ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet51e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY839295.1| Hordeum vulgare thaumatin-like protein TLP5 mRNA,... 533 e-148
2gb|AF442967.1| Triticum aestivum clone WAS-3a thaumatin-like pro... 236 3e-59
3gb|AF355457.1|AF355457 Hordeum vulgare thaumatin-like protein TL... 230 2e-57
4gb|AF016327.1|AF016327 Hordeum vulgare Barperm1 (perm1) mRNA, pa... 226 3e-56
5gb|AF355456.1|AF355456 Hordeum vulgare thaumatin-like protein TL... 222 5e-55
6emb|AJ001268.1|HVPATHPR5 Hordeum vulgare mRNA for basic pathogen... 214 1e-52
7gb|U57787.1|ASU57787 Avena sativa permatin precursor mRNA, compl... 168 6e-39
8gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 98 2e-17
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 98 2e-17
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 98 2e-17
11gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 46 0.060
12ref|XM_549890.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.24
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.24
14dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.24
15dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.24
16dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.24
17gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 0.94
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
19dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
21dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
22dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
23dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
24ref|XM_956567.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.7
25ref|XM_326540.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.7
26gb|AF314590.3| Bradyrhizobium japonicum putative cyclic NTP-bind... 40 3.7
27gb|AC132277.3| Mus musculus BAC clone RP24-344C7 from chromosome... 40 3.7
28gb|BT010058.1| Drosophila melanogaster LD15974 full insert cDNA 40 3.7
29emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 40 3.7
30emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 40 3.7
31emb|AL670006.1|NCG15G9 Neurospora crassa DNA linkage group V cos... 40 3.7
32gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswel... 40 3.7
33gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, comple... 40 3.7
34gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, comple... 40 3.7
35gb|AC023789.8| Mus musculus chromosome 4 clone RP23-43A16, compl... 40 3.7
36ref|NM_168413.1| Drosophila melanogaster CG32062-RB, transcript ... 40 3.7
37ref|NM_168412.1| Drosophila melanogaster CG32062-RD, transcript ... 40 3.7
38dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 3.7
39gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 3.7
40ref|XM_575873.1| PREDICTED: Rattus norvegicus forkhead box D3 (F... 40 3.7
41dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 3.7
42dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
43gb|AF262873.1| Pleurothallis condylata isolate MWC6808 internal ... 40 3.7
44dbj|AB110643.1| Streptomyces thermoviolaceus stxIV, stxI genes f... 40 3.7
45gb|AF194024.1|AF194024 Streptomyces thermocyaneoviolaceus xylana... 40 3.7
46gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37... 40 3.7
47emb|AL773539.18| Mouse DNA sequence from clone RP23-9F18 on chro... 40 3.7
48gb|M64551.1|STMXLNA Streptomyces lividans alpha-L-arabinofuranos... 40 3.7 
>gb|AY839295.1| Hordeum vulgare thaumatin-like protein TLP5 mRNA, complete cds
          Length = 918

 Score =  533 bits (269), Expect = e-148
 Identities = 281/285 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   accatattcacaaacaagaacggcacaagccatggcgttctccggcgtcgtccacctcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13  accatattcacaaacaagaacggcacaagccatggcgttctccggcgtcgtccacctcat 72

                                                                       
Query: 61  cgctctcgtgatcgcggccgctgccgctgccaccgatgcgaccaccataaccgtggtgaa 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  cgctctcgtgatcgcggtcgctgccgctgccaccgatgcgaccaccataaccgtggtgaa 132

                                                                       
Query: 121 ccggtgctcctacacgatatggccaggcgcgctcccaggcggcggcgcgcgtctcgaccc 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 133 ccggtgctcctatacgatatggccaggcgcgctcccaggcggcggcgcgcgtctcgatcc 192

                                                                       
Query: 181 gggccagtcgtggcagctcaacatgcccgcgggcacggcgggcgccagggtgtggccgcg 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gggccagtcgtggcagctcaatatgcccgcgggcacggcgggcgccagggtgtggccgcg 252

                                                        
Query: 241 cacggggtgcaccttcgaccgcagcggccgtggccggtgcatcac 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cacggggtgcaccttcgaccgcagcggccgtggccggtgcatcac 297
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>gb|AF442967.1| Triticum aestivum clone WAS-3a thaumatin-like protein mRNA,
           complete cds
          Length = 925

