ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet51f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ288846.1| Brassica oleracea var. botrytis NADH dehydrogenas... 115 5e-23
2gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome 111 8e-22
3gb|AY360386.1| Oryza sativa (japonica cultivar-group) chromosome... 111 8e-22
4gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit... 111 8e-22
5gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion... 111 8e-22
6gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion... 111 8e-22
7emb|X62100.1|TAND6 T.aestivum ND6 gene for NADH-ubiquinone oxido... 111 8e-22
8gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-1... 111 8e-22
9gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA... 111 8e-22
10gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar N... 111 8e-22
11emb|X87209.1|HATRNASFP H.annuus mitochondrial trnS, trnF and trn... 111 8e-22
12dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 111 8e-22
13dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 111 8e-22
14dbj|AP005832.2| Oryza sativa (japonica cultivar-group) genomic D... 111 8e-22
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 111 8e-22
16emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa... 111 8e-22
17dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial geno... 111 8e-22
18dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete ge... 111 8e-22
19dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge... 111 8e-22
20dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial geno... 111 8e-22
21emb|X97769.1|ZMMITNAD6 Z.mays mitochondrial nad6 111 8e-22
22dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochond... 111 8e-22
23dbj|D13106.1|RICMT10 Oryza sativa (japonica cultivar-group) mito... 111 8e-22
24emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial se... 109 3e-21
25gb|AF279442.1| Lupinus luteus cv. Topaz NADH dehydrogenase subun... 107 1e-20
26gb|AC006225.3| Arabidopsis thaliana chromosome 2 BAC T5E7 genomi... 103 2e-19
27emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome 103 2e-19
28dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome 103 2e-19
29gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11,... 103 2e-19
30emb|X68256.1|MIBCNADH B.campestris mitochondrion gene for NADH d... 103 2e-19
31emb|AJ132231.1|PSA132231 Pisum sativum mitochondrial rpl5, rps14... 103 2e-19
32gb|DQ257687.1| Brassica oleracea var. botrytis NADH dehydrogenas... 103 2e-19
33gb|AY832198.1| Lonicera sp. Bergthorsson 0301 NADH dehydrogenase... 103 2e-19
34gb|AY832196.1| Agave attenuata NADH dehydrogenase subunit 6 (nad... 103 2e-19
35gb|AY832190.1| Philodendron oxycardium NADH dehydrogenase subuni... 103 2e-19
36gb|AY061992.1| Daucus carota ATP synthase subunit 8 (atp8-1) gen... 98 1e-17
37gb|AY007818.1| Daucus carota NADH dehydrogenase subunit 6 (nad6)... 98 1e-17
38gb|AY007819.1| Daucus carota ATPase8 (ATP8) gene, ATP8-Sp1a alle... 98 1e-17
39emb|AJ009982.1|DCA9982 Daucus carota mitochondrial nad6 and trun... 98 1e-17
40ref|NM_126756.1| Arabidopsis thaliana oxidoreductase AT2G07718 m... 96 5e-17
41gb|AF279441.1| Lupinus mutabilis NADH dehydrogenase subunit 6 (n... 96 5e-17
42gb|AF279439.2| Lupinus luteus cv. Topaz NADH dehydrogenase subun... 96 5e-17
43gb|AY134476.1| Lupinus albus cultivar Wat NADH dehydrogenase sub... 96 5e-17
44gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genom... 96 5e-17
45gb|AY832194.1| Platanus occidentalis NADH dehydrogenase subunit ... 96 5e-17
46gb|AY832193.1| Piper betle NADH dehydrogenase subunit 6 (nad6) g... 96 5e-17
47gb|AY832191.1| Asarum sp. Qiu 96018 NADH dehydrogenase subunit 6... 96 5e-17
48gb|AY832189.1| Mahonia bealei NADH dehydrogenase subunit 6 (nad6... 96 5e-17
49gb|AY832185.1| Calycanthus floridus NADH dehydrogenase subunit 6... 96 5e-17
50gb|AY832183.1| Amborella trichopoda NADH dehydrogenase subunit 6... 96 5e-17
51gb|AY832187.1| Laurus nobilis NADH dehydrogenase subunit 6 (nad6... 92 8e-16
52gb|AF279440.2| Lupinus angustifolius cv. Mirela NADH dehydrogena... 88 1e-14
53gb|AY832197.1| Eschscholzia californica NADH dehydrogenase subun... 88 1e-14
54gb|AY832188.1| Liriodendron tulipifera NADH dehydrogenase subuni... 88 1e-14
55gb|AY832192.1| Pinus thunbergii NADH dehydrogenase subunit 6 (na... 80 3e-12
56gb|AY832195.1| Zamia integrifolia NADH dehydrogenase subunit 6 (... 62 7e-07
57gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 0.65
58gb|AC155822.2| Mus musculus BAC clone RP23-319J10 from chromosom... 42 0.65
59gb|AC154629.2| Mus musculus BAC clone RP23-313M15 from chromosom... 42 0.65
60dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complet... 42 0.65
61gb|AY832184.1| Amborella trichopoda NADH dehydrogenase subunit 6... 42 0.65
62gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.6
63gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.6
64gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 2.6
65gb|AC113270.8| Mus musculus chromosome 7, clone RP23-375O10, com... 40 2.6
66dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
67dbj|AP003795.2| Gallus gallus genomic DNA, chromosome 5, clone:1... 40 2.6
68emb|BX322793.7| Zebrafish DNA sequence from clone CH211-208I8 in... 40 2.6
69gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.6
70gb|AC159011.2| Gallus gallus BAC clone CH261-107A24 from chromos... 40 2.6
71emb|AL672259.9| Mouse DNA sequence from clone RP23-169M4 on chro... 40 2.6 
>gb|DQ288846.1| Brassica oleracea var. botrytis NADH dehydrogenase subunit 6
          mRNA, partial cds; mitochondrial
          Length = 602

