67), Expect = 1.1 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 13/89 (14%) Frame = +3 Query: 168 ARITCSLQSDIREVASK--CADAAKMAGFALATSALLVSGASAEGA-----------PKR 308 AR+ SL++ I K C A + G T ++ A+ +G+ P Sbjct: 1678 ARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVG 1737 Query: 309 LTFDEIQSKTYMEVKGTGTANQCPTIDGG 395 L+ D +++K Y G GT N+C +DGG Sbjct: 1738 LSIDYVENKLYWISSGNGTINRC-NLDGG 1765
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Frame = -3 Query: 170 GGSVDAERPGDVRRRPHGG--GPAADLGRHQRGRG--LERRCHVGRWAWYAG 27 G ++ A PG +R R GG G GR RGRG RR G W AG Sbjct: 1378 GAALPARGPGGLRGRGRGGRGGGGGGGGRGPRGRGGRRRRRWRPGAGEWGAG 1429 Score = 27.3 bits (59), Expect = 8.9 Identities = 28/79 (35%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Frame = -3 Query: 266 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERP----------GDVRRRPHG 117 G G EG+ G GG G D P R P P G RRR G Sbjct: 251 GEGGEGDRGTAGG-GEGDRDDPPPPSPPPRPPPPLPPPPPPPPPPQPPPAGGSARRRRRG 309 Query: 116 GGPAADLGRHQRGRGLERR 60 GGP GR R RG +RR Sbjct: 310 GGPP---GRGGRRRGGKRR 325
>FA21C_PONPY (Q5RDC1) Protein FAM21C| Length = 1340 Score = 30.0 bits (66), Expect = 1.4 Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 2/108 (1%) Frame = +3 Query: 48 TNMAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 227 ++ +AS A L+P K+ S FG AA R T SLQ+ E A Sbjct: 548 SSQSASKLKGAPLLPGKLPTSVSLFEDEDEEDNLFGGTAAKRQTLSLQAQGEEKAKASEL 607 Query: 228 AAKMAGFALATSALLVSGASAE--GAPKRLTFDEIQSKTYMEVKGTGT 365 + K A SALL S + P T S++ E + +GT Sbjct: 608 SKKKA------SALLFSSDEEDQWNIPASQTHSASDSRSKGESRDSGT 649
>IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precursor (CD81| partner 3) (Glu-Trp-Ile EWI motif containing protein 2) (EWI-2) (Keratinocytes-associated transmembrane protein 4) (KCT-4) (Prostaglandin regulatory-like protein) (CD316 antigen) Length = 611 Score = 30.0 bits (66), Expect = 1.4 Identities = 29/76 (38%), Positives = 30/76 (39%), Gaps = 5/76 (6%) Frame = -3 Query: 320 VEGQPLGRPLRTC---ARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAE 150 V G P G L R EEG G A +GGVG V G R GG V E Sbjct: 464 VRGGPPGLRLAASWWVERPEEGELSSGPAQLVGGVGQ-----DGVAELGVRPGGGPVSVE 518 Query: 149 --RPGDVRRRPHGGGP 108 P R R HG GP Sbjct: 519 LVGPRSHRLRLHGLGP 534
>AVEN_HUMAN (Q9NQS1) Cell death regulator Aven| Length = 362 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -3 Query: 185 GARDPGGSVDAERPG---DVRRRPHGGGPAADLGRHQRGRG 72 G PGG +ERPG V R GGG GR RGRG Sbjct: 16 GRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRG 56
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = -3 Query: 260 GCEGEAGHLGGVGALACDLPDVGLQGARDPGG---SVDAERPGDVRRRPHGGGPAADLG 93 G +G GH GG G + + + G G P G SV + P +R P GPA D G Sbjct: 186 GFKGHTGHKGGPGEIGKE-GEKGSPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAGDRG 243
>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) Length = 553 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -3 Query: 266 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAAD 99 G G G AG GG G C+L + L A + GG + G GG A D Sbjct: 377 GGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGG-------AGGSAVD 425
>CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar collagen)| (Fragment) Length = 547 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/58 (36%), Positives = 29/58 (50%) Frame = -3 Query: 263 RGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGR 90 +G +GE G L G+ + G G P G+ A +PG +R +P GP DLGR Sbjct: 27 QGPDGEPG-LPGLPGQSGKSGASGQPGVPGPVGA--AGKPGSIRGQPGPPGPPGDLGR 81
