| Clone Name | baet51e05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester... | 61 | 7e-10 | 2 | FANCJ_CHICK (Q3YK19) Fanconi anemia group J protein homolog (EC ... | 28 | 7.0 |
|---|
>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Protein Xantha-l) Length = 417 Score = 61.2 bits (147), Expect = 7e-10 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = +3 Query: 51 MASAMELSLLNPAMHHYGIAAKTASHLPV 137 MASAMELSLLNPAMHHYGIAAKTASHLPV Sbjct: 1 MASAMELSLLNPAMHHYGIAAKTASHLPV 29
>FANCJ_CHICK (Q3YK19) Fanconi anemia group J protein homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase BRIP1) (Protein FACJ) Length = 1252 Score = 28.1 bits (61), Expect = 7.0 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Frame = +2 Query: 5 SSLPFRAVCHSRSSED----GVRHGA 70 +SLP R VCHSRS G HGA Sbjct: 86 ASLPCRCVCHSRSESSEATAGASHGA 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,846,955 Number of Sequences: 219361 Number of extensions: 300900 Number of successful extensions: 1137 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1073 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1136 length of database: 80,573,946 effective HSP length: 21 effective length of database: 75,967,365 effective search space used: 1823216760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)