ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet51h04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 337 gtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcac 393 ||||||||||||| || | ||||| |||||||||||||||||||| ||||||||||| Sbjct: 249 gtgctgcagcctcatcagcggcctcgccgacctcgaggccgccgtctgcctctgcac 305
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 337 gtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcac 393 ||||||||||||| || | ||||| |||||||||||||||||||| ||||||||||| Sbjct: 157610 gtgctgcagcctcatcagcggcctcgccgacctcgaggccgccgtctgcctctgcac 157666 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcac 393 |||||||||||| || |||||||||||||| Sbjct: 147505 cgacctcgaggcggcggtgtgcctctgcac 147534
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 337 gtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcac 393 ||||||||||||| || | ||||| |||||||||||||||||||| ||||||||||| Sbjct: 27726984 gtgctgcagcctcatcagcggcctcgccgacctcgaggccgccgtctgcctctgcac 27727040 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcac 393 |||||||||||| || |||||||||||||| Sbjct: 27716879 cgacctcgaggcggcggtgtgcctctgcac 27716908
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 198819 ggcctcgccgaccttgaggccgccgtgtgcctctgcaccgc 198859 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 353 ggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| | ||||||||| |||||||| |||||||||||||| Sbjct: 187091 ggtggcctcgtcgacctcgacgccgccgtctgcctctgcaccgc 187134 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 189806 cgacctcgacgccgccgtctgcctctgcaccgc 189838 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgcctgcaacagctgccagc 152 |||||||||||||||||||| Sbjct: 27965578 tgcctgcaacagctgccagc 27965559
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 35886 ggcctcgccgaccttgaggccgccgtgtgcctctgcaccgc 35926 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 353 ggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| | ||||||||| |||||||| |||||||||||||| Sbjct: 24158 ggtggcctcgtcgacctcgacgccgccgtctgcctctgcaccgc 24201 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 26873 cgacctcgacgccgccgtctgcctctgcaccgc 26905
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 132819 ggcctcgccgaccttgaggccgccgtgtgcctctgcaccgc 132859 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 353 ggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| | ||||||||| |||||||| |||||||||||||| Sbjct: 121091 ggtggcctcgtcgacctcgacgccgccgtctgcctctgcaccgc 121134 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 123806 cgacctcgacgccgccgtctgcctctgcaccgc 123838
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 198819 ggcctcgccgaccttgaggccgccgtgtgcctctgcaccgc 198859 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 353 ggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| | ||||||||| |||||||| |||||||||||||| Sbjct: 187091 ggtggcctcgtcgacctcgacgccgccgtctgcctctgcaccgc 187134 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 189806 cgacctcgacgccgccgtctgcctctgcaccgc 189838 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgcctgcaacagctgccagc 152 |||||||||||||||||||| Sbjct: 28056902 tgcctgcaacagctgccagc 28056883
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 63837 ggcctcgccgaccttgaggccgccgtgtgcctctgcaccgc 63797 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 353 ggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| | ||||||||| |||||||| |||||||||||||| Sbjct: 75563 ggtggcctcgtcgacctcgacgccgccgtctgcctctgcaccgc 75520 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 72848 cgacctcgacgccgccgtctgcctctgcaccgc 72816
>gb|AY105972.1| Zea mays PCO122221 mRNA sequence Length = 768 Score = 65.9 bits (33), Expect = 9e-08 Identities = 33/33 (100%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||||||||||||||||||||||||| Sbjct: 336 cgacctcgaggccgccgtgtgcctctgcaccgc 368
>ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 757 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 337 gtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||| || ||||||| ||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 305 gtgctgcggcgtcctcggcggcctcgccgaccttgaggccgccgtctgtctctgcaccgc 364