>FA21C_HUMAN (Q9Y4E1) Protein FAM21C| Length = 1320 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = +3 Query: 48 TNMAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 227 ++ +AS A+L+P K+ S FG AA + T SLQ+ RE +K ++ Sbjct: 549 SSQSASNLKGASLLPGKLPTSVSLFDDEDEEDNLFGGTAAKKQTLSLQAQ-REEKAKASE 607 Query: 228 AAKMAGFALATSA 266 +K AL S+ Sbjct: 608 LSKKKASALLFSS 620
>XYNA_ASPKA (P33559) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase| A) (1,4-beta-D-xylan xylanohydrolase A) Length = 327 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -1 Query: 169 AAASTPNARATCDDGRTEEARPPILAG-ISVAAAWKDAAMLVGGLGTR 29 A A+ PNA+ +D + A P LAG +S W +A + + G+G++ Sbjct: 186 ARAADPNAKLYINDYNLDSASYPKLAGMVSHVKKWIEAGIPIDGIGSQ 233
>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3| (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID) Length = 757 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = -3 Query: 182 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 72 A P G PG R P G PAA +GRH G G Sbjct: 49 AASPAGPPAPRGPGGRRAEPCPGLPAAAMGRHGGGGG 85
>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)| Length = 747 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/65 (32%), Positives = 28/65 (43%) Frame = -3 Query: 266 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 87 G +G G LGG GA +G QGA G+ A G + +GG + GR Sbjct: 11 GGAGQGGYGGLGGQGAGQGGYGGLGGQGAGQGAGAAAAAAAGGAGQGGYGGLGSQGAGRG 70 Query: 86 QRGRG 72 +G G Sbjct: 71 GQGAG 75
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/64 (34%), Positives = 23/64 (35%) Frame = -3 Query: 302 GRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRP 123 GRP R GR G G+ GG GA PG A G R RP Sbjct: 272 GRPGRPGGAPGAGRPGGGGGGYRGGGGA---------------PGAGAGAPAGGGFRGRP 316 Query: 122 HGGG 111 GGG Sbjct: 317 GGGG 320
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 26.2 bits (56), Expect(2) = 2.6 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%) Frame = +3 Query: 36 PSPPTNMAASFQAAATLMPA--KIGGRA--SSVRPSSHVAR 146 P PP + A+S QAAA P+ ++ R S+ RPSS AR Sbjct: 235 PRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPAR 275 Score = 21.6 bits (44), Expect(2) = 2.6 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 3/32 (9%) Frame = +1 Query: 148 RSASTLPPGSRAPCNPTSGRSQAS---APTPP 234 R+ + P R P PT R +A+ +P PP Sbjct: 300 RAPAGCSPARRTPSAPTDRRCRAARRGSPRPP 331
>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 1008 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +1 Query: 139 SPGRSASTLPPGSRAPCNPTSGRS-QASAPTPPR 237 SP A+ PPG R N T S +ASAP PPR Sbjct: 776 SPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPR 809
>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa| 1-like protein 1) Length = 1859 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = +3 Query: 45 PTNMAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITC 182 PT +AAS Q L+ +K G +S SS VA+ A A I C Sbjct: 1044 PTKVAASTQIMKALLGSKPGRPSSLPEVSSTVAQRLSSSAGAFIAC 1089
>THIC_RHOPA (P61427) Thiamine biosynthesis protein thiC| Length = 666 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Frame = +3 Query: 180 CSLQ--SDIREVASKCADAAKMAGFALATSALLVSGASAEG-APKRLTFDEIQSKTYMEV 350 CS++ D+R+ A+ D K A + + + + +SG +G A F E+ S Y++ Sbjct: 596 CSMKITQDVRDYAAGLGDNEKAALYPVGHAGMTISGTIEDGMAQMSAKFKEMGSSVYLDA 655 Query: 351 KGTGTANQ 374 + +N+ Sbjct: 656 EKVKESNK 663
