ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet52b03 |
|---|---|
| Clone Library Name | barley_pub |
>OPGH_NITEU (Q82SA8) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 867 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +3 Query: 33 TAMANHLKRPLVQQFFLLTSVAAIVAGPAEPHLSYKIHQHSPSYPQ 170 T + ++L PL F L++ +V EPH + HQ P +PQ Sbjct: 516 TGVMSYLSAPLWFMFLALSTALQVVHAFTEPHYFLQPHQLFPVWPQ 561
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +2 Query: 191 AALPCILRHPAIQEHHHLRPQKRNQHLDRPRH 286 AALP HP HHH P + + H P H Sbjct: 999 AALPPAHHHPPHHHHHHAPPPQPHHHHAHPPH 1030
>K502_ACTCH (P43394) Fruit protein PKIWI502| Length = 317 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +2 Query: 107 SRPR*ATPVL*DTPAFSLVPTAT*LPKRAALPCILRHPAIQEHHHLR 247 SRP + P L P+ +L + + P LRHP ++ HHH R Sbjct: 6 SRPSLSRPSLSRHPSLTLHSSLSHAPPHHRPVAFLRHPTLRYHHHGR 52
>ZNF92_HUMAN (Q03936) Zinc finger protein 92 (Zinc finger protein HTF12)| Length = 586 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +3 Query: 255 NVTSTWTGHDICATT--SYLGFNCGAPHGQASNLTVTSVIFDG 377 N +S +T H I T SY CG Q+SNLT +I+ G Sbjct: 491 NQSSIFTKHKIIHTEGKSYKCEKCGNAFNQSSNLTARKIIYTG 533
>PGLR2_JUNAS (Q9FY19) Polygalacturonase precursor (PG) (EC 3.2.1.15) (Pectinase)| (Major pollen allergen Jun a 2) Length = 507 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/39 (25%), Positives = 21/39 (53%) Frame = +3 Query: 111 GPAEPHLSYKIHQHSPSYPQPRDFPSEQLYHAYFAIQRF 227 GP +PH S+K+ +YP P + + +++ + + F Sbjct: 111 GPCQPHFSFKVDGTIAAYPDPAKWKNSKIWMHFARLTDF 149
>PTPA2_YEAST (Q12461) Serine/threonine-protein phosphatase 2A activator 2 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2) (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl phosphatase activator 2) Length = 358 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -3 Query: 181 KSRGCGYEGECWCIL*DRCGSAGPATIAATEVSRKN 74 K C +EG D CG P+ IAATE+++K+ Sbjct: 316 KDDECNFEGHVHTTWGDCCGIKLPSAIAATEMNKKH 351
>CHRA_PSEAE (P14285) Chromate transport protein| Length = 416 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = -3 Query: 391 EHRPKPSKMTDVTVRLLACPCGAPQLKPR*LVVAQMSWPVQVLVTFLGSEVMVFLNRWMA 212 E +PSK TD T + P PQL R L ++W V + +V RW++ Sbjct: 6 EESYRPSKATDATTEAVPPPMSYPQLFARFLKFGLLAWGGPVAQIDMLRRELVDEERWIS 65
>3MGH_STAAW (P65416) Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)| Length = 202 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = +3 Query: 252 KNVTSTWTGHDICATTSYLGFNCGAPHGQASNLT--VTSV 365 ++ T T+TG+ I T +YLG N A HG +T VTS+ Sbjct: 23 QDTTQTYTGY-IVETEAYLGLNDRAAHGYGGKITPKVTSL 61
>3MGH_STAAS (Q6G6X6) Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)| Length = 202 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = +3 Query: 252 KNVTSTWTGHDICATTSYLGFNCGAPHGQASNLT--VTSV 365 ++ T T+TG+ I T +YLG N A HG +T VTS+ Sbjct: 23 QDTTQTYTGY-IVETEAYLGLNDRAAHGYGGKITPKVTSL 61
>3MGH_STAAR (Q6GE90) Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)| Length = 202 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = +3 Query: 252 KNVTSTWTGHDICATTSYLGFNCGAPHGQASNLT--VTSV 365 ++ T T+TG+ I T +YLG N A HG +T VTS+ Sbjct: 23 QDTTQTYTGY-IVETEAYLGLNDRAAHGYGGKITPKVTSL 61