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 337 gtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||| || ||||||| ||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 26833434 gtgctgcggcgtcctcggcggcctcgccgaccttgaggccgccgtctgtctctgcaccgc 26833493 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcac 393 |||||||||||| || |||||||||||||| Sbjct: 26823846 cgacctcgaggcggcggtgtgcctctgcac 26823875 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 257 ctgaagctgggcgcccgcgccaacgtgttgggcctg 292 ||||||||||||| ||||||||||| |||||||| Sbjct: 26823748 ctgaagctgggcgtgtgcgccaacgtgctgggcctg 26823783
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 337 gtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||| || ||||||| ||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 11977 gtgctgcggcgtcctcggcggcctcgccgaccttgaggccgccgtctgtctctgcaccgc 12036 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcac 393 |||||||||||| || |||||||||||||| Sbjct: 2389 cgacctcgaggcggcggtgtgcctctgcac 2418 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 257 ctgaagctgggcgcccgcgccaacgtgttgggcctg 292 ||||||||||||| ||||||||||| |||||||| Sbjct: 2291 ctgaagctgggcgtgtgcgccaacgtgctgggcctg 2326
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 337 gtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||| || ||||||| ||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 99487 gtgctgcggcgtcctcggcggcctcgccgaccttgaggccgccgtctgtctctgcaccgc 99546 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcac 393 |||||||||||| || |||||||||||||| Sbjct: 89899 cgacctcgaggcggcggtgtgcctctgcac 89928 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 257 ctgaagctgggcgcccgcgccaacgtgttgggcctg 292 ||||||||||||| ||||||||||| |||||||| Sbjct: 89801 ctgaagctgggcgtgtgcgccaacgtgctgggcctg 89836
>dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F04, full insert sequence Length = 757 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 337 gtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||| || ||||||| ||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 305 gtgctgcggcgtcctcggcggcctcgccgaccttgaggccgccgtctgtctctgcaccgc 364
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 283 ggcctagccgacctcgacgccgccgtctgcctctgcaccgc 323
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 62020 ggcctagccgacctcgacgccgccgtctgcctctgcaccgc 62060 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 57280 gccgacctcgacgccgccgtctgcctctgcaccgc 57314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 53987 gccgacctcgacgccgccgtctgcctctgcaccgc 54021 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 49872 gccgacctcgacgccgccgtctgcctctgcaccgc 49906 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 336 agtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcac 393 |||||||| | ||||||| ||||| |||||| | || |||||||||||||||||||| Sbjct: 69022 agtgctgcgggctcctcgccggcctcgccgacgtggacgccgccgtgtgcctctgcac 69079 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 34143 cgacctcgacgccgccgtctgcctctgcaccgc 34175 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 30697 cgacctcgacgccgccgtctgcctctgcaccgc 30729 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 27429 cgacctcgacgccgccgtctgcctctgcaccgc 27461 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||| ||| |||||||| |||||||||||||| Sbjct: 66390 ggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 66430
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 21143686 ggcctagccgacctcgacgccgccgtctgcctctgcaccgc 21143646 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 21155834 gccgacctcgacgccgccgtctgcctctgcaccgc 21155800 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 21151719 gccgacctcgacgccgccgtctgcctctgcaccgc 21151685 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 21148426 gccgacctcgacgccgccgtctgcctctgcaccgc 21148392 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 10072366 gccgacctcgacgccgccgtctgcctctgcaccgc 10072332 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 336 agtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcac 393 |||||||| | ||||||| ||||| |||||| | || |||||||||||||||||||| Sbjct: 21136684 agtgctgcgggctcctcgccggcctcgccgacgtggacgccgccgtgtgcctctgcac 