ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet52a09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 720 bits (363), Expect = 0.0 Identities = 379/383 (98%), Gaps = 1/383 (0%) Strand = Plus / Plus Query: 21 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 60 Query: 81 ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 120 Query: 141 aaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 180 Query: 201 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 240 Query: 261 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaacc 319 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 300 Query: 320 gcctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggg 379 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 301 gcctactacctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctggga 360 Query: 380 cacgtcaccggcgagccctacac 402 |||||||||||||||||||||| Sbjct: 361 aacgtcaccggcgagccctacac 383
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 335 bits (169), Expect = 7e-89 Identities = 302/342 (88%), Gaps = 7/342 (2%) Strand = Plus / Plus Query: 68 catggctcgcatgggggcgtcggtgctttcgatcctgctcgcctcttgcgccct---ggc 124 |||||||||||||| || ||||||||| |||||||||| || ||||| ||| | ||| Sbjct: 123 catggctcgcatggcggtgtcggtgctggcgatcctgctggcgtcttgtgccgttgcggc 182 Query: 125 ggcggcgagcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcct 184 |||||||||||||||||||||||||||| | || ||||| ||||| || || |||||||| Sbjct: 183 ggcggcgagcttcgacaaggagttcgacatcacgtggggcgacggccgtggaaagatcct 242 Query: 185 caacaacggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtc 244 |||||| || ||||||||||| ||||| ||||||||| |||||| |||||||||||||| Sbjct: 243 caacaatgggcagctcctgaccctggggctggacaagacctccgggtccgggttccagtc 302 Query: 245 caagcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtc-cccggcaact 303 ||||| |||||||||||||||||||||||||||||| |||||||||||| || ||||||| Sbjct: 303 caagcgcgagtacctcttcggcaagatcgacatgcaactcaagctcgtcgccgggcaact 362 Query: 304 --cgccggcaccgtaaccgcctactacctgtcg-tcgcaggggccgacgcacgacgagat 360 |||||||||||| |||||||||||||||||| ||| |||| ||||||||||| |||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgttcgatgggggcgacgcacgacaagat 422 Query: 361 cgacttcgagttcctggggcacgtcaccggcgagccctacac 402 |||||||||||||||||| ||||||| |||||||||||||| Sbjct: 423 cgacttcgagttcctgggcaacgtcacgggcgagccctacac 464
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 266 bits (134), Expect = 5e-68 Identities = 231/262 (88%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 142 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 201 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 196 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 255 Query: 202 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 261 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 256 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 315 Query: 262 tcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccg 320 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 316 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 375 Query: 321 cctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggc 380 |||||||| |||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 376 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 435 Query: 381 acgtcaccggcgagccctacac 402 | || ||||| ||||| ||||| Sbjct: 436 atgtgaccggggagccgtacac 457
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 266 bits (134), Expect = 5e-68 Identities = 231/262 (88%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 142 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 201 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 186 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 245 Query: 202 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 261 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 246 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 305 Query: 262 tcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccg 320 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 306 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 Query: 321 cctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggc 380 |||||||| |||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 366 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 425 Query: 381 acgtcaccggcgagccctacac 402 | || ||||| ||||| ||||| Sbjct: 426 atgtgaccggggagccgtacac 447
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 254 bits (128), Expect = 2e-64 Identities = 168/180 (93%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 265 ctccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 324 Query: 284 caagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||| Sbjct: 325 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 384 Query: 343 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 | || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 385 gacggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 444
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 246 bits (124), Expect = 5e-62 Identities = 167/180 (92%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| | Sbjct: 159 ctccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagat 218 Query: 284 caagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||| Sbjct: 219 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 278 Query: 343 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 | || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 279 gacggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 338
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 222 bits (112), Expect = 7e-55 Identities = 164/180 (91%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 284 caagctcgtccccggcaact-cgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 |||||||||||||||||||| |||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380 Query: 343 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 |||| ||||| |||||||||||||||||||||||| |||| ||||||||||| ||||| Sbjct: 381 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 440
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 222 bits (112), Expect = 7e-55 Identities = 164/180 (91%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 284 caagctcgtccccggcaact-cgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 |||||||||||||||||||| |||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380 Query: 343 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 |||| ||||| |||||||||||||||||||||||| |||| ||||||||||| ||||| Sbjct: 381 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 440
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 214 bits (108), Expect = 2e-52 Identities = 163/180 (90%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 153 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 212 Query: 284 caagctcgtccccggcaact-cgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 |||| ||||||||||||||| |||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 213 caagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 272 Query: 343 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 |||| ||||| |||||||||||||||||||||||| |||| ||||||||||| ||||| Sbjct: 273 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 332
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 210 bits (106), Expect = 3e-51 Identities = 214/246 (86%), Gaps = 3/246 (1%) Strand = Plus / Plus Query: 159 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 218 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 194 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 253 Query: 219 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 277 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 254 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 312 Query: 278 gcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtc 336 |||| |||||||||||||||||||||| ||||||||||| || ||| |||||||||||| Sbjct: 313 gcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtcgtc 372 Query: 337 gcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 ||||||| || ||||||||||||||||||||||||||||||| ||| | ||||||||| Sbjct: 373 gcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggcgagcc 432 Query: 397 ctacac 402 ||||| Sbjct: 433 gtacac 438
