ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet51d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit... 482 e-133
2gb|AY103687.1| Zea mays PCO106710 mRNA sequence 60 4e-06
3ref|NM_184976.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-04
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 2e-04
5gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno... 54 2e-04
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
7dbj|AK069791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
8dbj|AK060493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
9dbj|AK059890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
10gb|AF093634.1|AF093634 Oryza sativa photosystem-1 F subunit prec... 54 2e-04
11emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4,... 46 0.058
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.058
13ref|XM_429173.1| PREDICTED: Gallus gallus similar to TRANSCRIPTI... 44 0.23
14emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 44 0.23
15ref|XM_466738.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.90
16gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 0.90
17ref|XM_987300.1| PREDICTED: Mus musculus hypothetical protein LO... 42 0.90
18ref|XM_001000679.1| PREDICTED: Mus musculus hypothetical protein... 42 0.90
19gb|U05681.1|AH006679S2 Homo sapiens B-cell leukemia/lymphoma 3 (... 42 0.90
20gb|AC092066.4| Homo sapiens chromosome 19 clone CTB-171A8, compl... 42 0.90
21dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
23gb|AC008195.6|AC008195 Drosophila melanogaster, chromosome 3R, r... 42 0.90
24gb|AC008091.6|AC008091 Drosophila melanogaster, chromosome 3R, r... 42 0.90
25gb|AC153911.5| Mus musculus 10 BAC RP23-182J19 (Roswell Park Can... 42 0.90
26dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
27dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
28gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74... 42 0.90
29gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 0.90
30gb|AC153021.2| Mus musculus 10 BAC RP23-37G3 (Roswell Park Cance... 42 0.90
31ref|NM_104338.2| Arabidopsis thaliana ATP binding / kinase/ prot... 40 3.6
32ref|XM_635454.1| Dictyostelium discoideum hypothetical protein (... 40 3.6
33ref|XM_507263.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.6
34ref|XM_482844.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
35ref|XM_415806.1| PREDICTED: Gallus gallus similar to hypothetica... 40 3.6
36gb|DQ124423.1| Zea mays retinoblastoma-related 3 (rbr3) mRNA, co... 40 3.6
37ref|XM_814502.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 3.6
38emb|BX059491.1|CNS09I2F Single read from an extremity of a full-... 40 3.6
39emb|BX058998.1|CNS09HOQ Single read from an extremity of a full-... 40 3.6
40emb|BX047784.1|CNS09918 Single read from an extremity of a full-... 40 3.6
41emb|BX021678.1|CNS08OW2 Single read from an extremity of a full-... 40 3.6
42emb|BX011126.1|CNS08GQY Single read from an extremity of a full-... 40 3.6
43emb|BX009431.1|CNS08FFV Single read from an extremity of a full-... 40 3.6
44emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 3.6
45emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 3.6
46emb|AJ130734.1|HSA130734 Homo sapiens xce gene, exons 1-18 40 3.6
47gb|AY128918.1| Arabidopsis thaliana unknown protein (At1g54610) ... 40 3.6
48gb|AY651069.1| Yarrowia lipolytica fructose-1,6-bisphosphatase (... 40 3.6
49gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 3.6
50gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis tha... 40 3.6
51gb|AF370510.1|AF370510 Arabidopsis thaliana Unknown protein (T22... 40 3.6
52gb|AF307337.1|AF307337 Homo sapiens ALPP, ALPPL2, ALPI, XCE, CHR... 40 3.6
53dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
54gb|AC092165.4| Homo sapiens BAC clone RP11-753F4 from 2, complet... 40 3.6
55gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.6
56dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 3.6
57dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
58dbj|AK119564.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
59emb|AJ330056.1|HSA330056 Homo sapiens genomic sequence surroundi... 40 3.6
60dbj|AK071698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
61gb|AF129485.1| Oryza sativa HAK4 (HAK4) mRNA, partial cds 40 3.6
62emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 3.6
63gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 3.6 
>gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit precursor mRNA,
           complete cds
          Length = 990