 Score =  236 bits (119), Expect = 3e-59
 Identities = 173/191 (90%)
 Strand = Plus / Plus

                                                                       
Query: 95  gatgcgaccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctc 154
           |||||| ||||||| ||||| || ||||| |||||||||||| | ||||| |||||||||
Sbjct: 127 gatgcggccaccatcaccgtcgtcaaccgttgctcctacacggtgtggccgggcgcgctc 186

                                                                       
Query: 155 ccaggcggcggcgcgcgtctcgacccgggccagtcgtggcagctcaacatgcccgcgggc 214
           ||||||||||||| ||||||||||||||||||||| |||  ||| ||||||||||| |||
Sbjct: 187 ccaggcggcggcgtgcgtctcgacccgggccagtcttgggcgctgaacatgcccgccggc 246

                                                                       
Query: 215 acggcgggcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggc 274
           || |||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||
Sbjct: 247 accgcgggcgccagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccggggc 306

                      
Query: 275 cggtgcatcac 285
           |||||||||||
Sbjct: 307 cggtgcatcac 317
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>gb|AF355457.1|AF355457 Hordeum vulgare thaumatin-like protein TLP7 mRNA, complete cds
          Length = 967

 Score =  230 bits (116), Expect = 2e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                       
Query: 102 ccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcg 161
           ||||||| ||||| || |||||||||||||||||| | ||||| |||||||||||||| |
Sbjct: 129 ccaccatcaccgtcgtcaaccggtgctcctacacggtgtggccgggcgcgctcccaggtg 188

                                                                       
Query: 162 gcggcgcgcgtctcgacccgggccagtcgtggcagctcaacatgcccgcgggcacggcgg 221
           |||||| |||||||||||| ||||||||||||   || |||||||| || ||||| ||||
Sbjct: 189 gcggcgtgcgtctcgacccaggccagtcgtgggctctgaacatgccggccggcaccgcgg 248

                                                                       
Query: 222 gcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgca 281
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 249 gcgccagggtgtggccgcgcacggggtgcaccttcgacggcagcggccgtggccggtgca 308

               
Query: 282 tcac 285
           ||||
Sbjct: 309 tcac 312
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>gb|AF016327.1|AF016327 Hordeum vulgare Barperm1 (perm1) mRNA, partial cds
          Length = 616

 Score =  226 bits (114), Expect = 3e-56
 Identities = 165/182 (90%)
 Strand = Plus / Plus

                                                                       
Query: 104 accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163
           ||||| ||||| || |||||||||||||||||| | ||||| |||||||||||||| |||
Sbjct: 10  accatcaccgtcgtcaaccggtgctcctacacggtgtggccgggcgcgctcccaggtggc 69

                                                                       
Query: 164 ggcgcgcgtctcgacccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223
           |||| |||||||||||| ||||||||||||   || |||||||| || ||||| ||||||
Sbjct: 70  ggcgtgcgtctcgacccaggccagtcgtgggctctgaacatgccggccggcaccgcgggc 129

                                                                       
Query: 224 gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatc 283
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 130 gccagggtgtggccgcgcacggggtgcaccttcgacggcagcggccgtggccggtgcatc 189

             
Query: 284 ac 285
           ||
Sbjct: 190 ac 191
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>gb|AF355456.1|AF355456 Hordeum vulgare thaumatin-like protein TLP6 mRNA, complete cds
          Length = 921

 Score =  222 bits (112), Expect = 5e-55
 Identities = 166/184 (90%)
 Strand = Plus / Plus

                                                                       
Query: 102 ccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcg 161
           ||||||| ||||| || |||||||||||||||||| | ||||| ||||||||||| || |
Sbjct: 162 ccaccatcaccgtcgtcaaccggtgctcctacacggtgtggccgggcgcgctcccgggtg 221

                                                                       
Query: 162 gcggcgcgcgtctcgacccgggccagtcgtggcagctcaacatgcccgcgggcacggcgg 221
           |||| | |||||||||||| ||||||||||||  ||| ||||||||||||||||| ||||
Sbjct: 222 gcggtgtgcgtctcgacccaggccagtcgtgggcgctgaacatgcccgcgggcaccgcgg 281