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 190 bits (96), Expect = 2e-45 Identities = 162/180 (90%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 225 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 284 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 309 tccggctccgggttccagtcccggcacgagtacctgttcggcaagatcgacatgcagctg 368 Query: 285 aagctcgtccccggcaact-cgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 342 ||| || || ||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 369 cggctggtgccgggcaactccgccggcaccgtcaccgcctactacctgtcgtcgcagggc 428 Query: 343 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 | || ||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 429 ggcg-cgcacgacgagatcgacttcgagttcctgggcaacgtgtccggcgagccctacac 487
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 182 bits (92), Expect = 6e-43 Identities = 165/188 (87%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 142 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 201 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 28774036 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 28773977 Query: 202 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 261 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 28773976 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 28773917 Query: 262 tcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccg 320 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 28773916 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 28773857 Query: 321 cctactac 328 |||||||| Sbjct: 28773856 cctactac 28773849 Score = 139 bits (70), Expect = 8e-30 Identities = 98/106 (92%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 28749713 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 28749772 Query: 284 caagctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 28749773 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 133 bits (67), Expect = 5e-28 Identities = 139/159 (87%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 159 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 218 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 28761428 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 28761487 Query: 219 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 277 ||||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 28761488 -aggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 28761546 Query: 278 gcagctcaagctcgtccccggcaact-cgccggcaccgt 315 |||| ||||||||||||||||||||| |||||||||||| Sbjct: 28761547 gcagatcaagctcgtccccggcaactccgccggcaccgt 28761585 Score = 89.7 bits (45), Expect = 6e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 389 |||||||||||||||||||||| || |||||||||||||||||||||||| | || |||| Sbjct: 28773772 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 28773713 Query: 390 gcgagccctacac 402 | ||||| ||||| Sbjct: 28773712 gggagccgtacac 28773700 Score = 89.7 bits (45), Expect = 6e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 389 ||||||||||||| |||| ||||| |||||||||||||||||||||||| |||| |||| Sbjct: 28749954 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 28750013 Query: 390 gcgagccctacac 402 ||||||| ||||| Sbjct: 28750014 gcgagccgtacac 28750026 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcacc 388 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||| | | Sbjct: 28761689 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 28761748 Query: 389 ggcgagccctacac 402 |||||||| ||||| Sbjct: 28761749 ggcgagccgtacac 28761762 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||||||||||||||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctggg 13230430 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||||||||| | ||||||||||||||||| |||| | ||||||||| Sbjct: 28754713 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagcc 28754760
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 182 bits (92), Expect = 6e-43 Identities = 165/188 (87%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 142 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 201 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 81811 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 81752 Query: 202 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 261 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 81751 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 81692 Query: 262 tcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccg 320 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 81691 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 81632 Query: 321 cctactac 328 |||||||| Sbjct: 81631 cctactac 81624 Score = 139 bits (70), Expect = 8e-30 Identities = 98/106 (92%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 57488 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 57547 Query: 284 caagctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 57548 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 133 bits (67), Expect = 5e-28 Identities = 139/159 (87%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 159 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 218 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 69203 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 69262 Query: 219 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 277 ||||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 69263 -aggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 69321 Query: 278 gcagctcaagctcgtccccggcaact-cgccggcaccgt 315 |||| ||||||||||||||||||||| |||||||||||| Sbjct: 69322 gcagatcaagctcgtccccggcaactccgccggcaccgt 69360 Score = 89.7 bits (45), Expect = 6e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 389 |||||||||||||||||||||| || |||||||||||||||||||||||| | || |||| Sbjct: 81547 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 81488 Query: 390 gcgagccctacac 402 | ||||| ||||| Sbjct: 81487 gggagccgtacac 81475 Score = 89.7 bits (45), Expect = 6e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 389 ||||||||||||| |||| ||||| |||||||||||||||||||||||| |||| |||| Sbjct: 57729 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 57788 Query: 390 gcgagccctacac 402 ||||||| ||||| Sbjct: 57789 gcgagccgtacac 57801 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcacc 388 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||| | | Sbjct: 69464 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 69523 Query: 389 ggcgagccctacac 402 |||||||| ||||| Sbjct: 69524 ggcgagccgtacac 69537 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||||||||| | ||||||||||||||||| |||| | ||||||||| Sbjct: 62488 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagcc 62535
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 168 bits (85), Expect = 9e-39 Identities = 191/225 (84%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 156 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 215 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 204 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 263 Query: 216 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 275 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 264 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 323 Query: 276 atgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccgcctactacctgtcg 334 |||||||||||||||||||| || ||| |||||||||||| || ||| ||| || ||| Sbjct: 324 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 383 Query: 335 tcgcaggggccgacgcacgacgagatcgacttcgagttcctgggg 379 |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 384 tcgcagggttcgcagcacgacgagatcgacttcgagttcctgggg 428