 Score =  482 bits (243), Expect = e-133
 Identities = 249/251 (99%)
 Strand = Plus / Plus

                                                                       
Query: 19  cccctccacacgcccgcccgcgcgcgccacggacgcagcaatggccgccctcgccgcctc 78
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  cccctccacacgcccgcccgcgcgcgccacggacgcagcaatggccgccctcgccgcctc 69

                                                                       
Query: 79  catcgccacctccacggcgttcgccgcgaagccgcgcctgtcccgcccgccggcgcgcct 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  catcgccacctccacggcgttcgccgcgaagccgcgcctgtcccgcccgccggcgcgcct 129

                                                                       
Query: 139 ctccgtctcctgctccgcgtccagcggcgacaacaacaacagcaccgccaccccctcgct 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ctccgtctcctgctccgcgtccagcggcgacaacaacaacagcaccgccaccccctcgct 189

                                                                       
Query: 199 ctccgcttccatcaagaccttctcggccgcgctggcgctctcctccgtgctcctctcctc 258
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ctccgcctccatcaagaccttctcggccgcgctggcgctctcctccgtgctcctctcctc 249

                      
Query: 259 ggccgtcacct 269
           ||||| |||||
Sbjct: 250 ggccgccacct 260
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>gb|AY103687.1| Zea mays PCO106710 mRNA sequence
          Length = 1242

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 212 aagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgtcacct 269
           ||||| ||||||||||||||||| || || || ||||| ||||||||||||| |||||
Sbjct: 241 aagacgttctcggccgcgctggctctgtcgtcggtgcttctctcctcggccgccacct 298



 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 59  atggccgccctcgccgcctcc 79
           |||||||||||||||||||||
Sbjct: 100 atggccgccctcgccgcctcc 120
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>ref|NM_184976.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 211 caagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggc 261
           |||||| ||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct: 225 caagacgttctccgcggcgctggcgctgtcctcggtgctgctctcctcggc 275



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 53 gcagcaatggccgccctcgccgcc 76
          ||||||||||||||||||||||||
Sbjct: 64 gcagcaatggccgccctcgccgcc 87
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 211      caagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggc 261
                |||||| ||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct: 31970027 caagacgttctccgcggcgctggcgctgtcctcggtgctgctctcctcggc 31969977



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 53       gcagcaatggccgccctcgccgcc 76
                ||||||||||||||||||||||||
Sbjct: 31970188 gcagcaatggccgccctcgccgcc 31970165
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>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 211   caagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggc 261
             |||||| ||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct: 61979 caagacgttctccgcggcgctggcgctgtcctcggtgctgctctcctcggc 61929



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 53    gcagcaatggccgccctcgccgcc 76
             ||||||||||||||||||||||||
Sbjct: 62140 gcagcaatggccgccctcgccgcc 62117
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 211      caagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggc 261
                |||||| ||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct: 32060539 caagacgttctccgcggcgctggcgctgtcctcggtgctgctctcctcggc 32060489



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 53       gcagcaatggccgccctcgccgcc 76
                ||||||||||||||||||||||||
Sbjct: 32060700 gcagcaatggccgccctcgccgcc 32060677
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>dbj|AK069791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031N02, full
           insert sequence
          Length = 967

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 211 caagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggc 261
           |||||| ||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct: 222 caagacgttctccgcggcgctggcgctgtcctcggtgctgctctcctcggc 272



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 53 gcagcaatggccgccctcgccgcc 76
          ||||||||||||||||||||||||
Sbjct: 61 gcagcaatggccgccctcgccgcc 84
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>dbj|AK060493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-D02, full
           insert sequence
          Length = 997

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 211 caagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggc 261
           |||||| ||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct: 224 caagacgttctccgcggcgctggcgctgtcctcggtgctgctctcctcggc 274



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 53 gcagcaatggccgccctcgccgcc 76
          ||||||||||||||||||||||||
Sbjct: 63 gcagcaatggccgccctcgccgcc 86
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>dbj|AK059890.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C12, full
           insert sequence
          Length = 990

