ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet52c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
2gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
5ref|XM_463664.1| Oryza sativa (japonica cultivar-group), predic... 80 6e-12
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 80 6e-12
7dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic D... 80 6e-12
8gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome... 50 0.005
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
10gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.005
11ref|NM_185277.1| Oryza sativa (japonica cultivar-group), predic... 46 0.081
12gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.081
13gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, co... 46 0.081
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
15gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.081
16ref|NM_183628.1| Oryza sativa (japonica cultivar-group), predic... 44 0.32
17dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
18dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynt... 44 0.32
19ref|XM_429431.1| PREDICTED: Gallus gallus LOC416444 (LOC416444),... 42 1.3
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.3
21dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.3
22emb|CR846080.8| Zebrafish DNA sequence from clone DKEY-29P9 in l... 42 1.3
23emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster 42 1.3
24ref|NM_184024.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
25gb|AC111064.11| Mus musculus chromosome 1, clone RP23-245H20, co... 40 5.0
26gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Can... 40 5.0
27gb|AY271660.1| Actinomadura madurae maduropeptin biosynthesis ge... 40 5.0
28gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5... 40 5.0
29gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 5.0
30emb|AL109940.18|HSJ421D16 Human DNA sequence from clone RP3-421D... 40 5.0
31emb|X15540.1|TBPGIG T.brucei pgi gene for glucose-6-phosphate is... 40 5.0
32gb|AC158555.6| Mus musculus chromosome 3, clone RP23-14B10, comp... 40 5.0
33gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.0
34gb|AC025173.5|AC025173 Homo sapiens chromosome 5 clone CTD-2036C... 40 5.0
35gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana... 40 5.0
36dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
37dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
38emb|BX649357.5| Mouse DNA sequence from clone RP23-364J19 on chr... 40 5.0
39dbj|AK071594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
40emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.0
41gb|AF108814.1|AF108814 Petromyzon marinus homeobox protein SIX4 ... 40 5.0
42gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.0
43gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.0
44emb|CR854964.10| Zebrafish DNA sequence from clone DKEY-58J19 in... 40 5.0
45gb|AC159709.8| Mus musculus 10 BAC RP23-136O17 (Roswell Park Can... 40 5.0 
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0008H02, complete sequence
          Length = 143438

 Score =  131 bits (66), Expect = 2e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                        
Query: 178  ctggtgtcgccggtggaggcgacgccaataggggagcagtactacctgtccaacctggac 237
            |||||| |||||| |||||||||||| |  |||||| |||||||||||||||||||||||
Sbjct: 2723 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 2782

                                                      
Query: 238  cagaacatcgcggtgatcgtgcagaccgtgtactgcttcaag 279
            ||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 2783 cagaacatcgccgtgatcgtgcagacggtgtactgctacaag 2824
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>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0028G07, complete sequence
          Length = 157463

 Score =  131 bits (66), Expect = 2e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                         
Query: 178   ctggtgtcgccggtggaggcgacgccaataggggagcagtactacctgtccaacctggac 237
             |||||| |||||| |||||||||||| |  |||||| |||||||||||||||||||||||
Sbjct: 89040 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 89099

                                                       
Query: 238   cagaacatcgcggtgatcgtgcagaccgtgtactgcttcaag 279
             ||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 89100 cagaacatcgccgtgatcgtgcagacggtgtactgctacaag 89141
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  131 bits (66), Expect = 2e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                            
Query: 178      ctggtgtcgccggtggaggcgacgccaataggggagcagtactacctgtccaacctggac 237
                |||||| |||||| |||||||||||| |  |||||| |||||||||||||||||||||||
Sbjct: 17495026 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 17495085

                                                          
Query: 238      cagaacatcgcggtgatcgtgcagaccgtgtactgcttcaag 279
                ||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 17495086 cagaacatcgccgtgatcgtgcagacggtgtactgctacaag 17495127
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  131 bits (66), Expect = 2e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                            
Query: 178      ctggtgtcgccggtggaggcgacgccaataggggagcagtactacctgtccaacctggac 237
                |||||| |||||| |||||||||||| |  |||||| |||||||||||||||||||||||
Sbjct: 17588736 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 17588795

                                                          
Query: 238      cagaacatcgcggtgatcgtgcagaccgtgtactgcttcaag 279
                ||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 17588796 cagaacatcgccgtgatcgtgcagacggtgtactgctacaag 17588837
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>ref|XM_463664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1329

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                       
Query: 217 tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276
           |||||||| |||||||| |||||||||||||| || |||||||||||||| |||||||||
Sbjct: 115 tactacctctccaacctcgaccagaacatcgccgtcatcgtgcagaccgtctactgcttc 174
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                            
Query: 217      tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276
                |||||||| |||||||| |||||||||||||| || |||||||||||||| |||||||||
Sbjct: 40501532 tactacctctccaacctcgaccagaacatcgccgtcatcgtgcagaccgtctactgcttc 40501591



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 186      gccggtggaggcgacgccaatagggg 211
                |||||||||||||||| |||||||||
Sbjct: 10672604 gccggtggaggcgacggcaatagggg 10672629