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 168 bits (85), Expect = 9e-39 Identities = 191/225 (84%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 156 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 215 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 211 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 270 Query: 216 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 275 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 271 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 330 Query: 276 atgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccgcctactacctgtcg 334 |||||||||||||||||||| || ||| |||||||||||| || ||| ||| || ||| Sbjct: 331 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 390 Query: 335 tcgcaggggccgacgcacgacgagatcgacttcgagttcctgggg 379 |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 391 tcgcagggttcgcagcacgacgagatcgacttcgagttcctgggg 435
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 157 bits (79), Expect = 3e-35 Identities = 156/179 (87%), Gaps = 2/179 (1%) Strand = Plus / Plus Query: 225 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 284 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || Sbjct: 292 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 351 Query: 285 aagctcgtccccggcaactcgccggcaccgtaaccgcctactacctgtcgtcgcaggg-g 343 ||||| || || |||||||| ||||| || ||| ||| |||||||||||| ||||| | Sbjct: 352 aagctggtgccaggcaactccgtggcacggtcaccaccttctacctgtcgtcccagggcg 411 Query: 344 ccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 || ||||||||||||||||||||||||||||||| |||| | ||| ||||||||||| Sbjct: 412 acg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 469
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 151 bits (76), Expect = 2e-33 Identities = 224/272 (82%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 132 agcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaac 191 |||||| |||| || |||||| | ||||||||||| || || || |||||||| |||||| Sbjct: 316 agcttcaacaacgatttcgacatcacctggggtgatggccgggggaagatcctaaacaac 375 Query: 192 ggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtccaagcac 251 ||||||||||| | || |||||||| ||||||||| ||||| || || || || Sbjct: 376 ggccagctcctcagcctctccctggacaaaacctccggctcagggtttcaatctaaaaac 435 Query: 252 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactcgcc-ggc 310 |||||||||| ||||| ||||||||||| || ||||||||||||||||||||| | || Sbjct: 436 cagtacctctttggcaacatcgacatgcaactgaagctcgtccccggcaactcggctgga 495 Query: 311 accgtaaccgcctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgag 370 || || |||||||| ||||| || || ||||| || || ||||||||||||||||| ||| Sbjct: 496 acggtcaccgcctattacctatcctcacagggccctacccacgacgagatcgactttgag 555 Query: 371 ttcctggggcacgtcaccggcgagccctacac 402 ||||| ||| ||||| ||||| |||||||||| Sbjct: 556 ttcctcgggaacgtctccggccagccctacac 587
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 145 bits (73), Expect = 1e-31 Identities = 134/153 (87%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 |||||||||||| |||||||||||| |||||||||||| ||||||| |||| |||||| | Sbjct: 322 ctccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagat 381 Query: 284 caagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 |||||| || ||||| ||||| ||||||||||| ||| ||| |||||| ||||| ||||| Sbjct: 382 caagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtcccaggg 441 Query: 343 gccgacgcacgacgagatcgacttcgagttcct 375 || | |||||||||||||||||||||||||| Sbjct: 442 ccccaaccacgacgagatcgacttcgagttcct 474
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 139 bits (70), Expect = 8e-30 Identities = 98/106 (92%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 150279 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 150338 Query: 284 caagctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 150339 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 133 bits (67), Expect = 5e-28 Identities = 139/159 (87%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 159 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 218 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 161994 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 162053 Query: 219 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 277 ||||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 162054 -aggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 162112 Query: 278 gcagctcaagctcgtccccggcaact-cgccggcaccgt 315 |||| ||||||||||||||||||||| |||||||||||| Sbjct: 162113 gcagatcaagctcgtccccggcaactccgccggcaccgt 162151 Score = 89.7 bits (45), Expect = 6e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 389 ||||||||||||| |||| ||||| |||||||||||||||||||||||| |||| |||| Sbjct: 150520 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 150579 Query: 390 gcgagccctacac 402 ||||||| ||||| Sbjct: 150580 gcgagccgtacac 150592 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcacc 388 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||| | | Sbjct: 162255 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 162314 Query: 389 ggcgagccctacac 402 |||||||| ||||| Sbjct: 162315 ggcgagccgtacac 162328 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||||||||| | ||||||||||||||||| |||| | ||||||||| Sbjct: 155279 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagcc 155326
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 135 bits (68), Expect = 1e-28 Identities = 164/192 (85%), Gaps = 3/192 (1%) Strand = Plus / Minus Query: 213 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 272 ||||||| || |||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 936 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 877 Query: 273 gacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctg 331 || |||||| | ||||| || || |||||||| || |||||||| || ||| |||||| Sbjct: 876 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 817 Query: 332 tcgtcgcaggg-gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccgg 390 ||||||||||| | || ||||||||||||||||| | ||||||||||| |||| | || Sbjct: 816 tcgtcgcagggcgacg-cgcacgacgagatcgacctggagttcctgggcaacgtgtcggg 758 Query: 391 cgagccctacac 402 |||||||||||| Sbjct: 757 cgagccctacac 746
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 135 bits (68), Expect = 1e-28 Identities = 164/192 (85%), Gaps = 3/192 (1%) Strand = Plus / Plus Query: 213 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 272 ||||||| || |||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 268 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 327 Query: 273 gacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctg 331 || |||||| | ||||| || || |||||||| || |||||||| || ||| |||||| Sbjct: 328 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 387 Query: 332 tcgtcgcaggg-gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccgg 390 ||||||||||| | || ||||||||||||||||| | ||||||||||| |||| | || Sbjct: 388 tcgtcgcagggcgacg-cgcacgacgagatcgacctggagttcctgggcaacgtgtcggg 446 Query: 391 cgagccctacac 402 |||||||||||| Sbjct: 447 cgagccctacac 458
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 121 bits (61), Expect = 2e-24 Identities = 137/161 (85%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 156 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 215 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 94 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 153 Query: 216 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 275 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 154 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 213 Query: 276 atgcagctcaagctcgtccccggcaact-cgccggcaccgt 315 |||||||||||||||||||| || ||| |||||||||||| Sbjct: 214 atgcagctcaagctcgtcccgggggactccgccggcaccgt 254 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 332 tcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggg 379 ||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 396 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctgggg 443
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 107 bits (54), Expect = 3e-20 Identities = 145/174 (83%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 210 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 269 Query: 284 caagctcgtccccggcaactcgcc-ggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||| | ||||| ||||| || || ||| ||||||| | ||| |||| Sbjct: 270 gaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggg 329 Query: 343 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 330 agatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagcc 383