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -3 Query: 182 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 72 A P AE+PGD RP GPA GR + G G Sbjct: 552 AAQPPSPSSAEKPGDEPGRPRSRGPA---GRTEPGEG 585
>ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 480 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/39 (46%), Positives = 20/39 (51%) Frame = +3 Query: 27 SRVPSPPTNMAASFQAAATLMPAKIGGRASSVRPSSHVA 143 S VP+PP AAAT P + GRA RPS VA Sbjct: 282 SPVPAPPPGPPRPAAAAATTAPL-VNGRAGKRRPSRLVA 319
>VGLD_BHV1P (P24906) Glycoprotein D precursor (Glycoprotein IV)| Length = 417 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = -3 Query: 281 ARDEEGR------GCEGEAGHLGGVGALACDLPDV--GLQGARDPGGSVDAERP 144 AR++EG G EG G G G P+ G +G PG S DA+RP Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESQTPEANGGAEGEPKPGPSPDADRP 336
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/77 (23%), Positives = 33/77 (42%) Frame = +1 Query: 166 PPGSRAPCNPTSGRSQASAPTPPRWXXXXXXXXXXXXXXXVRRGRPRG*PSTKSRARPTW 345 PP RA +P S R + +P P + R+G P + ++R+ P Sbjct: 613 PPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNRETRSPPQN 672 Query: 346 R*RVPAPRTSARPSTAA 396 + P+PR A ++++ Sbjct: 673 KRDSPSPRPRASHTSSS 689
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/76 (31%), Positives = 29/76 (38%) Frame = +1 Query: 169 PGSRAPCNPTSGRSQASAPTPPRWXXXXXXXXXXXXXXXVRRGRPRG*PSTKSRARPTWR 348 P S P PT S P PP V R +P P+ S +PT Sbjct: 1886 PTSAPPGTPTQQPSTPQTPQPPAQPQPSPVNMSPAGFPNVARTQP---PTIVSAGKPT-- 1940 Query: 349 *RVPAPRTSARPSTAA 396 +VPAP A+P AA Sbjct: 1941 NQVPAPPPPAQPPPAA 1956
>OCD1_RHIME (P58338) Ornithine cyclodeaminase 1 (EC 4.3.1.12) (OCD 1)| Length = 329 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Frame = +3 Query: 123 RPSSHVARAFGVDAAARI---TCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 293 R S VA FG AR+ +L IRE DAAK A+A L AE Sbjct: 129 REDSSVAAVFGAGMQARLQLEALALVRPIREARIWARDAAKAEAAAIALGGKLGFAVKAE 188 Query: 294 GAPK 305 P+ Sbjct: 189 TDPR 192
>NH103_CAEEL (O16359) Nuclear hormone receptor family member nhr-103| Length = 394 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = -2 Query: 342 CRSCSGFRRRSASWA 298 CRSC+ F RRSA+W+ Sbjct: 28 CRSCAAFFRRSATWS 42
>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)| Length = 637 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -3 Query: 278 RDEEGRGCEGEAGHLGGVGALACDLP--DVGLQGARDPGGSVDAERPGDVRRRPHGGG 111 R E R EG+A GA +P V +G+ D GGSVDA D GG Sbjct: 129 RGEAAREAEGQAAAPAAPGAQEEAVPGDSVDAEGSIDAGGSVDAAGSVDAGGSIDAGG 186
>VGLD_BHV1S (Q08100) Glycoprotein D precursor (Glycoprotein IV)| Length = 417 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = -3 Query: 281 ARDEEGRGCEGEAGHLG--------GVGALACDLPDVGLQGARDPGGSVDAERP 144 AR++EG +G AG G G G + G +G PG S DA+RP Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESPTPEANGGAEGEPKPGPSPDADRP 336
>ZCHC3_HUMAN (Q9NUD5) Zinc finger CCHC domain-containing protein 3| Length = 404 Score = 28.5 bits (62), Expect = 4.0 Identities = 36/120 (30%), Positives = 39/120 (32%), Gaps = 36/120 (30%) Frame = -3 Query: 299 RPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGG--------SVDAE-- 150 R R R+EE G G AG G G A DL D G DP G +VD Sbjct: 55 REPRPPRREEESGGGGGSAGLGGPAGLAAPDLGDFPPAGRGDPKGRRRDPAGEAVDPRKK 114 Query: 149 -----------------------RPG---DVRRRPHGGGPAADLGRHQRGRGLERRCHVG 48 RPG D RP PAA +GR L R C G Sbjct: 115 KGAAEAGRRKKAEAAAAAMATPARPGEAEDAAERPLQDEPAAAAAGPGKGRFLVRICFQG 174