                                                                       
Query: 222 gcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgca 281
           |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||
Sbjct: 282 gcgccagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccgcggccggtgca 341

               
Query: 282 tcac 285
           ||||
Sbjct: 342 tcac 345
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>emb|AJ001268.1|HVPATHPR5 Hordeum vulgare mRNA for basic pathogenesis-related protein, PR5
          Length = 867

 Score =  214 bits (108), Expect = 1e-52
 Identities = 165/184 (89%)
 Strand = Plus / Plus

                                                                       
Query: 102 ccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcg 161
           ||||||| ||||| || |||||||||||||||||| | ||||| ||||||||||| || |
Sbjct: 92  ccaccatcaccgtcgtcaaccggtgctcctacacggtgtggccgggcgcgctcccgggtg 151

                                                                       
Query: 162 gcggcgcgcgtctcgacccgggccagtcgtggcagctcaacatgcccgcgggcacggcgg 221
           |||| | |||||||||||| ||||||||||||  ||| |||||||||||||| || ||||
Sbjct: 152 gcggtgtgcgtctcgacccaggccagtcgtgggcgctgaacatgcccgcgggtaccgcgg 211

                                                                       
Query: 222 gcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgca 281
           |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||
Sbjct: 212 gcgccagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccgcggccggtgca 271

               
Query: 282 tcac 285
           ||||
Sbjct: 272 tcac 275
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>gb|U57787.1|ASU57787 Avena sativa permatin precursor mRNA, complete cds
          Length = 846

 Score =  168 bits (85), Expect = 6e-39
 Identities = 157/181 (86%)
 Strand = Plus / Plus

                                                                       
Query: 90  ccaccgatgcgaccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcg 149
           ||||||| ||| ||||||| ||||| || |||  ||||||||||||| | ||||| ||||
Sbjct: 93  ccaccgacgcggccaccatcaccgtcgtcaacaagtgctcctacacggtgtggccgggcg 152

                                                                       
Query: 150 cgctcccaggcggcggcgcgcgtctcgacccgggccagtcgtggcagctcaacatgcccg 209
           ||||||| |||||||||| ||| || ||||||||| ||||||||  |||||||||||| |
Sbjct: 153 cgctcccgggcggcggcgtgcggctggacccgggcaagtcgtgggcgctcaacatgccgg 212

                                                                       
Query: 210 cgggcacggcgggcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggcc 269
           |||| ||   ||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 213 cggggacccggggcgccagggtgtggccgcgcacggggtgcaccttcgacgccagcggcc 272

            
Query: 270 g 270
           |
Sbjct: 273 g 273
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>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09,
              complete sequence
          Length = 159600

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 142/173 (82%)
 Strand = Plus / Minus

                                                                          
Query: 104    accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163
              ||||| ||| |||||||||| ||||| |||||| | ||||| ||||||||||| ||||||
Sbjct: 139469 accatcaccatggtgaaccgctgctcgtacacggtgtggccgggcgcgctcccgggcggc 139410

                                                                          
Query: 164    ggcgcgcgtctcgacccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223
              ||||| || ||||||||||| |||||||||  | ||| | |  |||| |||||  ||| |
Sbjct: 139409 ggcgcccggctcgacccggggcagtcgtggtcgatcagcgtcgccgccggcacaccggcc 139350

                                                                   
Query: 224    gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccg 276
              |||||| | ||||||||||| || ||| |||||||| ||  |||||| |||||
Sbjct: 139349 gccaggatctggccgcgcaccggctgctccttcgacggcgccggccgcggccg 139297



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                          
Query: 104    accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163
              ||||| || ||||||||||| |||  ||||||| | ||||| |||||||| || ||||||
Sbjct: 119121 accatcacggtggtgaaccgctgccgctacacggtgtggccgggcgcgctgcccggcggc 119180

                                                     
Query: 164    ggcgcgcgtctcgacccgggccagtcgtggcagctcaac 202
              |||| ||| |||||||| ||| ||||||||  |||||||
Sbjct: 119181 ggcgtgcggctcgacccaggcaagtcgtggacgctcaac 119219
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 142/173 (82%)
 Strand = Plus / Minus