>3MGH_STAAN (P65415) Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)| Length = 202 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = +3 Query: 252 KNVTSTWTGHDICATTSYLGFNCGAPHGQASNLT--VTSV 365 ++ T T+TG+ I T +YLG N A HG +T VTS+ Sbjct: 23 QDTTQTYTGY-IVETEAYLGLNDRAAHGYGGKITPKVTSL 61
>3MGH_STAAM (P65414) Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)| Length = 202 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = +3 Query: 252 KNVTSTWTGHDICATTSYLGFNCGAPHGQASNLT--VTSV 365 ++ T T+TG+ I T +YLG N A HG +T VTS+ Sbjct: 23 QDTTQTYTGY-IVETEAYLGLNDRAAHGYGGKITPKVTSL 61
>3MGH_STAAC (Q5HDL2) Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)| Length = 202 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = +3 Query: 252 KNVTSTWTGHDICATTSYLGFNCGAPHGQASNLT--VTSV 365 ++ T T+TG+ I T +YLG N A HG +T VTS+ Sbjct: 23 QDTTQTYTGY-IVETEAYLGLNDRAAHGYGGKITPKVTSL 61
>CUT_DROME (P10180) Homeobox protein cut| Length = 2175 Score = 23.9 bits (50), Expect(2) = 5.9 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = +1 Query: 358 HQSFSMALVCVHRCNKILSTSFPILHSSRLPPTTSAA 468 HQ+ + A H+ + S P H+ LPP+ A Sbjct: 1528 HQAAAAAAALHHQSMLLTSPGLPPQHAISLPPSAGGA 1564 Score = 23.5 bits (49), Expect(2) = 5.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +2 Query: 221 AIQEHHHLRPQKRNQHLDRPRHLRHDELPRLQ 316 A Q HL+ Q+ QHL + +HL + P Q Sbjct: 1496 AQQAQQHLQ-QQAQQHLQQQQHLAQQQHPHQQ 1526
>YRPE_BACSU (O05410) Hypothetical protein yrpE| Length = 251 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +3 Query: 144 HQHSPSYPQPRDFPSEQLYHAYFAIQRFKNTITSD 248 H+HS + D +E++Y YF + K+ + SD Sbjct: 59 HEHSHDHSHAHDEETEKIYEGYFKNSQVKDRLLSD 93
>VTS1_EMENI (Q5BGC4) Protein vts1| Length = 611 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = +3 Query: 249 PKNVTSTWTGHDICATTSYLGFNCGAPHGQASNLTVTS 362 P NV ++W T+ G GAPH Q S++ + Sbjct: 332 PYNVNASWASMTNTPMTATFGSQLGAPHQQGSDMVANA 369
>DZIP1_MOUSE (Q8BMD2) Zinc finger protein DZIP1 (DAZ-interacting protein 1| homolog) Length = 852 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 4/77 (5%) Frame = +3 Query: 48 HLKRPLVQQFFLLT---SVAAIVAGPAEPHLSYKIHQ-HSPSYPQPRDFPSEQLYHAYFA 215 H RPLV+Q + T SV + E H + +P + + E L HAY + Sbjct: 621 HKSRPLVRQRTVFTDKVSVPKLKKNTKESHFLRRFPSTKTPPFSSEEEPDEEDLLHAYLS 680 Query: 216 IQRFKNTITSDPKNVTS 266 T PK+ S Sbjct: 681 PDSLATAATQPPKSSMS 697
>CTXA_CHIQU (P58762) Toxin A precursor (CqTX-A)| Length = 462 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = +3 Query: 162 YPQPRDFPSEQLYHAYFAIQ-----RFKNTITSDPKNVTSTWTGHDICATTSYLGFNCGA 326 YP+ R+ S++++ + ++ R K +T + W + +C++ YL C Sbjct: 293 YPRERNEQSQKIFKFFDLMKVKYDDRLKQDLTGIQVFSSLHWPNYFLCSSKDYLALICTK 352 Query: 327 PHG 335 P+G Sbjct: 353 PYG 355
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 28.5 bits (62), Expect = 8.9 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = +3 Query: 243 SDPKNVTSTWTGHDICATTSYLGFNCGAPHGQASNLTVTSVIFDGFGLCSPMQQDLVDEL 422 SDP S+W+ ++ +LG +C A SN V SV F L P ++ L Sbjct: 36 SDPAQSLSSWSDNNDVTPCKWLGVSCDA----TSN--VVSVDLSSFMLVGPF-PSILCHL 88 Query: 423 PDLALFQASSNNFGG 467 P L +N+ G Sbjct: 89 PSLHSLSLYNNSING 103 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,354,344 Number of Sequences: 219361 Number of extensions: 1325457 Number of successful extensions: 4035 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3855 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4028 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