>TRPE2_HALSA (Q9HS66) Anthranilate synthase component 1 2 (EC 4.1.3.27)| (Anthranilate synthase component I 2) Length = 488 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = -3 Query: 380 RALVRGAGTLHLHVGLALDFVEGQPLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLP 201 R LVR A T HL VG + + P T A+ R G GG+G +A P Sbjct: 430 RTLVRRAATYHLRVGAGI-VHDSTPAAEYDETLAK---ARALVTALGDAGGIGRVADTTP 485 Query: 200 D 198 D Sbjct: 486 D 486
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 7/59 (11%) Frame = -3 Query: 266 GRGCEGEAGHLGGVGALACDLPDVGLQG-ARDPGGSVDAER------PGDVRRRPHGGG 111 GR G G G G + + G G AR PGG A R PG RRP GGG Sbjct: 488 GRPSGGRPGPGGNRGPASANRGPGGPGGGARGPGGPGGAPRGPGGRPPGGGNRRPPGGG 546
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 28.1 bits (61), Expect = 5.2 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +3 Query: 336 TYMEVKGTGTANQCPTI 386 TY +++GTG AN+CP + Sbjct: 34 TYEQIRGTGLANKCPQL 50
>OPN4_HUMAN (Q9UHM6) Melanopsin (Opsin-4)| Length = 478 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +1 Query: 166 PPGSRAPCNPTSGRSQASAPTPPRW 240 P G R P +PT S + P PP W Sbjct: 4 PSGPRVPPSPTQEPSCMATPAPPSW 28
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 28.1 bits (61), Expect = 5.2 Identities = 28/66 (42%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -3 Query: 260 GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRR--PHGGGPAADLGRH 87 G GE G G G LP G QGA G V A PGD +R P GP LGR Sbjct: 1059 GAVGERGDRGDPGPAG--LP--GSQGAPGTPGPVGA--PGDAGQRGDPGSRGPIGHLGRA 1112 Query: 86 QRGRGL 69 + RGL Sbjct: 1113 GK-RGL 1117
>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 932 Score = 28.1 bits (61), Expect = 5.2 Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 3/84 (3%) Frame = +1 Query: 139 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPPRWXXXXXXXXXXXXXXXVRRGRPR---G 309 SP A+ PPG R N T S + PPR V P+ G Sbjct: 691 SPSAEAAAPPPGPRTRDNFTKAPSWDAGAPPPREDAGTQAGAQACVSVAVSPMSPQDGAG 750 Query: 310 *PSTKSRARPTWR*RVPAPRTSAR 381 P+ +A P R PAPR +R Sbjct: 751 GPAFSFQAAP--RAPSPAPRPPSR 772
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +1 Query: 139 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 234 SPGRS PP S P P S P PP Sbjct: 340 SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 371
>NIR_BETVE (P38500) Ferredoxin--nitrite reductase, chloroplast precursor (EC| 1.7.7.1) Length = 583 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -3 Query: 281 ARDEEGRGCEGEAGHLGG 228 ARDE G+ CEG A LGG Sbjct: 521 ARDENGKPCEGAAVFLGG 538
>KCNC3_RAT (Q01956) Potassium voltage-gated channel subfamily C member 3| (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID) Length = 889 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -3 Query: 182 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 72 A P G+ + PG R P G PA +GRH G G Sbjct: 51 AASPAGAPLSCGPGGRRAEPCSGLPAVAMGRHGGGGG 87
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +1 Query: 139 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 234 SPGRS PP S P P S P PP Sbjct: 350 SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 28.1 bits (61), Expect = 5.2 Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Frame = -3 Query: 317 EGQPL--GRPLRTCARDEEGR-GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAER 147 +GQP G P R E G G G GH G G + + G +G P G A Sbjct: 1018 DGQPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKN-GDRGETGPAGPSGAPG 1076 Query: 146 PGDVRRRPHGGGPAADLG 93 P R P GP D G Sbjct: 1077 PAGARGAPGPQGPRGDKG 1094