                                                                            
Query: 104      accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163
                ||||| ||| |||||||||| ||||| |||||| | ||||| ||||||||||| ||||||
Sbjct: 27017083 accatcaccatggtgaaccgctgctcgtacacggtgtggccgggcgcgctcccgggcggc 27017024

                                                                            
Query: 164      ggcgcgcgtctcgacccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223
                ||||| || ||||||||||| |||||||||  | ||| | |  |||| |||||  ||| |
Sbjct: 27017023 ggcgcccggctcgacccggggcagtcgtggtcgatcagcgtcgccgccggcacaccggcc 27016964

                                                                     
Query: 224      gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccg 276
                |||||| | ||||||||||| || ||| |||||||| ||  |||||| |||||
Sbjct: 27016963 gccaggatctggccgcgcaccggctgctccttcgacggcgccggccgcggccg 27016911



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                            
Query: 104      accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163
                ||||| || ||||||||||| |||  ||||||| | ||||| |||||||| || ||||||
Sbjct: 26995927 accatcacggtggtgaaccgctgccgctacacggtgtggccgggcgcgctgcccggcggc 26995986

                                                       
Query: 164      ggcgcgcgtctcgacccgggccagtcgtggcagctcaac 202
                |||| ||| |||||||| ||| ||||||||  |||||||
Sbjct: 26995987 ggcgtgcggctcgacccaggcaagtcgtggacgctcaac 26996025
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 142/173 (82%)
 Strand = Plus / Minus

                                                                            
Query: 104      accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163
                ||||| ||| |||||||||| ||||| |||||| | ||||| ||||||||||| ||||||
Sbjct: 26942672 accatcaccatggtgaaccgctgctcgtacacggtgtggccgggcgcgctcccgggcggc 26942613

                                                                            
Query: 164      ggcgcgcgtctcgacccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223
                ||||| || ||||||||||| |||||||||  | ||| | |  |||| |||||  ||| |
Sbjct: 26942612 ggcgcccggctcgacccggggcagtcgtggtcgatcagcgtcgccgccggcacaccggcc 26942553

                                                                     
Query: 224      gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccg 276
                |||||| | ||||||||||| || ||| |||||||| ||  |||||| |||||
Sbjct: 26942552 gccaggatctggccgcgcaccggctgctccttcgacggcgccggccgcggccg 26942500



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                            
Query: 104      accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163
                ||||| || ||||||||||| |||  ||||||| | ||||| |||||||| || ||||||
Sbjct: 26922324 accatcacggtggtgaaccgctgccgctacacggtgtggccgggcgcgctgcccggcggc 26922383

                                                       
Query: 164      ggcgcgcgtctcgacccgggccagtcgtggcagctcaac 202
                |||| ||| |||||||| ||| ||||||||  |||||||
Sbjct: 26922384 ggcgtgcggctcgacccaggcaagtcgtggacgctcaac 26922422
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 146     ggcgcgctcccaggcggcggcgc 168
               |||||||||||||||||||||||
Sbjct: 3115448 ggcgcgctcccaggcggcggcgc 3115426
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>ref|XM_549890.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1959

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 230 gtgtggccgcgcacggggtgcaccttcgac 259
           |||||| |||||||||| ||||||||||||
Sbjct: 241 gtgtgggcgcgcacgggctgcaccttcgac 270
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 230    gtgtggccgcgcacggggtgcaccttcgac 259
              |||||| |||||||||| ||||||||||||
Sbjct: 728208 gtgtgggcgcgcacgggctgcaccttcgac 728237
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>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OJ1212_B09
          Length = 130728

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 230  gtgtggccgcgcacggggtgcaccttcgac 259
            |||||| |||||||||| ||||||||||||
Sbjct: 5408 gtgtgggcgcgcacgggctgcaccttcgac 5437
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>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0032H19
          Length = 126434