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 107 bits (54), Expect = 3e-20 Identities = 145/174 (83%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 278 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 337 Query: 284 caagctcgtccccggcaactcgcc-ggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||| | ||||| ||||| || || ||| ||||||| | ||| |||| Sbjct: 338 gaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggg 397 Query: 343 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 398 agatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagcc 451
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 101 bits (51), Expect = 2e-18 Identities = 94/107 (87%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 270 atcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactac 328 |||||||||||| ||||| ||||||| || ||||| ||||||||||| || ||||||||| Sbjct: 311 atcgacatgcagatcaaggtcgtccctggtaactccgccggcaccgtcacagcctactac 370 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcct 375 || || || ||||| |||||||||||||||||||||| |||||||| Sbjct: 371 ctctcctcccagggaacgacgcacgacgagatcgactttgagttcct 417
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 99.6 bits (50), Expect = 7e-18 Identities = 87/98 (88%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 283 tcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtcgcagg 341 ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||| Sbjct: 275 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 334 Query: 342 ggccgacgcacgacgagatcgacttcgagttcctgggg 379 || ||||||||||||||||||||||||||||||| Sbjct: 335 actcggagcacgacgagatcgacttcgagttcctgggg 372
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 99.6 bits (50), Expect = 7e-18 Identities = 87/98 (88%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 283 tcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtcgcagg 341 ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||| Sbjct: 272 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 331 Query: 342 ggccgacgcacgacgagatcgacttcgagttcctgggg 379 || ||||||||||||||||||||||||||||||| Sbjct: 332 actcggagcacgacgagatcgacttcgagttcctgggg 369
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 304 cgccggcaccgtaaccgcctactacctgtcgtcgcaggggccgacgcacgacgagatcga 363 |||||||||||| ||||| |||||| |||| ||||| |||||||| ||||||||||| || Sbjct: 5 cgccggcaccgtgaccgcttactacttgtcttcgcaagggccgactcacgacgagattga 64 Query: 364 cttcgagttcctgggg 379 |||||||||||||||| Sbjct: 65 cttcgagttcctgggg 80
>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full insert sequence Length = 634 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 278 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 251 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatg 305
>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA, complete cds Length = 1089 Score = 83.8 bits (42), Expect = 4e-13 Identities = 103/122 (84%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 216 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 275 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 276 atgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || ||||| || |||||||| |||||||||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 335 tc 336 || Sbjct: 341 tc 342
>gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 1068 Score = 83.8 bits (42), Expect = 4e-13 Identities = 103/122 (84%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 216 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 275 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 276 atgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || ||||| || |||||||| |||||||||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 335 tc 336 || Sbjct: 341 tc 342
>gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotransglycosylase (XTR9) mRNA, complete cds Length = 1100 Score = 83.8 bits (42), Expect = 4e-13 Identities = 103/122 (84%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 216 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 275 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 210 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 269 Query: 276 atgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || ||||| || |||||||| |||||||||||||| ||| Sbjct: 270 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 329 Query: 335 tc 336 || Sbjct: 330 tc 331
>gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 901 Score = 83.8 bits (42), Expect = 4e-13 Identities = 103/122 (84%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 216 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 275 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 169 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 228 Query: 276 atgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || ||||| || |||||||| |||||||||||||| ||| Sbjct: 229 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 288 Query: 335 tc 336 || Sbjct: 289 tc 290
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 75.8 bits (38), Expect = 1e-10 Identities = 84/98 (85%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 283 tcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtcgcagg 341 ||||||||||| |||| |||| |||||||| || ||||||| |||||||||||||||| Sbjct: 324 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 383 Query: 342 ggccgacgcacgacgagatcgacttcgagttcctgggg 379 || ||||||||||||||||||||||||| ||||| Sbjct: 384 actcggagcacgacgagatcgacttcgagttcttgggg 421
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 75.8 bits (38), Expect = 1e-10 Identities = 96/114 (84%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 216 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 275 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 18979 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 19038 Query: 276 atgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactac 328 ||| |||||||||| ||| | || ||||| || |||||||| |||||||||||| Sbjct: 19039 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 19092
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 75.8 bits (38), Expect = 1e-10 Identities = 96/114 (84%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 216 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 275 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 27900 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 27959 Query: 276 atgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactac 328 ||| |||||||||| ||| | || ||||| || |||||||| |||||||||||| Sbjct: 27960 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 28013
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 75.8 bits (38), Expect = 1e-10 Identities = 84/98 (85%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 283 tcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtcgcagg 341 ||||||||||| |||| |||| ||||||||||| ||||||| |||||||||||| ||| Sbjct: 285 tcaagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctgtcgtcacaga 344 Query: 342 ggccgacgcacgacgagatcgacttcgagttcctgggg 379 || ||||||||||||||||||||||||| ||||| Sbjct: 345 actcggagcacgacgagatcgacttcgagttcttgggg 382
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 348 cgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 32715 cgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagcc 32667 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 32995 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 32936 Query: 284 caagctcgtccccggc 299 ||||||||||||||| Sbjct: 32935 gaagctcgtccccggc 32920 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||||| | |||||||| || |||||||||||||||| ||||| Sbjct: 29159 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacac 29211
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 348 cgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 30557007 cgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagcc 30556959 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 224 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 283 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 30557287 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 30557228 Query: 284 caagctcgtccccggc 299 ||||||||||||||| Sbjct: 30557227 gaagctcgtccccggc 30557212 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 32180420 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 32180467 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||||| | |||||||| || |||||||||||||||| ||||| Sbjct: 30553451 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacac 30553503 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccgg 390 ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 30508420 cacgacgagatcgacctggagttcctgggcaacgtcaccgg 30508380