>RPOB_THEMA (P29398) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1263 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 23 IFPRTKPTDQHGSVFPSRGHADAGQD 100 I P T P D+ G++ P R A G+D Sbjct: 659 IIPATTPVDEEGNIIPERVVARMGED 684
>CTG1B_HUMAN (P78358) Cancer/testis antigen 1B (L antigen family member 2)| (LAGE-2 protein) (Autoimmunogenic cancer/testis antigen NY-ESO-1) Length = 180 Score = 27.7 bits (60), Expect = 6.8 Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 15/85 (17%) Frame = -3 Query: 269 EGRGCEGEAGHLGGVGALACDLPD-----------VGLQGARDP--GGSVDAERPGD-VR 132 EGRG G G G G +PD G G R P G+ A PG Sbjct: 4 EGRGTGGSTGDADGPGGPG--IPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGAP 61 Query: 131 RRPHGGGPAADLGRHQRG-RGLERR 60 R PHGG + G + G RG E R Sbjct: 62 RGPHGGAASGLNGCCRCGARGPESR 86
>IP3KC_HUMAN (Q96DU7) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase C) (InsP 3-kinase C) (IP3K-C) Length = 683 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = -3 Query: 254 EGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAA 102 E EAG L + + P G + R PG G RP GGGP A Sbjct: 12 EAEAGALPAAARMGLEAPRGGRR--RQPGQQRPGPGAGAPAGRPEGGGPWA 60
>RPOB_DECAR (Q47JB0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1427 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Frame = +3 Query: 57 AASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAAK 236 A+ + + +P+ I G V+ V G++ R + +R AD + Sbjct: 985 ASDVKDTSLRVPSGIAGTVIDVQ----VFTREGIERDKRAQAIIDEHLRHYKLDLADQMR 1040 Query: 237 MAGF-ALATSALLVSGASAEGAPKRLTFDEIQSKTYME 347 + A A L++G A G PK+L + K Y++ Sbjct: 1041 IVERDAFARVERLITGKKANGGPKKLAKGTVIDKVYLD 1078
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/56 (33%), Positives = 22/56 (39%) Frame = -3 Query: 260 GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLG 93 G +GE G G G D + G GAR P G+ A P GPA G Sbjct: 643 GTKGEKGDAGNSG----DYGNPGRDGARGPAGAAGAPGPAGGPGDRGESGPAGPSG 694
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 8/65 (12%) Frame = -3 Query: 260 GCEGEAGHLGGVGALACDLPD--------VGLQGARDPGGSVDAERPGDVRRRPHGGGPA 105 G G+ GH G GA PD G QG + G P + P GPA Sbjct: 505 GKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGPA 564 Query: 104 ADLGR 90 ++G+ Sbjct: 565 GEVGK 569
>NUPL2_XENLA (Q5XGN1) Nucleoporin-like 2| Length = 491 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/75 (32%), Positives = 32/75 (42%) Frame = +3 Query: 57 AASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAAK 236 AA FQ AA + A G ASS P+S FG T + S +R++ S Sbjct: 348 AAGFQGAANIAAAPAFGVASSTAPASGFGGGFGTTVN---TGAKTSSVRDLFS------- 397 Query: 237 MAGFALATSALLVSG 281 AG A+ L+ G Sbjct: 398 -AGTAVPVQTTLLFG 411
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 142 PGRSASTLPPGSRAPCNPTSGRSQASAP 225 PG TLPPG P P + R A AP Sbjct: 597 PGPIRPTLPPGILGPLAPNTPRPPAQAP 624
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -3 Query: 278 RDEEGR-GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAA 102 + E+G G EG+AG G DL D+GL GA+ GSV PGD P GP Sbjct: 673 KGEQGAPGSEGDAGEKG-------DLGDMGLPGAK---GSVG--NPGD----PGSRGPEG 716 Query: 101 DLG 93 G Sbjct: 717 SRG 719
>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) Length = 577 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +3 Query: 27 SRVPSPPTNMAASFQAAATLMPAK 98 S VPSPP N+AA +AA + PA+ Sbjct: 386 SAVPSPPKNVAAEQKAAPSPAPAE 409
>TNPA_STRFR (P20189) Transposase for transposon Tn4556| Length = 892 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = -1 Query: 145 RATCDDGRTEEA----RPPILAGISVAAAWKDAAMLVGGLG 35 RA DDGR E + G + AAAW D A GGLG Sbjct: 4 RAGLDDGRGAEGVVRRGSRVAEGAAGAAAWGDDADEAGGLG 44