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 346      gtgcactaccacccgctcgccggc 369
                ||||||||| ||||||||||||||
Sbjct: 13940647 gtgcactactacccgctcgccggc 13940670
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>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1033B05
          Length = 138882

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                         
Query: 217   tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276
             |||||||| |||||||| |||||||||||||| || |||||||||||||| |||||||||
Sbjct: 63156 tactacctctccaacctcgaccagaacatcgccgtcatcgtgcagaccgtctactgcttc 63215
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>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0050N08, complete sequence
          Length = 144593

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 217   tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276
             |||||||| |||||||| ||||||||||||||  |  | ||||||||||| |||| ||||
Sbjct: 87921 tactacctctccaacctcgaccagaacatcgccatcgttgtgcagaccgtctactacttc 87980

              
Query: 277   a 277
             |
Sbjct: 87981 a 87981
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 217      tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276
                |||||||| |||||||| ||||||||||||||  |  | ||||||||||| |||| ||||
Sbjct: 12989005 tactacctctccaacctcgaccagaacatcgccatcgttgtgcagaccgtctactacttc 12989064

                 
Query: 277      a 277
                |
Sbjct: 12989065 a 12989065
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 217      tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276
                |||||||| |||||||| ||||||||||||||  |  | ||||||||||| |||| ||||
Sbjct: 12996345 tactacctctccaacctcgaccagaacatcgccatcgttgtgcagaccgtctactacttc 12996404

                 
Query: 277      a 277
                |
Sbjct: 12996405 a 12996405
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>ref|NM_185277.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1401

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 342 gctcgtgcactaccacccgctcgccggccgc 372
           |||||| |||||| |||||||||||||||||
Sbjct: 210 gctcgtccactactacccgctcgccggccgc 240
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>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
             complete sequence
          Length = 145044

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 342   gctcgtgcactaccacccgctcgccggccgc 372
             |||||| |||||| |||||||||||||||||
Sbjct: 86744 gctcgtccactactacccgctcgccggccgc 86774
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>gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, complete sequence
          Length = 196206

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 48     caccaatctctctgccatccata 70
              |||||||||||||||||||||||
Sbjct: 153587 caccaatctctctgccatccata 153565
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 342     gctcgtgcactaccacccgctcgccggccgc 372
               |||||| |||||| |||||||||||||||||
Sbjct: 3209027 gctcgtccactactacccgctcgccggccgc 3209057
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>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
            complete sequence
          Length = 167317

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 342  gctcgtgcactaccacccgctcgccggccgc 372
            |||||| |||||| |||||||||||||||||
Sbjct: 2851 gctcgtccactactacccgctcgccggccgc 2881
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>ref|NM_183628.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1497

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 186 gccggtggaggcgacgccaatagggg 211
           |||||||||||||||| |||||||||
Sbjct: 105 gccggtggaggcgacggcaatagggg 130
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>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0706B05
          Length = 187835

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 186    gccggtggaggcgacgccaatagggg 211
              |||||||||||||||| |||||||||
Sbjct: 167227 gccggtggaggcgacggcaatagggg 167252
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>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster,
             partial and complete cds
          Length = 113234

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 306   cgccgcggacgcgctgcgggccgcgctggc 335
             ||||||||||||| | ||||||||||||||
Sbjct: 41059 cgccgcggacgcggtacgggccgcgctggc 41088
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>ref|XM_429431.1| PREDICTED: Gallus gallus LOC416444 (LOC416444), mRNA
          Length = 872

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 314 acgcgctgcgggccgcgctgg 334
           |||||||||||||||||||||
Sbjct: 162 acgcgctgcgggccgcgctgg 182
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 304    cgcgccgcggacgcgctgcgggccg 328
              |||||||||| ||||||||||||||
Sbjct: 156662 cgcgccgcggccgcgctgcgggccg 156686



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     gacgcgctgcgggccgcgct 332
               ||||||||||||||||||||
Sbjct: 3071122 gacgcgctgcgggccgcgct 3071141
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 307     gccgcggacgcgctgcgggccgcgctggc 335
               ||||||| |||||||| ||||||||||||
Sbjct: 1121237 gccgcggccgcgctgctggccgcgctggc 1121209
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>emb|CR846080.8| Zebrafish DNA sequence from clone DKEY-29P9 in linkage group 3, complete
              sequence
          Length = 242078

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 73     ctcaaagagaccatcaaaatg 93
              |||||||||||||||||||||
Sbjct: 103228 ctcaaagagaccatcaaaatg 103208
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>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster
          Length = 64650

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 313   gacgcgctgcgggccgcgctg 333
             |||||||||||||||||||||
Sbjct: 58924 gacgcgctgcgggccgcgctg 58904
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>ref|NM_184024.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1368

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 346 gtgcactaccacccgctcgccggc 369
           ||||||||| ||||||||||||||
Sbjct: 229 gtgcactactacccgctcgccggc 252
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>gb|AC111064.11| Mus musculus chromosome 1, clone RP23-245H20, complete sequence
          Length = 150336

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    tattctttctctctttaaacccac 50
             ||||||||||| ||||||||||||
Sbjct: 71617 tattctttctcactttaaacccac 71594
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>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216676