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 69.9 bits (35), Expect = 6e-09 Identities = 81/95 (85%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 285 aagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtcgcagggg 343 ||||||||||| |||||||| || || ||||| ||| | | |||| |||| || || ||| Sbjct: 8 aagctcgtcccgggcaactccgctggtaccgttaccacattctacttgtcttcccaaggg 67 Query: 344 ccgacgcacgacgagatcgacttcgagttcctggg 378 |||| ||||||||||||||||||||||||||||| Sbjct: 68 ccgaatcacgacgagatcgacttcgagttcctggg 102
>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2) mRNA, complete cds Length = 1375 Score = 67.9 bits (34), Expect = 2e-08 Identities = 128/158 (81%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 219 aaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 278 |||| ||| ||||| || ||| |||| | ||||||||| || || || |||||||| ||| Sbjct: 207 aaggcctcgggctcgggcttcgagtctacgcacgagtatctatttggtaagatcgatatg 266 Query: 279 cagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcgtcg 337 ||||||||||| ||||| || || || ||||||||||| || || || || || || || Sbjct: 267 cagctcaagctggtccctggaaattctgccggcaccgttactgcttattatctttcatca 326 Query: 338 caggggccgacgcacgacgagatcgacttcgagttcct 375 || ||||| || || || |||||||||||||||||||| Sbjct: 327 caagggcctacccatgatgagatcgacttcgagttcct 364
>gb|AY098522.1| Ananas comosus xyloglucan endotransglycosylase mRNA, partial cds Length = 742 Score = 65.9 bits (33), Expect = 9e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 311 accgtaaccgcctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgag 370 ||||| ||| ||| |||| |||||||||| ||| ||| ||||||||||||||| |||||| Sbjct: 22 accgtcaccaccttctacttgtcgtcgcaagggtcgatgcacgacgagatcgatttcgag 81 Query: 371 ttcct 375 ||||| Sbjct: 82 ttcct 86
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 76109 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 76156
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 331 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 378
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 335 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 382
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 31596 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 31643
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggg 379 ||||||||||||||||||||||||||||||| Sbjct: 113473 gcacgacgagatcgacttcgagttcctgggg 113503 Score = 46.1 bits (23), Expect = 0.087 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 283 tcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 113311 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggg 379 ||||||||||||||||||||||||||||||| Sbjct: 13092 gcacgacgagatcgacttcgagttcctgggg 13122 Score = 46.1 bits (23), Expect = 0.087 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 283 tcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 12930 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggg 379 ||||||||||||||||||||||||||||||| Sbjct: 19010275 gcacgacgagatcgacttcgagttcctgggg 19010305 Score = 46.1 bits (23), Expect = 0.087 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 283 tcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 19010113 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 308 ggcaccgtaaccgcctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttc 367 |||||||| || |||| |||||||||||||||| || ||||||||||||||||| | Sbjct: 321 ggcaccgtcacggccttctacctgtcgtcgcagaactcggagcacgacgagatcgactcc 380 Query: 368 gagttcctggg 378 ||||||||||| Sbjct: 381 gagttcctggg 391
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggg 379 ||||||||||||||||||||||||||||||| Sbjct: 19168924 gcacgacgagatcgacttcgagttcctgggg 19168954 Score = 46.1 bits (23), Expect = 0.087 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 283 tcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 19168762 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||||||||||||||||||||||| Sbjct: 10359113 gcacgacgagatcgacttcgagttcctggg 10359142 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | ||||||||||||||||| Sbjct: 28642113 gacgcacgacgagctggacttcgagttcctggg 28642145 Score = 48.1 bits (24), Expect = 0.022 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 286 agctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||| | ||||||||||||||||| Sbjct: 1445478 gcacgacgagctggacttcgagttcctggg 1445507 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||| | | |||||||| || ||||||||||| |||| ||||| Sbjct: 15085618 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacac 15085670 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttc 373 ||||||||||||||||| |||||| Sbjct: 10363968 cacgacgagatcgactttgagttc 10363991
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||||||||||||||||||||||| Sbjct: 1535 gcacgacgagatcgacttcgagttcctggg 1564 Score = 48.1 bits (24), Expect = 0.022 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 286 agctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttc 373 ||||||||||||||||| |||||| Sbjct: 6390 cacgacgagatcgactttgagttc 6413
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||||||||||||||||||||||| Sbjct: 124923 gcacgacgagatcgacttcgagttcctggg 124952 Score = 48.1 bits (24), Expect = 0.022 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 286 agctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758
>ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds AT5G57550 (XTR3) mRNA, complete cds Length = 1059 Score = 58.0 bits (29), Expect = 2e-05 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 261 ttcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || |||| |||||| ||||| || Sbjct: 251 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 320 gcctactac 328 ||||||||| Sbjct: 311 gcctactac 319
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||| | ||| | |||||||| ||| |||||||||||||||||||||| Sbjct: 346 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacac 398
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||||| | |||||||| || |||||||||||||||| ||||| Sbjct: 325 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacac 377
>gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, complete cds Length = 855 Score = 58.0 bits (29), Expect = 2e-05 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 261 ttcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || |||| |||||| ||||| || Sbjct: 214 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 273 Query: 320 gcctactac 328 ||||||||| Sbjct: 274 gcctactac 282
>gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, complete cds Length = 1060 Score = 58.0 bits (29), Expect = 2e-05 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 261 ttcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || |||| |||||| ||||| || Sbjct: 251 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 320 gcctactac 328 ||||||||| Sbjct: 311 gcctactac 319
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||| | ||| | |||||||| ||| |||||||||||||||||||||| Sbjct: 8379000 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacac 8378948 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||| |||||||| |||| Sbjct: 8322026 cacgacgagatcgacatcgagttcatggg 8322054
>emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 58.0 bits (29), Expect = 2e-05 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 261 ttcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || |||| |||||| ||||| || Sbjct: 228 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 287 Query: 320 gcctactac 328 ||||||||| Sbjct: 288 gcctactac 296
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||||||||||||||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctggg 147618