21136627 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 21178277 cgacctcgacgccgccgtctgcctctgcaccgc 21178245 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 21175009 cgacctcgacgccgccgtctgcctctgcaccgc 21174977 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 21171563 cgacctcgacgccgccgtctgcctctgcaccgc 21171531 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||| ||| |||||||| |||||||||||||| Sbjct: 21139316 ggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 21139276 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcac 393 ||||| ||||| |||||||| ||||||||||| Sbjct: 10051334 gccgatctcgatgccgccgtctgcctctgcac 10051303
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 362 ggcctagccgacctcgacgccgccgtctgcctctgcaccgc 402
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 21154950 ggcctagccgacctcgacgccgccgtctgcctctgcaccgc 21154910 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 21167098 gccgacctcgacgccgccgtctgcctctgcaccgc 21167064 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 21162983 gccgacctcgacgccgccgtctgcctctgcaccgc 21162949 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 21159690 gccgacctcgacgccgccgtctgcctctgcaccgc 21159656 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 10078405 gccgacctcgacgccgccgtctgcctctgcaccgc 10078371 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 336 agtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcac 393 |||||||| | ||||||| ||||| |||||| | || |||||||||||||||||||| Sbjct: 21147948 agtgctgcgggctcctcgccggcctcgccgacgtggacgccgccgtgtgcctctgcac 21147891 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 21189541 cgacctcgacgccgccgtctgcctctgcaccgc 21189509 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 21186273 cgacctcgacgccgccgtctgcctctgcaccgc 21186241 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 21182827 cgacctcgacgccgccgtctgcctctgcaccgc 21182795 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||| ||| |||||||| |||||||||||||| Sbjct: 21150580 ggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 21150540 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcac 393 ||||| ||||| |||||||| ||||||||||| Sbjct: 10057373 gccgatctcgatgccgccgtctgcctctgcac 10057342
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 353 ggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| | ||||||||| |||||||| |||||||||||||| Sbjct: 385 ggtggcctcgtcgacctcgacgccgccgtctgcctctgcaccgc 428
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 353 ggtggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| | ||||||||| |||||||| |||||||||||||| Sbjct: 406 ggtggcctcgtcgacctcgacgccgccgtctgcctctgcaccgc 449
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.11), mRNA Length = 411 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 274 gccgacctcgacgccgccgtctgcctctgcaccgc 308
>ref|NM_197675.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.12), mRNA Length = 396 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 259 gccgacctcgacgccgccgtctgcctctgcaccgc 293
>ref|NM_197674.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.13), mRNA Length = 396 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 259 gccgacctcgacgccgccgtctgcctctgcaccgc 293
>ref|NM_195931.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.15), mRNA Length = 381 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 241 gccgacctcgacgccgccgtctgcctctgcaccgc 275
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 89125 gccgacctcgacgccgccgtctgcctctgcaccgc 89091 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtgtgcctctgcac 393 ||||| ||||| |||||||| ||||||||||| Sbjct: 68093 gccgatctcgatgccgccgtctgcctctgcac 68062
>dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H12, full insert sequence Length = 662 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||||| |||||||| |||||||||||||| Sbjct: 303 gccgacctcgacgccgccgtctgcctctgcaccgc 337
>gb|AY108411.1| Zea mays PCO134698 mRNA sequence Length = 667 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| ||||||||||| |||||||||||||| Sbjct: 372 gccgacctagaggccgccgtctgcctctgcaccgc 406