 Score =  115 bits (58), Expect = 5e-23
 Identities = 58/58 (100%)
 Strand = Plus / Plus

                                                                    
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttttt 58
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttttt 89
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>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565034 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 565089
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>gb|AY360386.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0017M13,
             complete sequence
          Length = 161902

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81108 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 81163
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>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696450 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 696505
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>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362689 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 362634
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>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531228 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 531283
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>emb|X62100.1|TAND6 T.aestivum ND6 gene for NADH-ubiquinone oxidoreductase (subunit 6)
          Length = 1286

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                   
Query: 1   tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 560
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>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion,
             complete genome
          Length = 491515

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60650 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 60595
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>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion,
             complete genome
          Length = 490673

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60155 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 60100
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>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare
             mitochondrion, complete genome
          Length = 490669

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60155 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 60100
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>emb|X87209.1|HATRNASFP H.annuus mitochondrial trnS, trnF and trnP genes
          Length = 3125

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                    
Query: 1    tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 1469
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1        tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20574812 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 20574867



 Score =  109 bits (55), Expect = 3e-21
 Identities = 55/55 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1        tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtt 55
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13427444 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtt 13427390
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1        tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13356633 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 13356688
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>dbj|AP005832.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1136D08
          Length = 176635

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108102 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 108157
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1        tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20501026 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 20501081



 Score =  109 bits (55), Expect = 3e-21
 Identities = 55/55 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1        tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtt 55
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13381718 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtt 13381664
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>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 143618

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18421 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 18366
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>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 368801

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193419 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 193474
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>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281207 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 281152
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>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313432 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 313377
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>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 501020

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430847 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 430792
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>emb|X97769.1|ZMMITNAD6 Z.mays mitochondrial nad6
          Length = 973

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                   
Query: 1   tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 342
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>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete
             genome
          Length = 490520

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60105 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 60050
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>dbj|D13106.1|RICMT10 Oryza sativa (japonica cultivar-group) mitochondrial pseudogene for
           tRNA-Ile, clone:pMTVSCT14
          Length = 811

 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                   
Query: 1   tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 761
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>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13
            of library OSJNBa from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 104259

 Score =  109 bits (55), Expect = 3e-21
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                   
Query: 1    tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtt 55
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5536 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtt 5590
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>gb|AF279442.1| Lupinus luteus cv. Topaz NADH dehydrogenase subunit 6 (nad6)
          mRNA, complete cds; mitochondrial gene for
          mitochondrial product
          Length = 618

 Score =  107 bits (54), Expect = 1e-20
 Identities = 57/58 (98%)
 Strand = Plus / Plus

                                                                    
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttttt 58
          |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 32 tggtctctggtttgatggttgtacgtgcaaaaaatccggtacattccgttttgttttt 89
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>gb|AC006225.3| Arabidopsis thaliana chromosome 2 BAC T5E7 genomic sequence, complete
             sequence
          Length = 88249