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||| | ||| | |||||||| ||| |||||||||||||||||||||| Sbjct: 119109 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacac 119057 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||| |||||||| |||| Sbjct: 62135 cacgacgagatcgacatcgagttcatggg 62163
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 58.0 bits (29), Expect = 2e-05 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 261 ttcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || |||| |||||| ||||| || Sbjct: 37112 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 37053 Query: 320 gcctactac 328 ||||||||| Sbjct: 37052 gcctactac 37044
>gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan transferase (XTR3) gene, complete cds Length = 2703 Score = 58.0 bits (29), Expect = 2e-05 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 261 ttcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || |||| |||||| ||||| || Sbjct: 1331 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 1390 Query: 320 gcctactac 328 ||||||||| Sbjct: 1391 gcctactac 1399
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||||||||||||||||| Sbjct: 643 cacgacgagatcgacttcgagttcctggg 671
>gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR3) mRNA, 3' end, partial cds Length = 1017 Score = 58.0 bits (29), Expect = 2e-05 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 261 ttcggcaagatcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || |||| |||||| ||||| || Sbjct: 193 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 252 Query: 320 gcctactac 328 ||||||||| Sbjct: 253 gcctactac 261
>ref|NM_113277.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT3G23730 mRNA, complete cds Length = 1074 Score = 56.0 bits (28), Expect = 9e-05 Identities = 86/104 (82%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 270 atcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| |||| ||| || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 372 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>gb|AY084449.1| Arabidopsis thaliana clone 10852 mRNA, complete sequence Length = 1076 Score = 56.0 bits (28), Expect = 9e-05 Identities = 86/104 (82%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 270 atcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| |||| ||| || ||||| || ||||||||| Sbjct: 327 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 386 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 372 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 387 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 430
>dbj|AK175805.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A12 Length = 1084 Score = 56.0 bits (28), Expect = 9e-05 Identities = 86/104 (82%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 270 atcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| |||| ||| || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 372 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>dbj|AK175804.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A11 Length = 1084 Score = 56.0 bits (28), Expect = 9e-05 Identities = 86/104 (82%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 270 atcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| |||| ||| || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 372 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence Length = 1380 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||| |||| ||||||||||| Sbjct: 390 gcacaacgagttcgacttcgagttcctgggcaacgtgaccggcgagcc 437
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctggggcacgt 384 ||||||||||||| | |||||||||||||||||| |||| Sbjct: 7311670 gacgcacgacgagctggacttcgagttcctggggaacgt 7311632 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcct 375 ||||||||||||||||||||||| Sbjct: 944218 gacgagatcgacttcgagttcct 944240 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | |||||||||||| |||| Sbjct: 35691476 gacgcacgacgagctggacttcgagttcttggg 35691444
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctggggcacgt 384 ||||||||||||| | |||||||||||||||||| |||| Sbjct: 62926 gacgcacgacgagctggacttcgagttcctggggaacgt 62888
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctggggcacgt 384 ||||||||||||| | |||||||||||||||||| |||| Sbjct: 7309565 gacgcacgacgagctggacttcgagttcctggggaacgt 7309527 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcct 375 ||||||||||||||||||||||| Sbjct: 944216 gacgagatcgacttcgagttcct 944238 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | |||||||||||| |||| Sbjct: 35781549 gacgcacgacgagctggacttcgagttcttggg 35781517
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcct 375 ||||||||||||||||||||||||||| Sbjct: 445 gcacgacgagatcgacttcgagttcct 471
>dbj|AK061284.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G03, full insert sequence Length = 1194 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggggcacgt 384 ||||||||||||| | |||||||||||||||||| |||| Sbjct: 433 gacgcacgacgagctggacttcgagttcctggggaacgt 471
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||| ||||||||||||||||||||| ||| ||||| |||||||||| Sbjct: 424 gacgaaatcgacttcgagttcctggggaacgagaccggacagccctacac 473
>ref|XM_467280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | ||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctggg 508
>ref|XM_506903.1| PREDICTED Oryza sativa (japonica cultivar-group), B1053A04.26-1 mRNA Length = 1395 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | ||||||||||||||||| Sbjct: 478 gacgcacgacgagctggacttcgagttcctggg 510
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||||| | ||||||||||| | || |||||||||||||||| Sbjct: 361 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacac 413
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccgg 390 ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 316 cacgacgagatcgacctggagttcctgggcaacgtcaccgg 356
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccgg 390 ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 141797 cacgacgagatcgacctggagttcctgggcaacgtcaccgg 141757
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||||| | ||||||||||| | || |||||||||||||||| Sbjct: 17438276 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacac 17438328 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 28620405 ggctcgcatgggggcgtcgctgct 28620428 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cgacgagatcgacttcgagttcctgggg 379 ||||||| | |||||||||||||||||| Sbjct: 20676460 cgacgagctggacttcgagttcctgggg 20676487
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||||| | ||||||||||| | || |||||||||||||||| Sbjct: 106500 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacac 106552
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | ||||||||||||||||| Sbjct: 106126 gacgcacgacgagctggacttcgagttcctggg 106158
>dbj|AK105864.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A05, full insert sequence Length = 1368 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | ||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctggg 508
>dbj|AK101915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H14, full insert sequence Length = 1394 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | ||||||||||||||||| Sbjct: 477 gacgcacgacgagctggacttcgagttcctggg 509
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccgg 390 ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 379 cacgacgagatcgacctggagttcctgggcaacgtcaccgg 419
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 48.1 bits (24), Expect = 0.022 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 225 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 284 ||||||||||| ||| |||||||| | |||||||||||||| || || | | | | | Sbjct: 212 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 271 Query: 285 aagctcgtccccggcaact-cgccggcaccgtaaccgcctactacctg 331 ||||||||| |||||||| |||||||||||| ||| ||| ||||||| Sbjct: 272 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 319 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||| |||||||| |||| Sbjct: 341 cacgacgagatcgacatcgagttcatggg 369