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 238 gtcgtgccccacggacactctgaagctgggcgcccgcgccaacgtgttgggcctggtga 296 ||||||||||| | || | ||||||||||||| ||||||||||| |||||||||||| Sbjct: 214 gtcgtgccccaggaacgcgctgaagctgggcgtgtgcgccaacgtgctgggcctggtga 272 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 |||||| ||||||||||| |||||||||||||| Sbjct: 331 cgacctggaggccgccgtctgcctctgcaccgc 363
>ref|NM_197670.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.17), mRNA Length = 489 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 336 agtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcac 393 |||||||| | ||||||| ||||| |||||| | || |||||||||||||||||||| Sbjct: 314 agtgctgcgggctcctcgccggcctcgccgacgtggacgccgccgtgtgcctctgcac 371
>emb|Z93108.1|MAZ93108 M.acuminata mRNA; clone pBAN UU70 Length = 785 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 350 ctcggtggcctggccgacctcgaggccgccgtgtgcct 387 |||| |||||| | |||||||||||||||||||||||| Sbjct: 342 ctcgatggcctcgtcgacctcgaggccgccgtgtgcct 379
>dbj|AK107851.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-A09, full insert sequence Length = 764 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 336 agtgctgcagcctcctcggtggcctggccgacctcgaggccgccgtgtgcctctgcac 393 |||||||| | ||||||| ||||| |||||| | || |||||||||||||||||||| Sbjct: 393 agtgctgcgggctcctcgccggcctcgccgacgtggacgccgccgtgtgcctctgcac 450
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 258 cgacctcgacgccgccgtctgcctctgcaccgc 290
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 234 cgacctcgacgccgccgtctgcctctgcaccgc 266
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 264 cgacctcgacgccgccgtctgcctctgcaccgc 296
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 319 cgacctcgacgccgccgtctgcctctgcaccgc 351
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 351 cgacctcgacgccgccgtctgcctctgcaccgc 383
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 378 cgacctcgacgccgccgtctgcctctgcaccgc 410
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||||||| |||||||| |||||||||||||| Sbjct: 327 cgacctcgacgccgccgtctgcctctgcaccgc 359
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 371 gaggccgccgtgtgcctctgcacc 394 |||||||||||||||||||||||| Sbjct: 25844183 gaggccgccgtgtgcctctgcacc 25844206 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 cccccagcggcggcggcgac 334 |||||||||||||||||||| Sbjct: 716885 cccccagcggcggcggcgac 716904
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 371 gaggccgccgtgtgcctctgcacc 394 |||||||||||||||||||||||| Sbjct: 126387 gaggccgccgtgtgcctctgcacc 126410
>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full insert sequence Length = 1338 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 371 gaggccgccgtgtgcctctgcacc 394 |||||||||||||||||||||||| Sbjct: 728 gaggccgccgtgtgcctctgcacc 751
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 358 cctggccgacctcgaggccgccg 380 ||||||||||||||||||||||| Sbjct: 23622 cctggccgacctcgaggccgccg 23644
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcac 393 |||||||||||| || |||||||||||||| Sbjct: 366 cgacctcgaggcggcggtgtgcctctgcac 395 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 257 ctgaagctgggcgcccgcgccaacgtgttgggcctg 292 ||||||||||||| ||||||||||| |||||||| Sbjct: 268 ctgaagctgggcgtgtgcgccaacgtgctgggcctg 303
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcac 393 |||||||||||| || |||||||||||||| Sbjct: 258 cgacctcgaggcggcggtgtgcctctgcac 287
>gb|AE004766.1| Pseudomonas aeruginosa PAO1, section 327 of 529 of the complete genome Length = 14138 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 361 ggccgacctcgaggccgccgtg 382 |||||||||||||||||||||| Sbjct: 2083 ggccgacctcgaggccgccgtg 2062
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full insert sequence Length = 833 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcac 393 |||||||||||| || |||||||||||||| Sbjct: 366 cgacctcgaggcggcggtgtgcctctgcac 395 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 257 ctgaagctgggcgcccgcgccaacgtgttgggcctg 292 ||||||||||||| ||||||||||| |||||||| Sbjct: 268 ctgaagctgggcgtgtgcgccaacgtgctgggcctg 303
>gb|AY105149.1| Zea mays PCO087109 mRNA sequence Length = 966 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcac 393 ||||| || ||| ||||||||||||| ||||||||||| Sbjct: 432 ggccttgcggacttcgaggccgccgtctgcctctgcac 469