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 55425 tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgttttgttt 55480
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>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome
          Length = 366924

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Minus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 77228 tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgttttgttt 77173



 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 169959 tggtctctggtttgatggttgcacgtgctaaaaatctggtacattccgttttgttt 170014
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>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome
          Length = 221853

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1      tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
              ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 164913 tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgttttgttt 164968
to top
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence
          Length = 124347

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 86260 tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgttttgttt 86315
to top
>emb|X68256.1|MIBCNADH B.campestris mitochondrion gene for NADH dehydrogenase subunit 6
          Length = 941

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                   
Query: 1   tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 317 tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgttttgttt 372
to top
>emb|AJ132231.1|PSA132231 Pisum sativum mitochondrial rpl5, rps14 and cob genes
          Length = 6595

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                    
Query: 1    tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1310 tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgttttgttt 1365
to top
>gb|DQ257687.1| Brassica oleracea var. botrytis NADH dehydrogenase subunit 6 (nad6)
           gene, complete cds; mitochondrial
          Length = 1256

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                   
Query: 1   tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 387 tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgttttgttt 442
to top
>gb|AY832198.1| Lonicera sp. Bergthorsson 0301 NADH dehydrogenase subunit 6
          (nad6) gene, partial cds; mitochondrial
          Length = 533

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 20 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgtttcgttt 75
to top
>gb|AY832196.1| Agave attenuata NADH dehydrogenase subunit 6 (nad6) gene, partial
          cds; mitochondrial
          Length = 475

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 35 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgtttcgttt 90
to top
>gb|AY832190.1| Philodendron oxycardium NADH dehydrogenase subunit 6 (nad6) gene,
          partial cds; mitochondrial
          Length = 547

 Score =  103 bits (52), Expect = 2e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 20 tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgtttcgttt 75
to top
>gb|AY061992.1| Daucus carota ATP synthase subunit 8 (atp8-1) gene, complete cds;
            atp9 pseudogene, complete sequence; and NADH
            dehydrogenase subunit 6 (nad6) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 4634

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1    tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtttt 57
            ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4304 tggtctctgctttgatggttgtacgtgctaaaaatccggtacattccgtttcgtttt 4360
to top
>gb|AY007818.1| Daucus carota NADH dehydrogenase subunit 6 (nad6) gene, nad6-N
            allele, complete cds; ATPase8 (atp8) gene, atp8-N allele,
            complete cds; chimeric ATPase9 (atp9) gene, atp9-N2
            allele, complete cds; and chimeric ATPase6 (atp6) gene,
            atp6-N2 allele, partial cds; mitochondrial genes for
            mitochondrial products
          Length = 4474

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                     
Query: 1    tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtttt 57
            ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1277 tggtctctgctttgatggttgtacgtgctaaaaatccggtacattccgtttcgtttt 1221
to top
>gb|AY007819.1| Daucus carota ATPase8 (ATP8) gene, ATP8-Sp1a allele, complete cds;
            truncated ATPase9 (ATP9) gene, ATP9-Sp2 allele, complete
            cds; and NADH dehydrogenase subunit 6 (NAD6) gene,
            complete cds; mitochondrial genes for mitochondrial
            products
          Length = 5704

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1    tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtttt 57
            ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3234 tggtctctgctttgatggttgtacgtgctaaaaatccggtacattccgtttcgtttt 3290
to top
>emb|AJ009982.1|DCA9982 Daucus carota mitochondrial nad6 and truncated atp9 gene
          Length = 1780

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1    tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtttt 57
            ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1104 tggtctctgctttgatggttgtacgtgctaaaaatccggtacattccgtttcgtttt 1160
to top
>ref|NM_126756.1| Arabidopsis thaliana oxidoreductase AT2G07718 mRNA, complete cds
          Length = 942

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                   
Query: 1   tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
           ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 164 tggtctctggtttgatggttgcacgtgctaaaaatctggtacattccgttttgttt 219
to top
>gb|AF279441.1| Lupinus mutabilis NADH dehydrogenase subunit 6 (nad6) gene,
          complete cds; mitochondrial gene for mitochondrial
          product
          Length = 618

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 32 tggtctctggtttgatggttgcacgtgcaaaaaatccggtacattccgttttgttt 87
to top
>gb|AF279439.2| Lupinus luteus cv. Topaz NADH dehydrogenase subunit 6 (nad6) gene,
           complete cds; mitochondrial gene for mitochondrial
           product
          Length = 973

