>HDAC4_CHICK (P83038) Histone deacetylase 4 (HD4)|
          Length = 1080

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -2

Query: 415 HRRGRRQLGGARHAHAGQTEVLRVGQQDEDGQ-RREVDRHRPEQDLHQE 272
           H +  RQ     H H  Q E+L +  Q E  + +R++++HR EQ+L ++
Sbjct: 97  HEQLSRQHEAQLHEHIKQQEMLAMKHQQELLEHQRKLEQHRQEQELEKQ 145

>RPC1_TRYBB (P08968) DNA-directed RNA polymerase III largest subunit (EC|
           2.7.7.6)
          Length = 1530

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 421 AHHRRGRRQLGGARHAHAGQTEVLRVGQQDEDGQRREVDRHR 296
           A+H   RR +    H H G T V    +  +   + E DRHR
Sbjct: 402 ANHELMRRLVRNGPHVHPGATTVYLAQEGSKKSLKNERDRHR 443


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,634,810
Number of Sequences: 219361
Number of extensions: 763424
Number of successful extensions: 2516
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2511
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)