>gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence
          Length = 208667

 Score = 50.1 bits (25), Expect = 8e-04
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 6      cttccacttctctctcctcctcgtccatc 34
              |||||||||||||||||||||| ||||||
Sbjct: 131904 cttccacttctctctcctcctcctccatc 131932

>gb|AC158917.6| Mus musculus chromosome 5, clone RP24-238D24, complete sequence
          Length = 184805

 Score = 50.1 bits (25), Expect = 8e-04
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 6      cttccacttctctctcctcctcgtccatc 34
              |||||||||||||||||||||| ||||||
Sbjct: 153069 cttccacttctctctcctcctcctccatc 153041

>ref|NM_125960.2| Arabidopsis thaliana metalloendopeptidase AT5G65620 mRNA, complete
           cds
          Length = 2918

 Score = 42.1 bits (21), Expect = 0.20
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 3   ccacttccacttctctctcctcctc 27
           |||||||||| ||||||||||||||
Sbjct: 179 ccacttccacctctctctcctcctc 203

>gb|AY142682.1| Arabidopsis thaliana putative oligopeptidase A (At5g65620) mRNA,
           complete cds
          Length = 2407

 Score = 42.1 bits (21), Expect = 0.20
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 3   ccacttccacttctctctcctcctc 27
           |||||||||| ||||||||||||||
Sbjct: 176 ccacttccacctctctctcctcctc 200

>gb|AY045936.1| Arabidopsis thaliana putative oligopeptidase A (At5g65620) mRNA,
           complete cds
          Length = 2510

 Score = 42.1 bits (21), Expect = 0.20
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 3   ccacttccacttctctctcctcctc 27
           |||||||||| ||||||||||||||
Sbjct: 179 ccacttccacctctctctcctcctc 203

>dbj|AB026639.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L13
          Length = 63921

 Score = 42.1 bits (21), Expect = 0.20
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 3     ccacttccacttctctctcctcctc 27
             |||||||||| ||||||||||||||
Sbjct: 38429 ccacttccacctctctctcctcctc 38453

>emb|AL671275.11| Mouse DNA sequence from clone RP23-344J21 on chromosome X, complete
              sequence
          Length = 160338

 Score = 42.1 bits (21), Expect = 0.20
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      tccacttccacttctctctcc 22
              |||||||||||||||||||||
Sbjct: 104619 tccacttccacttctctctcc 104639

>gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete sequence
          Length = 154737

 Score = 40.1 bits (20), Expect = 0.79
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atccacttccacttctctct 20
             ||||||||||||||||||||
Sbjct: 22022 atccacttccacttctctct 22003

>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 1/11
          Length = 348780

 Score = 40.1 bits (20), Expect = 0.79
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     cttctctctcctcctcgtcc 31
              ||||||||||||||||||||
Sbjct: 231697 cttctctctcctcctcgtcc 231678

>gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosome 7, complete sequence
          Length = 186272

 Score = 40.1 bits (20), Expect = 0.79
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atccacttccacttctctct 20
             ||||||||||||||||||||
Sbjct: 97054 atccacttccacttctctct 97073

>gb|AC018733.8| Homo sapiens BAC clone RP11-337H6 from 2, complete sequence
          Length = 163117

 Score = 40.1 bits (20), Expect = 0.79
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     cacttccacttctctctcct 23
             ||||||||||||||||||||
Sbjct: 20497 cacttccacttctctctcct 20516

>gb|U46933.1|AAU46933 Avian adenovirus CELO, complete genome
          Length = 43804

 Score = 40.1 bits (20), Expect = 0.79
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 3     ccacttccacttctctctcctcctcgtccatc 34
             ||||||||||||||  ||||||||| ||||||
Sbjct: 23122 ccacttccacttcttcctcctcctcttccatc 23153

>gb|AC150916.3| Bos taurus  BAC CH240-309L24 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 158580

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     ccacttctctctcctcctc 27
             |||||||||||||||||||
Sbjct: 19142 ccacttctctctcctcctc 19160

>gb|AC149679.2| Bos taurus  BAC CH240-27A8 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 196187