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 48.1 bits (24), Expect = 0.022 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 225 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 284 ||||||||||| ||| |||||||| | |||||||||||||| || |||| | || | Sbjct: 221 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttcgaggtcaagatg 280 Query: 285 aagctcgtccccggcaact-cgccggcaccgtaaccgcctactacctg 331 ||||||||| |||||||| ||||||||| || ||| ||| ||||||| Sbjct: 281 aagctcgtcgacggcaactccgccggcacagtcacctccttctacctg 328
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 48.1 bits (24), Expect = 0.022 Identities = 45/52 (86%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctac 400 |||||||||||||||| |||||||| |||| || ||| |||||| |||||| Sbjct: 353 gcacgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctac 404
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcct 375 ||||||||||||||||||||||| Sbjct: 99415 gacgagatcgacttcgagttcct 99437
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 46.1 bits (23), Expect = 0.087 Identities = 44/51 (86%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 399 |||||||||||||||| |||||||| |||| || ||| |||||| ||||| Sbjct: 353 gcacgacgagatcgacatcgagttcatgggcaacctcagcggcgaccccta 403
>dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F24, full insert sequence Length = 1123 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcct 375 ||||||||||||||||||||||| Sbjct: 355 gacgagatcgacttcgagttcct 377
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggg 379 |||||| |||||||||||||||||| ||||| Sbjct: 353 gcacgatgagatcgacttcgagttcttgggg 383
>gb|BT020422.1| Arabidopsis thaliana At4g14130 mRNA, complete cds Length = 870 Score = 44.1 bits (22), Expect = 0.34 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 269 gatcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 328 cctgtc 333 | |||| Sbjct: 276 cttgtc 281
>ref|NM_117490.2| Arabidopsis thaliana XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G14130 (XTR7) mRNA, complete cds Length = 1064 Score = 44.1 bits (22), Expect = 0.34 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 269 gatcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 328 cctgtc 333 | |||| Sbjct: 361 cttgtc 366
>ref|XM_463978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1560 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||| | ||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctggg 665
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 225 tccggctccgggttccagtccaagcacgagtacctcttcggc 266 ||||||||||| ||| | |||||| || |||||||||||||| Sbjct: 229 tccggctccggcttcaaatccaagaacaagtacctcttcggc 270
>gb|AY045865.1| Arabidopsis thaliana putative xyloglucan endotransglycosylase-related protein XTR-7 (At4g14130) mRNA, complete cds Length = 1075 Score = 44.1 bits (22), Expect = 0.34 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 269 gatcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 328 cctgtc 333 | |||| Sbjct: 361 cttgtc 366
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA, complete cds Length = 1268 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggg 379 |||||||||||||| ||||||||| ||||| Sbjct: 370 cacgacgagatcgatttcgagttcttgggg 399
>gb|AY580314.1| Selaginella kraussiana putative xyloglucan endotransglucosylase/hydrolase (XTH1) mRNA, complete cds Length = 849 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcctggg 378 |||||||||||| ||||||||||||| Sbjct: 295 gacgagatcgacctcgagttcctggg 320
>emb|BX841553.1|CNS09YH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 44.1 bits (22), Expect = 0.34 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 269 gatcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 279 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 338 Query: 328 cctgtc 333 | |||| Sbjct: 339 cttgtc 344
>gb|AY087282.1| Arabidopsis thaliana clone 33554 mRNA, complete sequence Length = 1060 Score = 44.1 bits (22), Expect = 0.34 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 269 gatcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 328 cctgtc 333 | |||| Sbjct: 361 cttgtc 366
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||| | ||||||||||||||||| Sbjct: 126750 gcacgacgagctggacttcgagttcctggg 126779
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||| | ||||||||||||||||| Sbjct: 8899 gcacgacgagctggacttcgagttcctggg 8928
>dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H23, full insert sequence Length = 1562 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||| | ||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctggg 665
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase, partial cds Length = 1292 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggg 379 |||||||||||||| ||||||||| ||||| Sbjct: 436 cacgacgagatcgatttcgagttcttgggg 465
>gb|U43489.1|ATU43489 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR7) mRNA, complete cds Length = 979 Score = 44.1 bits (22), Expect = 0.34 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 269 gatcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 328 cctgtc 333 | |||| Sbjct: 276 cttgtc 281
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 44.1 bits (22), Expect = 0.34 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 276 atgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctactacctgtcg 334 ||||||||||||||||| |||||||||| || ||||| || || || |||||| |||| Sbjct: 261 atgcagctcaagctcgttgccggcaactctgctggcactgtcactgcttactacttgtca 320 Query: 335 tcgcaggggccgacgcacgacgagatcgacttcgagtt 372 || || ||||| || || || ||||| || |||||||| Sbjct: 321 tcccaagggccaacacatgatgagattgatttcgagtt 358
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||| |||||||| |||| Sbjct: 353 cacgacgagatcgacatcgagttcatggg 381
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||| |||||||| |||| Sbjct: 358 cacgacgagatcgacatcgagttcatggg 386
>ref|XM_465430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 862 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||| | | |||||||| || ||||||||||| |||| ||||| Sbjct: 406 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacac 458
>ref|XM_470453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | |||||||||||| |||| Sbjct: 456 gacgcacgacgagctggacttcgagttcttggg 488
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | |||||||||||| |||| Sbjct: 89254 gacgcacgacgagctggacttcgagttcttggg 89222
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 gctccgggttccagtccaagcacga 253 ||||||||||||||||| ||||||| Sbjct: 90144 gctccgggttccagtcccagcacga 90120
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 263 cggcaagatcgacatgcagctcaag 287 ||||||||||||||||||| ||||| Sbjct: 511026 cggcaagatcgacatgcagatcaag 511050
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 42.1 bits (21), Expect = 1.4 Identities = 52/61 (85%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 269 gatcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 95873 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 95814 Query: 328 c 328 | Sbjct: 95813 c 95813
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 321 cctactacctgtcgtcgcaggggccgacgcacg 353 ||||||||||| |||||||||| ||||||||| Sbjct: 3516272 cctactacctgcggtcgcagggggcgacgcacg 3516304
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 42.1 bits (21), Expect = 1.4 Identities = 52/61 (85%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 269 gatcgacatgcagctcaagctcgtccccggcaactc-gccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 35421 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 35362 Query: 328 c 328 | Sbjct: 35361 c 35361
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||| | | |||||||| || ||||||||||| |||| ||||| Sbjct: 91399 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacac 91451
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||| |||||||| |||| Sbjct: 349 cacgacgagatcgacatcgagttcatggg 377
>dbj|AK104577.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A12, full insert sequence Length = 1326 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | |||||||||||| |||| Sbjct: 407 gacgcacgacgagctggacttcgagttcttggg 439
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||| |||||||| |||| Sbjct: 358 cacgacgagatcgacatcgagttcatggg 386