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                   
Query: 1   tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
           ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 387 tggtctctggtttgatggttgcacgtgcaaaaaatccggtacattccgttttgttt 442
to top
>gb|AY134476.1| Lupinus albus cultivar Wat NADH dehydrogenase subunit 6 (nad6)
          gene, complete cds; mitochondrial gene for
          mitochondrial product
          Length = 618

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 32 tggtctctggtttgatggttgcacgtgcaaaaaatccggtacattccgttttgttt 87
to top
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete
             sequence
          Length = 114068

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1     tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
             ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 97837 tggtctctggtttgatggttgcacgtgctaaaaatctggtacattccgttttgttt 97892
to top
>gb|AY832194.1| Platanus occidentalis NADH dehydrogenase subunit 6 (nad6) gene,
          partial cds; mitochondrial
          Length = 532

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 20 tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgtttcgttt 75
to top
>gb|AY832193.1| Piper betle NADH dehydrogenase subunit 6 (nad6) gene, partial
          cds; mitochondrial
          Length = 534

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 19 tggtctctggtttgatggttgtacgtgctaaaaatccagtacattccgtttcgttt 74
to top
>gb|AY832191.1| Asarum sp. Qiu 96018 NADH dehydrogenase subunit 6 (nad6) gene,
          partial cds; mitochondrial
          Length = 500

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 20 tggtctctggtttgatggttgtacgtgctaaaaatccggtacactccgtttcgttt 75
to top
>gb|AY832189.1| Mahonia bealei NADH dehydrogenase subunit 6 (nad6) gene, partial
          cds; mitochondrial
          Length = 537

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 18 tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgtttcgttt 73
to top
>gb|AY832185.1| Calycanthus floridus NADH dehydrogenase subunit 6 (nad6) gene,
          partial cds; mitochondrial
          Length = 536

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 18 tggtctctggtttgatggttgtacgtgctaaaaatccggtacatcccgtttcgttt 73
to top
>gb|AY832183.1| Amborella trichopoda NADH dehydrogenase subunit 6 (nad6) gene,
          partial cds; mitochondrial
          Length = 536

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 9  tggtctctggtttgatggttgcacgtgctaaaaatccggtacattccgtttcgttt 64
to top
>gb|AY832187.1| Laurus nobilis NADH dehydrogenase subunit 6 (nad6) gene, partial
          cds; mitochondrial
          Length = 548

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                
Query: 3  gtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          |||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 22 gtctctggtttgatggttgtacgtgctaaaaatccggtacatcccgtttcgttt 75
to top
>gb|AF279440.2| Lupinus angustifolius cv. Mirela NADH dehydrogenase subunit 6
           (nad6) gene, complete cds; mitochondrial gene for
           mitochondrial product
          Length = 973

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 1   tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
           ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||
Sbjct: 387 tggtctctggtttgatggttgcacatgcaaaaaatccggtacattccgttttgttt 442
to top
>gb|AY832197.1| Eschscholzia californica NADH dehydrogenase subunit 6 (nad6)
          gene, partial cds; mitochondrial
          Length = 533

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||
Sbjct: 20 tggtctctggtttgatggttgcacgtgcaaaaaatccggtacattccgtttcgttt 75
to top
>gb|AY832188.1| Liriodendron tulipifera NADH dehydrogenase subunit 6 (nad6) gene,
          partial cds; mitochondrial
          Length = 531

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                  
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgttt 56
          ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||
Sbjct: 17 tggtctctggtttgatggttgcacgtgctaaaaatccggtacatcccgtttcgttt 72
to top
>gb|AY832192.1| Pinus thunbergii NADH dehydrogenase subunit 6 (nad6) gene,
          partial cds; mitochondrial
          Length = 560

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                      
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacat 44
          ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 32 tggtctctggtttgatggttgtacgtgctaaaaatccagtacat 75
to top
>gb|AY832195.1| Zamia integrifolia NADH dehydrogenase subunit 6 (nad6) gene,
          partial cds; mitochondrial
          Length = 546