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     ccacttctctctcctcctc 27
             |||||||||||||||||||
Sbjct: 73864 ccacttctctctcctcctc 73846

>gb|AC124198.2| Mus musculus BAC clone RP23-306E4 from 8, complete sequence
          Length = 172546

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    acttctctctcctcctcgt 29
             |||||||||||||||||||
Sbjct: 80060 acttctctctcctcctcgt 80078

>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence
          Length = 209021

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      cttccacttctctctcctc 24
              |||||||||||||||||||
Sbjct: 107880 cttccacttctctctcctc 107862

>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part
             of the Ptprd gene for receptor type protein tyrosine
             phosphatase D and a CpG island, complete sequence
          Length = 199012

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     cttccacttctctctcctc 24
             |||||||||||||||||||
Sbjct: 65270 cttccacttctctctcctc 65252

>emb|AJ821836.1| Guillardia theta partial mRNA for hypothetical protein
          Length = 498

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 15  ctctctcctcctcgtccat 33
           |||||||||||||||||||
Sbjct: 402 ctctctcctcctcgtccat 384

>gb|U21119.1|SSIGFBPII3 Sus scrofa IGF binding protein-2 (IGF) gene, exon 4 and complete
          cds
          Length = 772

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 2  tccacttccacttctctctcctc 24
          ||||| |||||||||||||||||
Sbjct: 69 tccacctccacttctctctcctc 91

>ref|XM_685588.1| PREDICTED: Danio rerio similar to microfilament and actin filament
            cross-linker protein isoform a (LOC562190), mRNA
          Length = 10185

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 6    cttccacttctctctcctcctcgtcca 32
            ||||||||||| |||||||||| ||||
Sbjct: 4129 cttccacttctttctcctcctcctcca 4103

>gb|AC080135.16| Homo sapiens 3 BAC RP11-782A22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 63601

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    tccacttccacttctctct 20
            |||||||||||||||||||
Sbjct: 8972 tccacttccacttctctct 8990

>gb|AC034103.7|AC034103 Homo sapiens chromosome 15 clone CTD-3231F14 map 15q21.2, complete
             sequence
          Length = 165416

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     tccacttctctctcctcct 26
             |||||||||||||||||||
Sbjct: 76396 tccacttctctctcctcct 76414

>emb|BX284639.15| Mouse DNA sequence from clone RP24-87L14 on chromosome 2, complete
             sequence
          Length = 115602

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     ccacttctctctcctcctc 27
             |||||||||||||||||||
Sbjct: 70378 ccacttctctctcctcctc 70360

>ref|XM_564898.1| Anopheles gambiae str. PEST ENSANGP00000026226
           (ENSANGG00000023692), partial mRNA
          Length = 399

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 9   ccacttctctctcctcctcgtcc 31
           ||||||| |||||||||||||||
Sbjct: 215 ccacttccctctcctcctcgtcc 237

>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III
             gene, partial cds, complete sequence
          Length = 188078

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     cttccacttctctctcctc 24
             |||||||||||||||||||
Sbjct: 51563 cttccacttctctctcctc 51581

>emb|AL935320.10| Mouse DNA sequence from clone RP23-275N21 on chromosome 2, complete
              sequence
          Length = 161265

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 9      ccacttctctctcctcctc 27
              |||||||||||||||||||
Sbjct: 103348 ccacttctctctcctcctc 103330

>emb|AL713913.10| Mouse DNA sequence from clone RP23-125F10 on chromosome 2, complete
             sequence
          Length = 190485

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     ccacttctctctcctcctc 27
             |||||||||||||||||||
Sbjct: 63826 ccacttctctctcctcctc 63808

>emb|AL671878.8| Mouse DNA sequence from clone RP23-184D5 on chromosome 4, complete
              sequence
          Length = 230395

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      ccacttccacttctctctc 21
              |||||||||||||||||||
Sbjct: 184526 ccacttccacttctctctc 184508


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 773,276
Number of Sequences: 3902068
Number of extensions: 773276
Number of successful extensions: 77106
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77059
Number of HSP's gapped (non-prelim): 47
length of query: 77
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 56
effective length of database: 17,151,101,840
effective search space: 960461703040
effective search space used: 960461703040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)