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 230    gtgtggccgcgcacggggtgcaccttcgac 259
              |||||| |||||||||| ||||||||||||
Sbjct: 111952 gtgtgggcgcgcacgggctgcaccttcgac 111981
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 249     gcaccttcgaccgcagcggccg 270
               ||||||||||||||||||||||
Sbjct: 1073034 gcaccttcgaccgcagcggccg 1073055
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 158     ggcggcggcgcgcgtctcgac 178
               |||||||||||||||||||||
Sbjct: 2254101 ggcggcggcgcgcgtctcgac 2254121
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 149      gcgctcccaggcggcggcgcg 169
                |||||||||||||||||||||
Sbjct: 27296214 gcgctcccaggcggcggcgcg 27296234
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 149     gcgctcccaggcggcggcgcg 169
               |||||||||||||||||||||
Sbjct: 6578653 gcgctcccaggcggcggcgcg 6578633



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 72      tcgcggccgctgccgctgccaccg 95
               |||| |||||||||||||||||||
Sbjct: 1958786 tcgccgccgctgccgctgccaccg 1958763
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 71      atcgcggccgctgccgctgccaccg 95
               ||||| |||||||||||||||||||
Sbjct: 4882459 atcgccgccgctgccgctgccaccg 4882483
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>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1151D08
          Length = 152824

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   gcgctcccaggcggcggcgcg 169
             |||||||||||||||||||||
Sbjct: 77323 gcgctcccaggcggcggcgcg 77303
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>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1122_A12
          Length = 149011

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 71    atcgcggccgctgccgctgccaccg 95
             ||||| |||||||||||||||||||
Sbjct: 41713 atcgccgccgctgccgctgccaccg 41737
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>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056D04
          Length = 158118

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 71    atcgcggccgctgccgctgccaccg 95
             ||||| |||||||||||||||||||
Sbjct: 87253 atcgccgccgctgccgctgccaccg 87277
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>ref|XM_956567.1| Neurospora crassa OR74A hypothetical protein (NCU01048.1) partial
           mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  gccgctgccgctgccaccga 96
           ||||||||||||||||||||
Sbjct: 91  gccgctgccgctgccaccga 110
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>ref|XM_326540.1| Neurospora crassa OR74A hypothetical protein (NCU01048.1) partial
           mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  gccgctgccgctgccaccga 96
           ||||||||||||||||||||
Sbjct: 91  gccgctgccgctgccaccga 110
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>gb|AF314590.3| Bradyrhizobium japonicum putative cyclic NTP-binding protein gene,
            partial cds; LuxA-like protein, MDO-like protein, and
            AraC-like protein genes, complete cds; nap operon,
            complete sequence; exodeoxyribosylnuclease EdrN (edrN)
            genes, complete cds; and putative sensor protein gene,
            partial cds
          Length = 11020

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   gatcgcggccgctgccgctg 89
            ||||||||||||||||||||
Sbjct: 5455 gatcgcggccgctgccgctg 5474
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>gb|AC132277.3| Mus musculus BAC clone RP24-344C7 from chromosome 9, complete sequence
          Length = 175852

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      ccatattcacaaacaagaac 21
              ||||||||||||||||||||
Sbjct: 129888 ccatattcacaaacaagaac 129907
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>gb|BT010058.1| Drosophila melanogaster LD15974 full insert cDNA
          Length = 3457

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  ggccgctgccgctgccaccg 95
           ||||||||||||||||||||
Sbjct: 729 ggccgctgccgctgccaccg 710
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    gccagggtgtggccgcgcac 243
              ||||||||||||||||||||
Sbjct: 211572 gccagggtgtggccgcgcac 211591
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    ccagggtgtggccgcgcacg 244
              ||||||||||||||||||||
Sbjct: 123892 ccagggtgtggccgcgcacg 123911
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>emb|AL670006.1|NCG15G9 Neurospora crassa DNA linkage group V cosmid contig G15G9
          Length = 92230

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    gccgctgccgctgccaccga 96
             ||||||||||||||||||||
Sbjct: 26482 gccgctgccgctgccaccga 26463
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>gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 174616

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    ggccgctgccgctgccaccg 95
             ||||||||||||||||||||
Sbjct: 75816 ggccgctgccgctgccaccg 75797
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>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence
          Length = 168794

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    tcgcggccgctgccgctgccaccg 95
             |||| |||||||||||||||||||
Sbjct: 19021 tcgccgccgctgccgctgccaccg 18998
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>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence
          Length = 118183