>dbj|AK071886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H18, full insert sequence Length = 1359 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctggg 378 ||||||||||||| | |||||||||||| |||| Sbjct: 460 gacgcacgacgagctggacttcgagttcttggg 492
>dbj|AK063216.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D12, full insert sequence Length = 862 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagccctacac 402 ||||||||||||| | | |||||||| || ||||||||||| |||| ||||| Sbjct: 406 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacac 458
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 ||||||||||||||| |||||||| |||| Sbjct: 353 cacgacgagatcgacatcgagttcatggg 381
>ref|XM_479512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1304 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 232 ggctcgcatgggggcgtcgctgct 255
>ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1291 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 234 ggctcgcatgggggcgtcgctgct 257
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cgacgagatcgacttcgagttcctgggg 379 ||||||| | |||||||||||||||||| Sbjct: 345 cgacgagctggacttcgagttcctgggg 372
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cgacgagatcgacttcgagttcctgggg 379 ||||||| | |||||||||||||||||| Sbjct: 437 cgacgagctggacttcgagttcctgggg 464
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 578416 gcgcggcaagatcctcaaca 578435
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 ggctccgggttccagtccaagcac 251 ||||||||||||||| |||||||| Sbjct: 108026 ggctccgggttccagcccaagcac 108003
>gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 227 of 256 of the complete sequence Length = 11399 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cggcgagcttcgacaaggagttcg 150 ||||||||||||||||||| |||| Sbjct: 4271 cggcgagcttcgacaaggatttcg 4294
>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence Length = 195587 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 ggctccgggttccagtccaagcac 251 ||||||||||||||| |||||||| Sbjct: 17463 ggctccgggttccagcccaagcac 17440
>gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence Length = 765 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 gagatcgacttcgagttcctgggg 379 |||||||||||||||||| ||||| Sbjct: 1 gagatcgacttcgagttcttgggg 24
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 1970047 gcgcggcaagatcctcaaca 1970028
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcctggggcacgtcaccggcgagccctac 400 |||||||||||| |||||||| |||| || ||| |||||| |||||| Sbjct: 368 gacgagatcgacatcgagttcatgggcaacctcagcggcgacccctac 415
>emb|X66125.1|OSPER O.sativa mRNA for peroxidase Length = 1287 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 183 ggctcgcatgggggcgtcgctgct 206
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 40.1 bits (20), Expect = 5.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 285 aagctcgtccccggcaact-cgccggcaccgt 315 |||||| |||||||||||| |||||||||||| Sbjct: 328 aagctcatccccggcaactccgccggcaccgt 359
>emb|AJ421977.1|SMA421977 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm199 Length = 480 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421975.1|SMA421975 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm8 Length = 480 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421974.1|SMA421974 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm117 Length = 480 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421973.1|SMA421973 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm98 Length = 480 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 636185 gcgcggcaagatcctcaaca 636204
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 338395 gcgcggcaagatcctcaaca 338376
>gb|AE012271.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 179 of 460 of the complete genome Length = 10028 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 1720 gcgcggcaagatcctcaaca 1701
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cggcgagcttcgacaaggagttcg 150 ||||||||||||||||||| |||| Sbjct: 2519732 cggcgagcttcgacaaggatttcg 2519755
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 3067621 gcgcggcaagatcctcaaca 3067640
>gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR synthetase (purC) gene, partial cds; and TetR family bacterial regulatory protein (ameR), membrane fusion protein (ameA), multidrug efflux transporter RND family protein (ameB), and outer membrane protein (ameC) genes, complete cds Length = 7277 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cggcgagcttcgacaaggagttcg 150 ||||||||||||||||||| |||| Sbjct: 119 cggcgagcttcgacaaggatttcg 142
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcctg 376 |||||||||||||||||| ||||| Sbjct: 4194088 gacgagatcgacttcgagatcctg 4194111
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcctggggcacgtcaccggcgagccctac 400 |||||||||||| |||||||| |||| || ||| |||||| |||||| Sbjct: 356 gacgagatcgacatcgagttcatgggcaacctcagcggcgacccctac 403
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 86363 ggctcgcatgggggcgtcgctgct 86386
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cgacgagatcgacttcgagttcctgggg 379 ||||||| | |||||||||||||||||| Sbjct: 29210 cgacgagctggacttcgagttcctgggg 29237
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9 Length = 71178 Score = 40.1 bits (20), Expect = 5.4 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 270 atcgacatgcagctcaagctcgtccccggcaact-cgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| |||| ||| || ||||| || ||||||||| Sbjct: 24457 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 24516
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cgacgagatcgacttcgagttcctgggg 379 ||||||| | |||||||||||||||||| Sbjct: 437 cgacgagctggacttcgagttcctgggg 464
>dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F01, full insert sequence Length = 1287 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K12, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 233 ggctcgcatgggggcgtcgctgct 256
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cgacgagatcgacttcgagttcctgggg 379 ||||||| | |||||||||||||||||| Sbjct: 531 cgacgagctggacttcgagttcctgggg 558
>dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C17, full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 231 ggctcgcatgggggcgtcgctgct 254
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 5273940 gcgcggcaagatcctcaaca 5273921
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 40.1 bits (20), Expect = 5.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 285 aagctcgtccccggcaact-cgccggcaccgt 315 |||||| |||||||||||| |||||||||||| Sbjct: 353 aagctcatccccggcaactccgccggcaccgt 384
>tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx111 gene for class III peroxidase 111 precursor, exons 1-4 Length = 1250 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 162 ggctcgcatgggggcgtcgctgct 185
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgcggcaagatcctcaaca 189 |||||||||||||||||||| Sbjct: 5587812 gcgcggcaagatcctcaaca 5587793
>gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, complete cds Length = 1306 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggctcgcatgggggcgtcggtgct 94 ||||||||||||||||||| |||| Sbjct: 205 ggctcgcatgggggcgtcgctgct 228
>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete sequence Length = 192913 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ccatccagcattctcagacc 37 |||||||||||||||||||| Sbjct: 68495 ccatccagcattctcagacc 68514
>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence Length = 219361 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ccatccagcattctcagacc 37 |||||||||||||||||||| Sbjct: 56171 ccatccagcattctcagacc 56190 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,319,746 Number of Sequences: 3902068 Number of extensions: 2319746 Number of successful extensions: 40823 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 39532 Number of HSP's gapped (non-prelim): 1247 length of query: 402 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 380 effective length of database: 17,147,199,772 effective search space: 6515935913360 effective search space used: 6515935913360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