>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)| Length = 1147 Score = 27.7 bits (60), Expect = 6.8 Identities = 26/76 (34%), Positives = 26/76 (34%), Gaps = 11/76 (14%) Frame = -3 Query: 266 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPG-----------GSVDAERPGDVRRRPH 120 GRG G G GG G P G G PG G PG R P Sbjct: 1006 GRGGPGMGGP-GGPGRGGPGGPGAGRGGPGGPGAGRGGPGMGGPGGAGRGGPGAGRGGPG 1064 Query: 119 GGGPAADLGRHQRGRG 72 GGP A G GRG Sbjct: 1065 MGGPGAGRGGPGAGRG 1080
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = -3 Query: 266 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLG 93 G+G +GE G G +G+ G GAR G++ A P GPA G Sbjct: 651 GKGEKGETGLRGDIGS-------PGRDGARGAPGAIGAPGPAGANGDRGEAGPAGPAG 701 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 8/65 (12%) Frame = -3 Query: 260 GCEGEAGHLGGVGALACDLPD--------VGLQGARDPGGSVDAERPGDVRRRPHGGGPA 105 G GE GH G GA PD GLQG + G P + P G A Sbjct: 503 GKAGEKGHAGLAGARGAPGPDGNNGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTA 562 Query: 104 ADLGR 90 + G+ Sbjct: 563 GEAGK 567
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 17/74 (22%) Frame = -3 Query: 263 RGCEGEAGHLGGVGA-----------LACDLPDVGLQGAR----DPGGSVDAERPGDVRR 129 +G EG+ G LG VGA + + D G +GAR +PG PGD + Sbjct: 447 KGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQ 506 Query: 128 R--PHGGGPAADLG 93 R P GP D G Sbjct: 507 RGPPGEAGPKGDRG 520
>CL43_BOVIN (P42916) Collectin-43 precursor (CL-43) (43 kDa collectin)| Length = 321 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Frame = -3 Query: 260 GCEGEAGHLGGVGA--LACDLPDVGLQGAR---DPGGSVDAERPGDVRRRPHGGGPAADL 96 G +GE G GGVGA + GL+G R PGG++ + P P G D Sbjct: 94 GPKGEPGPEGGVGAPGMPGSPGPAGLKGERGTPGPGGAIGPQGPSGAMGPPGLKGDRGDP 153 Query: 95 G 93 G Sbjct: 154 G 154
>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (G0/G1 switch regulatory protein 24) Length = 326 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +1 Query: 145 GRSASTLPPGSRAPCNPTSGRSQASAPTPP 234 GR S PPG P +S S +S+P PP Sbjct: 193 GRRTSPPPPGLAGPSLSSSSFSPSSSPPPP 222
>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing| protein A) (Single-strand DNA-binding protein NF-GMB) Length = 372 Score = 27.7 bits (60), Expect = 6.8 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +3 Query: 24 SSRVPSPPTNMAASF-QAAATLMPAKIGG-RASSVRPSSHVARAFGVDAAARITCSLQSD 197 ++ +P PT AA+ Q A P G +A++ P++HVA G DAA T + + Sbjct: 12 TTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAA 71 Query: 198 IREVASKCADAAKMAGFALATSAL 269 A+ DA K LAT L Sbjct: 72 SLATAAGSEDAEKK---VLATKVL 92
>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)| Length = 926 Score = 27.7 bits (60), Expect = 6.8 Identities = 26/83 (31%), Positives = 36/83 (43%) Frame = +3 Query: 54 MAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAA 233 +AA AAAT PA A++ P++ V+ A V AA I+ AA Sbjct: 706 VAAPAAAAATPSPANAAALAAAAAPATSVSAATSVSAANSIS---------------PAA 750 Query: 234 KMAGFALATSALLVSGASAEGAP 302 +A A+ A VS A+A P Sbjct: 751 PVAPAAVVPPAAPVSPAAAVQIP 773
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 27.7 bits (60), Expect = 6.8 Identities = 26/78 (33%), Positives = 29/78 (37%), Gaps = 3/78 (3%) Frame = -3 Query: 317 EGQPL--GRPLRTCARDEEGR-GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAER 147 +GQP G P R E G G G GH G G + G +G P G A Sbjct: 1018 DGQPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKS-GDRGETGPAGPSGAPG 1076 Query: 146 PGDVRRRPHGGGPAADLG 93 P R P GP D G Sbjct: 1077 PAGARGAPGPQGPRGDKG 1094