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 211 caagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggc 261
           |||||| ||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct: 212 caagacgttctccgcggcgctggcgctgtcctcggtgctgctctcctcggc 262



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 53 gcagcaatggccgccctcgccgcc 76
          ||||||||||||||||||||||||
Sbjct: 51 gcagcaatggccgccctcgccgcc 74
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>gb|AF093634.1|AF093634 Oryza sativa photosystem-1 F subunit precursor (PSI-F) mRNA,
           complete cds
          Length = 996

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 211 caagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggc 261
           |||||| ||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct: 205 caagacgttctccgcggcgctggcgctgtcctcggtgctgctctcctcggc 255



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 53 gcagcaatggccgccctcgccgcc 76
          ||||||||||||||||||||||||
Sbjct: 44 gcagcaatggccgccctcgccgcc 67
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>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14,
             complete sequence
          Length = 175698

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 62    gccgccctcgccgcctccatcgccacc 88
             |||||||||||||||||| ||||||||
Sbjct: 99872 gccgccctcgccgcctccgtcgccacc 99898
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 62       gccgccctcgccgcctccatcgccacc 88
                |||||||||||||||||| ||||||||
Sbjct: 22496117 gccgccctcgccgcctccgtcgccacc 22496143
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>ref|XM_429173.1| PREDICTED: Gallus gallus similar to TRANSCRIPTION FACTOR JUN-D
           (LOC431621), mRNA
          Length = 657

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 151 ctccgcgtccagcggcgacaac 172
           ||||||||||||||||||||||
Sbjct: 300 ctccgcgtccagcggcgacaac 279
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 100    cgccgcgaagccgcgcctgtcc 121
              ||||||||||||||||||||||
Sbjct: 286347 cgccgcgaagccgcgcctgtcc 286326
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>ref|XM_466738.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 621

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 67  cctcgccgcctccatcgccacctcc 91
           |||||||||||||||| ||||||||
Sbjct: 329 cctcgccgcctccatccccacctcc 305
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 223     ggccgcgctggcgctctcctc 243
               |||||||||||||||||||||
Sbjct: 1294489 ggccgcgctggcgctctcctc 1294469
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>ref|XM_987300.1| PREDICTED: Mus musculus hypothetical protein LOC671473 (LOC671473),
           mRNA
          Length = 348

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 29  cgcccgcccgcgcgcgccacg 49
           |||||||||||||||||||||
Sbjct: 164 cgcccgcccgcgcgcgccacg 184
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>ref|XM_001000679.1| PREDICTED: Mus musculus hypothetical protein LOC668287 (LOC668287),
           mRNA
          Length = 780

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 29  cgcccgcccgcgcgcgccacg 49
           |||||||||||||||||||||
Sbjct: 163 cgcccgcccgcgcgcgccacg 183
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>gb|U05681.1|AH006679S2 Homo sapiens B-cell leukemia/lymphoma 3 (BCL) gene, exons 3, 4, 5, 6,
            7, and 8, 9 and partial cds
          Length = 4776

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  ctccgtctcctgctccgcgtccagc 163
            ||||| |||||||||||||||||||
Sbjct: 1844 ctccggctcctgctccgcgtccagc 1868
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>gb|AC092066.4| Homo sapiens chromosome 19 clone CTB-171A8, complete sequence
          Length = 137411

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 139   ctccgtctcctgctccgcgtccagc 163
             ||||| |||||||||||||||||||
Sbjct: 94491 ctccggctcctgctccgcgtccagc 94515
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 67       cctcgccgcctccatcgccacctcc 91
                |||||||||||||||| ||||||||
Sbjct: 24509265 cctcgccgcctccatccccacctcc 24509241
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 67       cctcgccgcctccatcgccacctcc 91
                |||||||||||||||| ||||||||
Sbjct: 24352130 cctcgccgcctccatccccacctcc 24352106
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>gb|AC008195.6|AC008195 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone
              BACR42I20, complete sequence
          Length = 164944

