ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet52b10 |
|---|---|
| Clone Library Name | barley_pub |
>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Protein Xantha-l) Length = 417 Score = 146 bits (369), Expect = 1e-35 Identities = 77/111 (69%), Positives = 77/111 (69%) Frame = +1 Query: 46 MASAMELSLLNPAMHHYGIAAKTASHLPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 225 MASAMELSLLNPAMHHYGIAAKTASHLPVVP Sbjct: 1 MASAMELSLLNPAMHHYGIAAKTASHLPVVPARRASSGAVRFRVRAAAAAPPAPAAKPGS 60 Query: 226 XXXXXKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK Sbjct: 61 PKKRGKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 111
>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 82.4 bits (202), Expect = 2e-16 Identities = 38/46 (82%), Positives = 42/46 (91%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K E+NE+LLTPRFYTTDFDEME LFN EINK+LNQ EF+ALLQEFK Sbjct: 54 KKEINETLLTPRFYTTDFDEMETLFNTEINKKLNQSEFEALLQEFK 99
>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Copper response defect 1 protein) (Dicarboxylate diiron protein) (AtZIP Length = 409 Score = 79.7 bits (195), Expect = 2e-15 Identities = 37/46 (80%), Positives = 41/46 (89%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K E+ ESLLTPRFYTTDF+EMEQLFN EINK LN+ EF+ALLQEFK Sbjct: 58 KKEIQESLLTPRFYTTDFEEMEQLFNTEINKNLNEAEFEALLQEFK 103
>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 78.6 bits (192), Expect = 3e-15 Identities = 36/46 (78%), Positives = 40/46 (86%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 KT + E+LLTPRFYTTDFDEME LFN EINK LNQ EF++LLQEFK Sbjct: 54 KTAIKETLLTPRFYTTDFDEMEALFNTEINKNLNQSEFESLLQEFK 99
>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) (Copper target homolog 1 protein) Length = 407 Score = 67.4 bits (163), Expect = 8e-12 Identities = 29/46 (63%), Positives = 39/46 (84%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K +E+LLTPRFYTTDFDEME+LF+ E+NK ++ +EF+A+L EFK Sbjct: 56 KVASDETLLTPRFYTTDFDEMERLFSLELNKNMDMEEFEAMLNEFK 101
>CRD1_CHLRE (Q9LD46) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) (Copper response defect 1 protein) (Copper-response target 1 protein Length = 407 Score = 63.5 bits (153), Expect = 1e-10 Identities = 29/46 (63%), Positives = 35/46 (76%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K E+LLTPRFYTTDFDEMEQLF+ EIN L+ +E +A L EF+ Sbjct: 56 KVAAKETLLTPRFYTTDFDEMEQLFSKEINPNLDMEELNACLNEFR 101
>ACSF_GRATL (Q6B8U1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 53.9 bits (128), Expect = 9e-08 Identities = 28/46 (60%), Positives = 34/46 (73%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 +T V E+LLTPRFYTTDFDEM +L + N DEF+ALLQEF+ Sbjct: 9 QTPVKETLLTPRFYTTDFDEMSKL-----DISSNIDEFEALLQEFR 49
>ACSF1_SYNY3 (P72584) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 358 Score = 49.3 bits (116), Expect = 2e-06 Identities = 24/46 (52%), Positives = 33/46 (71%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 KT E++LTPRFYTTDFDEM A+++ N+DE A+L+EF+ Sbjct: 18 KTPAKETILTPRFYTTDFDEM-----AKMDISPNEDELRAILEEFR 58
>ACSF3_ANASP (Q8YRZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 3 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 3) Length = 358 Score = 48.5 bits (114), Expect = 4e-06 Identities = 24/46 (52%), Positives = 32/46 (69%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K E+LLTPRFYTTDFDEM A ++ +N+DE A+L+EF+ Sbjct: 18 KVPAKETLLTPRFYTTDFDEM-----ARMDISVNEDELLAILEEFR 58
>ACSF_PORPU (P51277) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 45.1 bits (105), Expect = 4e-05 Identities = 22/41 (53%), Positives = 30/41 (73%) Frame = +1 Query: 256 ESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 E+LLTPRFYTTDF+EM A +N N+ +F A+L+EF+ Sbjct: 14 ETLLTPRFYTTDFEEM-----ASMNISENEQDFFAILEEFR 49
>ACSF_SYNP6 (Q5MZZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 43.9 bits (102), Expect = 1e-04 Identities = 21/46 (45%), Positives = 31/46 (67%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K E++LTPRFYTTDF+ M A+++ N+DE A+L+EF+ Sbjct: 18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFR 58
>ACSF_SYNPX (Q7U6Y8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 356 Score = 42.7 bits (99), Expect = 2e-04 Identities = 20/46 (43%), Positives = 32/46 (69%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K V +++LTPRFYTTDFD+M A ++ + N+ E +A+ +EF+ Sbjct: 16 KDPVKDTILTPRFYTTDFDDM-----AAMDLRPNEAELEAICEEFR 56