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds Length = 715 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 364 cgacctcgaggccgccgtgtgcctctgcac 393 |||||||||||| || |||||||||||||| Sbjct: 291 cgacctcgaggcggcggtgtgcctctgcac 320 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 257 ctgaagctgggcgcccgcgccaacgtgttgggcctg 292 ||||||||||||| ||||||||||| |||||||| Sbjct: 193 ctgaagctgggcgtgtgcgccaacgtgctgggcctg 228
>dbj|AB018588.1| Zea mays ZmGR1b mRNA, complete cds Length = 813 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcac 393 ||||| || ||| ||||||||||||| ||||||||||| Sbjct: 299 ggccttgcggacttcgaggccgccgtctgcctctgcac 336
>dbj|AB018587.1| Zea mays ZmGR1a mRNA, complete cds Length = 833 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcac 393 ||||| || ||| ||||||||||||| ||||||||||| Sbjct: 302 ggccttgcggacttcgaggccgccgtctgcctctgcac 339
>gb|AY308809.1| Canis familiaris distal-less homeobox 2 gene, partial sequence Length = 305 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 agccccccagcggcggcggcg 332 ||||||||||||||||||||| Sbjct: 34 agccccccagcggcggcggcg 54
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||| ||| |||||||| |||||||||||||| Sbjct: 298 ggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 338
>gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072P10, complete sequence Length = 147540 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtg 382 ||||||||||||||||||||| Sbjct: 91909 gccgacctcgaggccgccgtg 91889
>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041I05, complete sequence Length = 148785 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtg 382 ||||||||||||||||||||| Sbjct: 141831 gccgacctcgaggccgccgtg 141811
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cctggccgacctcgaggccgc 378 ||||||||||||||||||||| Sbjct: 1446598 cctggccgacctcgaggccgc 1446618
>ref|XM_845102.1| PREDICTED: Canis familiaris similar to Homeobox protein DLX-2, transcript variant 1 (LOC607779), mRNA Length = 1005 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 agccccccagcggcggcggcg 332 ||||||||||||||||||||| Sbjct: 83 agccccccagcggcggcggcg 103
>gb|BT011361.1| Drosophila melanogaster RE66690 full insert cDNA Length = 3816 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ctggcgctgctggtggccaac 115 ||||||||||||||||||||| Sbjct: 348 ctggcgctgctggtggccaac 368
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 ggcctggccgacctcgaggcc 376 ||||||||||||||||||||| Sbjct: 1392515 ggcctggccgacctcgaggcc 1392495
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 cggtggcctggccgacctcga 372 ||||||||||||||||||||| Sbjct: 304341 cggtggcctggccgacctcga 304361
>ref|NM_164742.1| Drosophila melanogaster CG13784-RB, transcript variant B (CG13784), mRNA Length = 1332 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ctggcgctgctggtggccaac 115 ||||||||||||||||||||| Sbjct: 1081 ctggcgctgctggtggccaac 1101
>ref|NM_135260.2| Drosophila melanogaster CG13784-RA, transcript variant A (CG13784), mRNA Length = 3504 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ctggcgctgctggtggccaac 115 ||||||||||||||||||||| Sbjct: 352 ctggcgctgctggtggccaac 372
>gb|AY069857.1| Drosophila melanogaster SD10385 full length cDNA Length = 1323 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ctggcgctgctggtggccaac 115 ||||||||||||||||||||| Sbjct: 1055 ctggcgctgctggtggccaac 1075
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ccccagcggcggcggcgacaa 336 ||||||||||||||||||||| Sbjct: 149034 ccccagcggcggcggcgacaa 149014
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtg 382 ||||||||||||||||||||| Sbjct: 19736336 gccgacctcgaggccgccgtg 19736316
>gb|AF228035.1|AF228035 Tupaia herpesvirus viral terminase (VTER), T94 protein (T94), T93 protein (T93), T92 protein (T92), T90 protein (T90), and T91 protein (T91) genes, complete cds Length = 7221 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 ccccagcggcggcggcgacaa 336 ||||||||||||||||||||| Sbjct: 916 ccccagcggcggcggcgacaa 936
>gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR10E07, complete sequence Length = 176818 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 ctggcgctgctggtggccaac 115 ||||||||||||||||||||| Sbjct: 138389 ctggcgctgctggtggccaac 138369
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ctgctggcgctgctggtggcc 112 ||||||||||||||||||||| Sbjct: 1626414 ctgctggcgctgctggtggcc 1626434 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ggcggcctgcctgctggcgc 101 |||||||||||||||||||| Sbjct: 4292013 ggcggcctgcctgctggcgc 4291994
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 359 ctggccgacctcgaggccgccgtgtgcctctgcaccg 395 ||||| ||||| ||||| || |||||||||||||||| Sbjct: 428 ctggcggacctggaggcggcggtgtgcctctgcaccg 464
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 ctggcgctgctggtggccaac 115 ||||||||||||||||||||| Sbjct: 191614 ctggcgctgctggtggccaac 191594
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 ggcctgcctgctggcgctgctggtg 109 |||| |||||||||||||||||||| Sbjct: 3899944 ggccggcctgctggcgctgctggtg 3899920
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 gccgacctcgaggccgccgtg 382 ||||||||||||||||||||| Sbjct: 20022187 gccgacctcgaggccgccgtg 20022167
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||| ||| |||||||| |||||||||||||| Sbjct: 1954 ggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 1994
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 356 ggcctggccgacctcgaggccgccgtgtgcctctgcaccgc 396 ||||| |||||| ||| |||||||| |||||||||||||| Sbjct: 342 ggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 382
>ref|NM_195927.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.11), mRNA Length = 414 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 362 gccgacctcgaggccgccgtgtgcctctgcac 393 ||||| ||||| |||||||| ||||||||||| Sbjct: 277 gccgatctcgatgccgccgtctgcctctgcac 308
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 75 ccttctcggcggcctgcctgctggcgct 102 |||||||||||||||||| ||||||||| Sbjct: 1386624 ccttctcggcggcctgcc-gctggcgct 1386650
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 75 ccttctcggcggcctgcctgctggcgct 102 |||||||||||||||||| ||||||||| Sbjct: 2611412 ccttctcggcggcctgcc-gctggcgct 2611438
>gb|AE009035.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 61 of 256 of the complete sequence Length = 11766 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 gcgtcggcgtcggcaagccc 316 |||||||||||||||||||| Sbjct: 6560 gcgtcggcgtcggcaagccc 6541
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 gcgtcggcgtcggcaagccc 316 |||||||||||||||||||| Sbjct: 2794314 gcgtcggcgtcggcaagccc 2794295
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgcctgcaacagctgccagc 152 |||||||||||||||||||| Sbjct: 59448 tgcctgcaacagctgccagc 59467
>gb|AY459342.1| Oryza sativa (japonica cultivar-group) clone CLC13210-1 R2R3-MYB gene region Length = 5648 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 cccccagcggcggcggcgac 334 |||||||||||||||||||| Sbjct: 1739 cccccagcggcggcggcgac 1758
>gb|AC114484.2| Homo sapiens chromosome 1 clone RP4-615B18, complete sequence Length = 118763 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagcctcctcggtggcctg 361 |||||||||||||||||||| Sbjct: 102763 gcagcctcctcggtggcctg 102782
>emb|AL138787.11| Human DNA sequence from clone RP4-665N4 on chromosome 1p34.1-35.3 Contains the 3' end of the EIF2C3 gene for eukaryotic translation initiation factor 2C, 3, a putative novel transcript, a implantation-associated protein (DKFZp564K142) processed pseudogene, the TEKT2 gene for tektin 2 (testicular), the COL8A2 gene for collagen, type VIII, alpha 2, complete sequence Length = 128133 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagcctcctcggtggcctg 361 |||||||||||||||||||| Sbjct: 234 gcagcctcctcggtggcctg 253
>gb|BT009046.1| Triticum aestivum clone wdk9n.pk001.j17:fis, full insert mRNA sequence Length = 1682 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cccccagcggcggcggcgac 334 |||||||||||||||||||| Sbjct: 1422 cccccagcggcggcggcgac 1403
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 365 gacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| ||||| |||||||||||||||| Sbjct: 270 gacctcgacgccgcattgtgcctctgcaccgc 301
>emb|X92556.1|SEHGTABCP S.erythraea hgtA, bcpA1, and orf122 genes Length = 4120 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ttctcggcggcctgcctgct 96 |||||||||||||||||||| Sbjct: 1272 ttctcggcggcctgcctgct 1253