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    tcgcggccgctgccgctgccaccg 95
             |||| |||||||||||||||||||
Sbjct: 79003 tcgccgccgctgccgctgccaccg 78980
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>gb|AC023789.8| Mus musculus chromosome 4 clone RP23-43A16, complete sequence
          Length = 146120

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     tcgcggccgctgccgctgccaccg 95
              |||| |||||||||||||||||||
Sbjct: 129401 tcgctgccgctgccgctgccaccg 129378
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>ref|NM_168413.1| Drosophila melanogaster CG32062-RB, transcript variant B (CG32062),
           mRNA
          Length = 6200

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  ggccgctgccgctgccaccg 95
           ||||||||||||||||||||
Sbjct: 740 ggccgctgccgctgccaccg 721
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>ref|NM_168412.1| Drosophila melanogaster CG32062-RD, transcript variant D (CG32062),
           mRNA
          Length = 5993

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  ggccgctgccgctgccaccg 95
           ||||||||||||||||||||
Sbjct: 740 ggccgctgccgctgccaccg 721
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     cgcgcgtctcgacccgggcc 185
               ||||||||||||||||||||
Sbjct: 2756908 cgcgcgtctcgacccgggcc 2756927
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 158     ggcggcggcgcgcgtctcga 177
               ||||||||||||||||||||
Sbjct: 1572799 ggcggcggcgcgcgtctcga 1572780
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>ref|XM_575873.1| PREDICTED: Rattus norvegicus forkhead box D3 (Foxd3), mRNA
          Length = 1737

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  ccgcgggcacggcgggcgcc 226
            ||||||||||||||||||||
Sbjct: 1518 ccgcgggcacggcgggcgcc 1537
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 70      gatcgcggccgctgccgctg 89
               ||||||||||||||||||||
Sbjct: 7752634 gatcgcggccgctgccgctg 7752653
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>dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0025H18
          Length = 176201

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     tcgcggccgctgccgctgccaccg 95
              |||| |||||||||||||||||||
Sbjct: 107954 tcgccgccgctgccgctgccaccg 107931
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>gb|AF262873.1| Pleurothallis condylata isolate MWC6808 internal transcribed spacer
           1, 5.8S ribosomal RNA gene, and internal transcribed
           spacer 2, partial sequence
          Length = 762

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 tgcccgcgggcacggcgggc 223
           ||||||||||||||||||||
Sbjct: 571 tgcccgcgggcacggcgggc 590
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>dbj|AB110643.1| Streptomyces thermoviolaceus stxIV, stxI genes for
            alpha-L-arabinofuranosidase, xylanase I complete cds
          Length = 3642

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  gccagggtgtggccgcgcac 243
            ||||||||||||||||||||
Sbjct: 2572 gccagggtgtggccgcgcac 2553
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>gb|AF194024.1|AF194024 Streptomyces thermocyaneoviolaceus xylanase A precursor (xynA)
           gene, complete cds
          Length = 1918

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 gccagggtgtggccgcgcac 243
           ||||||||||||||||||||
Sbjct: 848 gccagggtgtggccgcgcac 829
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>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete
              sequence
          Length = 244140

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     ggccgctgccgctgccaccg 95
              ||||||||||||||||||||
Sbjct: 205585 ggccgctgccgctgccaccg 205566
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>emb|AL773539.18| Mouse DNA sequence from clone RP23-9F18 on chromosome 4, complete
             sequence
          Length = 182206

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    tcgcggccgctgccgctgccaccg 95
             |||| |||||||||||||||||||
Sbjct: 16416 tcgctgccgctgccgctgccaccg 16439
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>gb|M64551.1|STMXLNA Streptomyces lividans alpha-L-arabinofuranosidase precursor (abfB)
            and xylanase A precursor (xlnA) genes, complete cds
          Length = 4501

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  gccagggtgtggccgcgcac 243
            ||||||||||||||||||||
Sbjct: 2683 gccagggtgtggccgcgcac 2664


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,717,495
Number of Sequences: 3902068
Number of extensions: 1717495
Number of successful extensions: 45565
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44718
Number of HSP's gapped (non-prelim): 844
length of query: 285
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 263
effective length of database: 17,147,199,772
effective search space: 4509713540036
effective search space used: 4509713540036
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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