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +1 Query: 139 SPGRSASTLPPGSRAPCNPTSGRSQASAPTP 231 +PGR + PGS P P +A AP P Sbjct: 167 TPGRPGTDAAPGSPGPRGPPGPAGEAGAPGP 197
>LIFO_PSEAE (Q01725) Lipase chaperone (Lipase foldase) (Lipase helper protein)| (Lipase modulator) Length = 340 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +3 Query: 39 SPPTNMAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREV 209 +PP A A +MPAK+ +S R +S V +F VDA+ + + DIR + Sbjct: 43 APPAASAGEAVPAPQVMPAKVAPLPTSFRGTS-VDGSFSVDASGNLL--ITRDIRNL 96
>TXLNA_HUMAN (P40222) Alpha-taxilin| Length = 546 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 Query: 142 PGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 237 PG A + P + APC P + ++AS T P+ Sbjct: 508 PGAQAPSSPRVTEAPCYPGAPSTEASGQTGPQ 539
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 27.3 bits (59), Expect = 8.9 Identities = 24/77 (31%), Positives = 28/77 (36%), Gaps = 2/77 (2%) Frame = +1 Query: 160 TLPPGSRAPCNPTSGRSQASAPTPPRWXXXXXXXXXXX--XXXXVRRGRPRG*PSTKSRA 333 T P R P PTS +P PP + G G P ++ Sbjct: 2826 TAPVLGRNPAEPTSSSPAGPSPPPPAVQPVAPPPTSGPPPTYLTLEGGVAPGGPVSR--- 2882 Query: 334 RPTWR*RVPAPRTSARP 384 RPT R V P TSARP Sbjct: 2883 RPTTRQPVATPTTSARP 2899
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/88 (23%), Positives = 30/88 (34%) Frame = +1 Query: 139 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPPRWXXXXXXXXXXXXXXXVRRGRPRG*PS 318 SP +T PP + P PT+ + T P P P+ Sbjct: 1587 SPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT 1646 Query: 319 TKSRARPTWR*RVPAPRTSARPSTAAST 402 T + PT P+P T+ PS +T Sbjct: 1647 TTTTPPPT---TTPSPPTTTTPSPPITT 1671
>MUC1_MESAU (Q60528) Mucin-1 precursor| Length = 676 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = +1 Query: 136 TSPGRSASTLPPGSRAPCNPTS-GRSQASAP 225 T+PG S S+ PP S A + T+ G S +SAP Sbjct: 58 TTPGHSGSSAPPTSSAVNSATTPGHSGSSAP 88
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/37 (51%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -3 Query: 272 EEG-RGCEGEAGHLGGVGALACDLPDVGLQGARDPGG 165 EEG RG GEAG G DVG QGAR P G Sbjct: 265 EEGPRGPPGEAGEKG----------DVGSQGARGPQG 291
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 27.3 bits (59), Expect = 8.9 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Frame = -3 Query: 278 RDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDP----GGSVDAERPGDVRRRPHGGG 111 R G+GC+GE G G G G+ GA P G + +A RPG P G Sbjct: 333 RGPPGQGCKGEPGLDGKRGR-------DGVPGAPGPPGHKGDTGEAGRPG----APGPPG 381 Query: 110 PAADLGRHQRGRG 72 P D G G G Sbjct: 382 PTGDPGPKGLGPG 394
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/37 (48%), Positives = 18/37 (48%) Frame = -3 Query: 185 GARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGR 75 G R PGG A RPG RP GGG A G GR Sbjct: 321 GGRGPGG---AGRPGGGGGRPGGGGFAGRPGGGGGGR 354
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing| mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 8/31 (25%) Frame = +1 Query: 166 PPG--------SRAPCNPTSGRSQASAPTPP 234 PPG SRAP PT APTPP Sbjct: 779 PPGPPTPPRRTSRAPIEPTPASEATGAPTPP 809
>EFG1_CANAL (P43064) Enhanced filamentous growth protein| Length = 552 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = +3 Query: 24 SSRVPSPPTNMAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARIT 179 +S P PP +AA+ AAT + G +S+ +S + G A T Sbjct: 329 ASAPPPPPPPVAAATTTAATAISKSSSGNGNSISATSGGSNVSGASGAGSTT 380