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                             
Query: 1  tggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttt 51
          ||||| |||||| |||||||||||||||| ||||||| |||||| ||||||
Sbjct: 19 tggtccctggttcgatggttgtacgtgctgaaaatccagtacatcccgttt 69
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 125     gaccccaccgatgcccaactg 145
               |||||||||||||||||||||
Sbjct: 3641585 gaccccaccgatgcccaactg 3641565
to top
>gb|AC155822.2| Mus musculus BAC clone RP23-319J10 from chromosome 16, complete
             sequence
          Length = 192526

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   tagcttgtgccacctcaaggc 195
             |||||||||||||||||||||
Sbjct: 14303 tagcttgtgccacctcaaggc 14323
to top
>gb|AC154629.2| Mus musculus BAC clone RP23-313M15 from chromosome 16, complete sequence
          Length = 147288

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    tagcttgtgccacctcaaggc 195
              |||||||||||||||||||||
Sbjct: 131081 tagcttgtgccacctcaaggc 131101
to top
>dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complete genome
          Length = 105340

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 22    tacgtgctaaaaatccggtacattccgttttgttttt 58
             |||||||||||||||| || ||||| ||||| |||||
Sbjct: 60194 tacgtgctaaaaatccagtccattctgttttattttt 60230
to top
>gb|AY832184.1| Amborella trichopoda NADH dehydrogenase subunit 6 (nad6) gene,
          partial cds; mitochondrial
          Length = 539

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 22 tacgtgctaaaaatccggtacattccgttttgttttt 58
          |||||||||||||||| || ||||| ||||| |||||
Sbjct: 30 tacgtgctaaaaatccagttcattctgttttcttttt 66
to top
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 155   caggcggacctatggcgccatagcttgtgccacctcaaggccat 198
             ||||| |||||||||||||| ||||| | | |||||| ||||||
Sbjct: 43569 caggccgacctatggcgccacagcttctcctacctcacggccat 43612
to top
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 155   caggcggacctatggcgccatagcttgtgccacctcaaggccat 198
             ||||| |||||||||||||| ||||| | | |||||| ||||||
Sbjct: 52206 caggccgacctatggcgccacagcttctcctacctcacggccat 52163
to top
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 166     atggcgccatagcttgtgcc 185
               ||||||||||||||||||||
Sbjct: 4526138 atggcgccatagcttgtgcc 4526119
to top
>gb|AC113270.8| Mus musculus chromosome 7, clone RP23-375O10, complete sequence
          Length = 175280

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    ttttgtttttaacaaacaca 68
             ||||||||||||||||||||
Sbjct: 87156 ttttgtttttaacaaacaca 87137
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                           
Query: 155     caggcggacctatggcgccatagcttgtgccacctcaaggccat 198
               ||||| |||||||||||||| ||||| | | |||||| ||||||
Sbjct: 7138986 caggccgacctatggcgccacagcttctcctacctcacggccat 7138943
to top
>dbj|AP003795.2| Gallus gallus genomic DNA, chromosome 5, clone:192C9, complete sequence
          Length = 187259

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     acattccgttttgtttttaa 60
              ||||||||||||||||||||
Sbjct: 102055 acattccgttttgtttttaa 102074
to top
>emb|BX322793.7| Zebrafish DNA sequence from clone CH211-208I8 in linkage group 9,
              complete sequence
          Length = 192039

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aacacacaacactgcaatca 82
              ||||||||||||||||||||
Sbjct: 117322 aacacacaacactgcaatca 117341
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                           
Query: 155     caggcggacctatggcgccatagcttgtgccacctcaaggccat 198
               ||||| |||||||||||||| ||||| | | |||||| ||||||
Sbjct: 7204957 caggccgacctatggcgccacagcttctcctacctcacggccat 7204914
to top
>gb|AC159011.2| Gallus gallus BAC clone CH261-107A24 from chromosome unknown, complete
             sequence
          Length = 249034

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    acattccgttttgtttttaa 60
             ||||||||||||||||||||
Sbjct: 36116 acattccgttttgtttttaa 36135
to top
>emb|AL672259.9| Mouse DNA sequence from clone RP23-169M4 on chromosome 2, complete
             sequence
          Length = 179832

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   gctccaaccatggcagaccccacc 133
             |||||| |||||||||||||||||
Sbjct: 22882 gctccatccatggcagaccccacc 22905


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,203,984
Number of Sequences: 3902068
Number of extensions: 2203984
Number of successful extensions: 143969
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143530
Number of HSP's gapped (non-prelim): 439
length of query: 203
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 181
effective length of database: 17,147,199,772
effective search space: 3103643158732
effective search space used: 3103643158732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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