>ACSF_PROMP (Q7V1M1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 390 Score = 42.0 bits (97), Expect = 4e-04 Identities = 18/46 (39%), Positives = 31/46 (67%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K +++LTP FYTTDF+ ME++ + +N+DE +A+ +EF+ Sbjct: 18 KDIAKDTILTPNFYTTDFEAMEKM-----DLSINEDELEAICEEFR 58
>ACSF1_SYNEL (Q8DJ05) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 380 Score = 41.2 bits (95), Expect = 6e-04 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K E++LTPRFYTTDF+ M + E N+ E +A+L+EF+ Sbjct: 18 KAPAKETILTPRFYTTDFEAMANMDITE-----NKAELEAILEEFR 58
>ACSF2_SYNY3 (P74134) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 41.2 bits (95), Expect = 6e-04 Identities = 21/46 (45%), Positives = 29/46 (63%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K V E+LLTPRFYTTDFD++ A + L +E +A L+E + Sbjct: 18 KAPVKETLLTPRFYTTDFDKV-----ANLVLTLQDEEIEAALEELR 58
>ACSF2_ANASP (Q8YVU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 40.4 bits (93), Expect = 0.001 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K V E+LLTPRFYTTDFD + A ++ N+ E A+++E + Sbjct: 18 KAPVQETLLTPRFYTTDFDAV-----ANLDISANETEIRAIVEELR 58
>ACSF_GLOVI (Q7NFA1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 346 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/46 (43%), Positives = 32/46 (69%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 ++E E+LLTPRFYTTDF+ + A+++ + +F+ALL EF+ Sbjct: 13 QSERRETLLTPRFYTTDFEAL-----AKLDISAMEADFEALLAEFQ 53
>ACSF_CYAME (Q85FX6) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 335 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/41 (46%), Positives = 29/41 (70%) Frame = +1 Query: 256 ESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 ++LLTPRFYTTDFD+M A+ + N+ E +A++ EF+ Sbjct: 12 QTLLTPRFYTTDFDQM-----AKYDISKNRAEIEAIVNEFR 47
>ACSF_CYACA (Q9TLR8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 354 Score = 39.7 bits (91), Expect = 0.002 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 K + E+LL PRFYTTDFDE+ + + N +E +A++ EF+ Sbjct: 11 KKTIKETLLAPRFYTTDFDEI-----SRYDISSNFEEIEAIVNEFR 51
>ACSF2_SYNEL (Q8DI68) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 354 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/43 (41%), Positives = 32/43 (74%) Frame = +1 Query: 250 VNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 + E+LLTPRFYTTDF++ +L ++++Q Q++ +A+L E + Sbjct: 17 IRENLLTPRFYTTDFEQAAKL---DLSRQ--QEQLEAMLAEMR 54
>ACSF1_ANASP (Q8YX57) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 351 Score = 36.2 bits (82), Expect = 0.020 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 KT E++LTPRFYTTDF+ A ++ ++E A+L E + Sbjct: 11 KTPSKETVLTPRFYTTDFETA-----ANLDLSAQENELQAMLAEMR 51
>ACSF_PROMA (Q7VBV0) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 347 Score = 34.7 bits (78), Expect = 0.058 Identities = 15/43 (34%), Positives = 31/43 (72%) Frame = +1 Query: 250 VNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 ++E+LLTPRFYTT+F++ A+ + ++ + +F+A+ +E + Sbjct: 21 LDENLLTPRFYTTEFEKA-----AKTDLEIARKDFEAMFKEME 58
>ACSF_PROMM (Q7V3Y9) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 34.3 bits (77), Expect = 0.075 Identities = 15/43 (34%), Positives = 30/43 (69%) Frame = +1 Query: 250 VNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 ++++LLTPRFYTT+FD+ A+ + + + +F+A+ +E + Sbjct: 23 LDDNLLTPRFYTTEFDKA-----AKTDLDIARKDFEAMFKEME 60
>ACSF_RHOPA (Q6N9J7) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 365 Score = 31.6 bits (70), Expect = 0.49 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +1 Query: 256 ESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 +++LTPRFYTTD+ M++L + L + E+ A++ E + Sbjct: 31 DTILTPRFYTTDYAAMDKL-----DVSLVRAEWTAMMNELR 66
>ACSF_RHOGE (Q8VPB5) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 31.2 bits (69), Expect = 0.64 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = +1 Query: 259 SLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFK 378 +LL+PRFYTTD+ M + + I + E+DA+L E++ Sbjct: 21 TLLSPRFYTTDYAAMNAIDVSSI-----RAEWDAMLAEYE 55
>UB2Q1_MOUSE (Q7TSS2) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) Length = 422 Score = 30.8 bits (68), Expect = 0.83 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -2 Query: 174 AEADGAGRGPACGDNREVGGRLGGDAVVVHCGVEE 70 A A GAG G A G + G + GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPSRGSVPGDPVRIHCNITE 110
>UB2Q1_HUMAN (Q7Z7E8) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) (Protein NICE-5) Length = 422 Score = 30.8 bits (68), Expect = 0.83 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -2 Query: 174 AEADGAGRGPACGDNREVGGRLGGDAVVVHCGVEE 70 A A GAG G A G + G + GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPPRGSVPGDPVRIHCNITE 110
>JJAZ_MOUSE (Q80U70) Polycomb protein Suz12 (Suppressor of zeste 12 protein| homolog) Length = 741 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = -2 Query: 177 HAEADGAGRGPACGDNREVGGRLGGDAVVVHCGVEEGELHGG 52 H G G GP+ G GG GG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAAVAAAASGGKSGGG 44
>FGD4_HUMAN (Q96M96) FYVE, RhoGEF and PH domain-containing protein 4 (Actin| filament-binding protein frabin) (FGD1-related F-actin-binding protein) (Zinc finger FYVE domain-containing protein 6) Length = 766 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 253 NESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDA 360 NE LLT R Y D ++Q+F ++ ++ N+ F A Sbjct: 212 NELLLTERAYVNRLDLLDQVFYCKLLEEANRGSFPA 247
>GATE_PYRAE (Q8ZTJ3) Glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.-)| (Glu-ADT subunit E) Length = 608 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -2 Query: 156 GRGPACGDNREVGGRLGGDAVVVHCGVEEGEL 61 G G + REV RLG ++ ++ GVEE EL Sbjct: 351 GYGITAEEVREVANRLGVESFILLMGVEESEL 382
>CSMD1_MOUSE (Q923L3) CUB and sushi domain-containing protein 1 precursor (CUB and| sushi multiple domains protein 1) Length = 3564 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 2/82 (2%) Frame = -3 Query: 275 RGVSRDSLTSVLPRFFGEPGFXXXXXXXXXXALTRKRTAPEEARRAGT--TGRWEAVLAA 102 RGV + + LP F G+PG P E R +G T + E + Sbjct: 3140 RGVWKGEVPQCLPVFCGDPG------------------TPAEGRLSGKSFTFKSEVFIQC 3181 Query: 101 MP*WCIAGLRRESSMADAIFRG 36 P + + G R + AD I+ G Sbjct: 3182 KPPFVLVGSSRRTCQADGIWSG 3203
>SUZ12_HUMAN (Q15022) Polycomb protein SUZ12 (Suppressor of zeste 12 protein| homolog) (Joined to JAZF1 protein) (Chromatin precipitated E2F target 9 protein) (ChET 9 protein) Length = 739 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = -2 Query: 177 HAEADGAGRGPACGDNREVGGRLGGDAVVVHCGVEEGELHGG 52 H G G GP+ G GG GG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAVAAATASGGKSGGG 44
>PRC_HAEIN (P45306) Tail-specific protease precursor (EC 3.4.21.102) (Protease| Re) (C-terminal-processing peptidase) Length = 695 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +1 Query: 277 FYTTDFDEMEQLFNAEINKQLNQDEFDA 360 F +D DE+ Q + ++++QLNQ + A Sbjct: 92 FLQSDIDELRQKYGTKLDEQLNQGDLSA 119
>NORM_RHILO (Q98D15) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/53 (28%), Positives = 23/53 (43%) Frame = -3 Query: 242 LPRFFGEPGFXXXXXXXXXXALTRKRTAPEEARRAGTTGRWEAVLAAMP*WCI 84 +P FG G L R+R + + RR G W A+L ++P W + Sbjct: 67 MPLIFGL-GLMLATSPMIATELGRRRYSVRDLRRTVRQGLWLAILISIPIWIV 118
>CF1A_DROME (P16241) POU-domain protein CF1A (Chorion factor 1A) (CF1-A)| (Ventral veins lacking protein) (Drifter protein) Length = 427 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +1 Query: 28 THAPRKMASAMELSLLNPAMHHYGIAAKTASH-LPVVP 138 T +PR A A E+ + HH+ AA A H LP P Sbjct: 25 TSSPRSAADAGEMKYMQHHHHHHAAAAAAAHHQLPSSP 62
>FANCJ_CHICK (Q3YK19) Fanconi anemia group J protein homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase BRIP1) (Protein FACJ) Length = 1252 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 4/25 (16%) Frame = +3 Query: 3 SLPFRAVCHSRSSED----GVRHGA 65 SLP R VCHSRS G HGA Sbjct: 87 SLPCRCVCHSRSESSEATAGASHGA 111
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Frame = -2 Query: 165 DGAGRGPACGDNREVGGR-----LGGDAVVVH--CGVEEGELHGGRHLPRSVSDRQRG 13 D AG G + +R+ G R GG A H GE HG RH + S R G Sbjct: 3260 DRAGHGHSADRSRQSGTRHAETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSG 3317 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.129 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,122,682 Number of Sequences: 219361 Number of extensions: 481905 Number of successful extensions: 2039 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 1936 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2032 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