>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)| (EBNA-1) Length = 641 Score = 27.3 bits (59), Expect = 8.9 Identities = 27/74 (36%), Positives = 28/74 (37%) Frame = -3 Query: 266 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 87 G G G AG GG GA G R GGS R G R G G GR Sbjct: 304 GAGGAGGAGAGGGAGAGGAGAGG----GGRGRGGSGGRGRGGSGGRGRGGSGGRRGRGR- 358 Query: 86 QRGRGLERRCHVGR 45 +R RG R GR Sbjct: 359 ERARGGSRERARGR 372
>CH603_BRAJA (P35862) 60 kDa chaperonin 3 (Protein Cpn60 3) (groEL protein 3)| Length = 545 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +3 Query: 198 IREVASKCADAAKMAGFALATSALLVSGASAEGA 299 +REVASK ADA AG T+ +L + EGA Sbjct: 73 VREVASKAADA---AGDGTTTATVLAAAIVREGA 103
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 139 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 237 +PG +AST P S P + ++A+AP+P R Sbjct: 831 APGPAASTRPASSSTPRLRPTPAARAAAPSPDR 863
>IF2_SHEON (Q8EHL5) Translation initiation factor IF-2| Length = 885 Score = 27.3 bits (59), Expect = 8.9 Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 1/109 (0%) Frame = +3 Query: 45 PTNMAASFQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCA 224 PT M + +TL A GG++ V+ R F ++ D+ + K Sbjct: 59 PTKMTLQRKTVSTLSVAGNGGQSKDVKVEVRKTRTF-----------VKRDVSDAVLKAE 107 Query: 225 DAAKMAGFALA-TSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTA 368 + AK A A A + A AE K E ++K E K A Sbjct: 108 EEAKAKAEAEAKAKAETEAKAKAEAEAKAKVEAEAKAKAEAEAKAKAKA 156
>RIP6_ORYSA (Q7XD66) Putative ripening-related protein 6 precursor| Length = 167 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Frame = -3 Query: 233 GGVGALACDLPDVGLQGARDPGGSVDAERP----GDVRRRPHGGGPAADLGRHQRGRGLE 66 GG G + LP G++ P S D GGGPAA GR+ R L Sbjct: 34 GGGGGVDSHLPP-GMRRCSSPAVSEDGTPAVMTVNGFEEGEDGGGPAACDGRYHSDRSLV 92 Query: 65 RRCHVGRWAWYAG 27 G W+AG Sbjct: 93 AALSTG---WFAG 102
>M3K4_MOUSE (O08648) Mitogen-activated protein kinase kinase kinase 4 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 4) (MEK kinase 4) (MEKK 4) Length = 1597 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/68 (33%), Positives = 32/68 (47%) Frame = +3 Query: 168 ARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYME 347 +R L + RE ASK AKM L +A V ASA R D +++K Y++ Sbjct: 789 SRALKELFHEARERASKALGFAKMLRKDLEIAAEFVLSASA-----RELLDALKAKQYVK 843 Query: 348 VKGTGTAN 371 V+ G N Sbjct: 844 VQIPGLEN 851
>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor| Length = 1901 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/52 (34%), Positives = 21/52 (40%) Frame = -3 Query: 266 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGG 111 G+G G AG GG G + D P G+ G GG A G GG Sbjct: 556 GQGGTGGAGGAGGAGGVGADNP-TGIGGTGGTGGKGGAGGAGGQGGSSGAGG 606
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/82 (28%), Positives = 31/82 (37%) Frame = +1 Query: 139 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPPRWXXXXXXXXXXXXXXXVRRGRPRG*PS 318 SP RSAS P + +P R ++ +P P R RR R P Sbjct: 524 SPSRSASPSPRKRQKETSPRGRRRRSPSPPPTR------RRRSPSPAPPPRRRRTPTPPP 577 Query: 319 TKSRARPTWR*RVPAPRTSARP 384 + P R R P+PR + P Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPP 599 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,232,528 Number of Sequences: 219361 Number of extensions: 1135513 Number of successful extensions: 5425 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 4784 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5387 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