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tcctctgtattctttctctc 39
              ||||||||||||||||||||
Sbjct: 148262 tcctctgtattctttctctc 148243
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>gb|AY271660.1| Actinomadura madurae maduropeptin biosynthesis gene cluster, partial
            sequence
          Length = 11426

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  ccgcggacgcgctgcgggcc 327
            ||||||||||||||||||||
Sbjct: 5059 ccgcggacgcgctgcgggcc 5078
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>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     tcaaagagaccatcaaaatg 93
              ||||||||||||||||||||
Sbjct: 172650 tcaaagagaccatcaaaatg 172669
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 285     gtcgggccgcggcaacgaacgcgccgcg 312
               ||||||| ||||||| ||||||||||||
Sbjct: 3228901 gtcgggcagcggcaaggaacgcgccgcg 3228874
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>emb|AL109940.18|HSJ421D16 Human DNA sequence from clone RP3-421D16 on chromosome 6q26-27 Contains
             part of the gene for smooth muscle cell associated protein
             2 (SMAP2) or secreted modular calcium binding protein 2
             (SMOC2) and two CpG islands, complete sequence
          Length = 110603

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gcagaatggcgtggccacca 127
             ||||||||||||||||||||
Sbjct: 86451 gcagaatggcgtggccacca 86432
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>emb|X15540.1|TBPGIG T.brucei pgi gene for glucose-6-phosphate isomerase (EC 5.3.1.9)
          Length = 2070

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  gtattctttctctctttaaa 45
           ||||||||||||||||||||
Sbjct: 169 gtattctttctctctttaaa 150
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>gb|AC158555.6| Mus musculus chromosome 3, clone RP23-14B10, complete sequence
          Length = 208510

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     ctctgtattctttctctctttaaa 45
              |||| |||||||||||||||||||
Sbjct: 118720 ctctatattctttctctctttaaa 118697
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 305     gcgccgcggacgcgctgcgggccg 328
               ||||||||||||||||||| ||||
Sbjct: 4674013 gcgccgcggacgcgctgcgcgccg 4674036
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>gb|AC025173.5|AC025173 Homo sapiens chromosome 5 clone CTD-2036C20, complete sequence
          Length = 140935

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    acttcctctgtattctttct 36
             ||||||||||||||||||||
Sbjct: 83265 acttcctctgtattctttct 83246
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>gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana BAC F17F8 from chromosome I,
             complete sequence
          Length = 102393

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tctctgccatccatactctc 75
             ||||||||||||||||||||
Sbjct: 14929 tctctgccatccatactctc 14948
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>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1051E10
          Length = 207782

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 346    gtgcactaccacccgctcgccggc 369
              ||||||||| ||||||||||||||
Sbjct: 100949 gtgcactactacccgctcgccggc 100972
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>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0463A02
          Length = 151041

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 346   gtgcactaccacccgctcgccggc 369
             ||||||||| ||||||||||||||
Sbjct: 16392 gtgcactactacccgctcgccggc 16415
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>emb|BX649357.5| Mouse DNA sequence from clone RP23-364J19 on chromosome 2, complete
             sequence
          Length = 41488

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ccacttcctctgtattcttt 34
             ||||||||||||||||||||
Sbjct: 26380 ccacttcctctgtattcttt 26361
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>dbj|AK071594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102H06, full
           insert sequence
          Length = 1713

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 346 gtgcactaccacccgctcgccggc 369
           ||||||||| ||||||||||||||
Sbjct: 256 gtgcactactacccgctcgccggc 279
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 324     ggccgcgctggctcgcgtgc 343
               ||||||||||||||||||||
Sbjct: 2444209 ggccgcgctggctcgcgtgc 2444190
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>gb|AF108814.1|AF108814 Petromyzon marinus homeobox protein SIX4 (Six4) mRNA, partial cds
          Length = 191

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 agaccgtgtactgcttcaag 279
           ||||||||||||||||||||
Sbjct: 38  agaccgtgtactgcttcaag 57
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     gacgcgctgcgggccgcgct 332
               ||||||||||||||||||||
Sbjct: 1460343 gacgcgctgcgggccgcgct 1460362
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 294     cggcaacgaacgcgccgcggacgcgctgcggg 325
               |||| |||||||||||| | ||||||||||||
Sbjct: 1104418 cggcgacgaacgcgccgtgcacgcgctgcggg 1104449
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>emb|CR854964.10| Zebrafish DNA sequence from clone DKEY-58J19 in linkage group 1, complete
              sequence
          Length = 180969

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    taaggcgcagctgatgtcgg 157
              ||||||||||||||||||||
Sbjct: 172749 taaggcgcagctgatgtcgg 172768
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>gb|AC159709.8| Mus musculus 10 BAC RP23-136O17 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 202716

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    tcctctgtattctttctctc 39
             ||||||||||||||||||||
Sbjct: 56792 tcctctgtattctttctctc 56773


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,903,959
Number of Sequences: 3902068
Number of extensions: 2903959
Number of successful extensions: 75577
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74529
Number of HSP's gapped (non-prelim): 1045
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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