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctgctggcgctgctggtgg 110 |||||||||||||||||||| Sbjct: 3403840 cctgctggcgctgctggtgg 3403821
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ggcctgcctgctggcgctgc 104 |||||||||||||||||||| Sbjct: 174810 ggcctgcctgctggcgctgc 174791
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 ggcctgcctgctggcgctgc 104 |||||||||||||||||||| Sbjct: 63309 ggcctgcctgctggcgctgc 63328
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ggcctgcctgctggcgctgc 104 |||||||||||||||||||| Sbjct: 50412 ggcctgcctgctggcgctgc 50393
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 75 ccttctcggcggcctgcctgctggcgct 102 |||||||||||||||||| ||||||||| Sbjct: 1770740 ccttctcggcggcctgcc-gctggcgct 1770714
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cggcggcctgcctgctggcg 100 |||||||||||||||||||| Sbjct: 218752 cggcggcctgcctgctggcg 218771
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ggcgctgctggtggccaaca 116 |||||||||||||||||||| Sbjct: 3293550 ggcgctgctggtggccaaca 3293569 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ggcgctgctggtggccaaca 116 |||||||||||||||||||| Sbjct: 819863 ggcgctgctggtggccaaca 819882
>gb|AC115458.5| Rattus norvegicus 13 BAC CH230-190J23 (Children's Hospital Oakland Research Institute) complete sequence Length = 69404 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaaccctcctacctcactc 20 |||||||||||||||||||| Sbjct: 1703 aaaaccctcctacctcactc 1684
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 gcgtcggcgtcggcaagccc 316 |||||||||||||||||||| Sbjct: 665438 gcgtcggcgtcggcaagccc 665419
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 cctggccgacctcgaggccgccgt 381 ||||||||||| |||||||||||| Sbjct: 36905808 cctggccgaccgcgaggccgccgt 36905831
>gb|AE004461.1| Pseudomonas aeruginosa PAO1, section 22 of 529 of the complete genome Length = 11266 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tgcctgctggcgctgctggt 108 |||||||||||||||||||| Sbjct: 1330 tgcctgctggcgctgctggt 1349
>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1096A10 Length = 150976 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 cctggccgacctcgaggccgccgt 381 ||||||||||| |||||||||||| Sbjct: 121386 cctggccgaccgcgaggccgccgt 121409
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 cccccagcggcggcggcgac 334 |||||||||||||||||||| Sbjct: 19 cccccagcggcggcggcgac 38
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 cccccagcggcggcggcgac 334 |||||||||||||||||||| Sbjct: 123313 cccccagcggcggcggcgac 123332
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 ctcggcggcctgcctgctggcgctgctg 106 |||||||||||||||| |||||| |||| Sbjct: 2604426 ctcggcggcctgcctgatggcgcggctg 2604399
>gb|AY105889.1| Zea mays PCO106909 mRNA sequence Length = 1420 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 gaggccgccgtgtgcctctgcacc 394 ||||| |||||||||||||||||| Sbjct: 831 gaggcggccgtgtgcctctgcacc 854
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 365 gacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| ||||| |||||||||||||||| Sbjct: 332 gacctcgacgccgcattgtgcctctgcaccgc 363
>dbj|AB074880.1| Chlamydomonas reinhardtii PTB1 mRNA for putative Pi-transporter homologue B1, complete cds Length = 6032 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 86 gcctgcctgctggcgctgctggtggcca 113 |||||||||||| || |||||||||||| Sbjct: 821 gcctgcctgctgacggtgctggtggcca 848
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 365 gacctcgaggccgccgtgtgcctctgcaccgc 396 |||||||| ||||| |||||||||||||||| Sbjct: 345 gacctcgacgccgcattgtgcctctgcaccgc 376 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,040,911 Number of Sequences: 3902068 Number of extensions: 3040911 Number of successful extensions: 88191 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 84890 Number of HSP's gapped (non-prelim): 3307 length of query: 396 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 374 effective length of database: 17,147,199,772 effective search space: 6413052714728 effective search space used: 6413052714728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