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    ccagcggcgacaacaacaaca 179
              |||||||||||||||||||||
Sbjct: 153319 ccagcggcgacaacaacaaca 153299
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>gb|AC008091.6|AC008091 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone
             BACR08K01, complete sequence
          Length = 175781

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 159   ccagcggcgacaacaacaaca 179
             |||||||||||||||||||||
Sbjct: 39019 ccagcggcgacaacaacaaca 38999
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>gb|AC153911.5| Mus musculus 10 BAC RP23-182J19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 219859

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    cgcccgcccgcgcgcgccacg 49
             |||||||||||||||||||||
Sbjct: 54304 cgcccgcccgcgcgcgccacg 54284
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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0012B02
          Length = 149807

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 67     cctcgccgcctccatcgccacctcc 91
              |||||||||||||||| ||||||||
Sbjct: 120738 cctcgccgcctccatccccacctcc 120714
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>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0407A09
          Length = 103788

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 67    cctcgccgcctccatcgccacctcc 91
             |||||||||||||||| ||||||||
Sbjct: 81668 cctcgccgcctccatccccacctcc 81644
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>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the complete
              sequence
          Length = 235928

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    ccagcggcgacaacaacaaca 179
              |||||||||||||||||||||
Sbjct: 179327 ccagcggcgacaacaacaaca 179307
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 113    cgcctgtcccgcccgccggcgcgcc 137
              |||||||||||||||||||| ||||
Sbjct: 247684 cgcctgtcccgcccgccggctcgcc 247660
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>gb|AC153021.2| Mus musculus 10 BAC RP23-37G3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187132

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    cgcccgcccgcgcgcgccacg 49
             |||||||||||||||||||||
Sbjct: 58278 cgcccgcccgcgcgcgccacg 58298
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>ref|NM_104338.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
           serine/threonine kinase/ protein-tyrosine kinase
           AT1G54610 mRNA, complete cds
          Length = 2071

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 gcggcgacaacaacaacagc 181
           ||||||||||||||||||||
Sbjct: 177 gcggcgacaacaacaacagc 196
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>ref|XM_635454.1| Dictyostelium discoideum hypothetical protein (DDB0220008), partial
            mRNA
          Length = 3651

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  gcgacaacaacaacagcacc 184
            ||||||||||||||||||||
Sbjct: 3064 gcgacaacaacaacagcacc 3083
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>ref|XM_507263.1| PREDICTED Oryza sativa (japonica cultivar-group), P0104B02.21 mRNA
          Length = 2579

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ggccgccctcgccgcctcca 80
            ||||||||||||||||||||
Sbjct: 1954 ggccgccctcgccgcctcca 1935
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>ref|XM_482844.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2335

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ggccgccctcgccgcctcca 80
            ||||||||||||||||||||
Sbjct: 1955 ggccgccctcgccgcctcca 1936
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>ref|XM_415806.1| PREDICTED: Gallus gallus similar to hypothetical protein
           (LOC417560), mRNA
          Length = 6702

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 gcccgccggcgcgcctctcc 142
           ||||||||||||||||||||
Sbjct: 363 gcccgccggcgcgcctctcc 382
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>gb|DQ124423.1| Zea mays retinoblastoma-related 3 (rbr3) mRNA, complete cds
          Length = 3856

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 198  tctccgcttccatcaagaccttct 221
            ||||| ||||||||||||||||||
Sbjct: 1809 tctccccttccatcaagaccttct 1832
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>ref|XM_814502.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510303.30) partial mRNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 gctggcgctctcctccgtgc 248
           ||||||||||||||||||||
Sbjct: 135 gctggcgctctcctccgtgc 116
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>emb|BX059491.1|CNS09I2F Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC4BD10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 983

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 gcgacaacaacaacagcacc 184
           ||||||||||||||||||||
Sbjct: 179 gcgacaacaacaacagcacc 198
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>emb|BX058998.1|CNS09HOQ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC39CF05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 813

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 gcgacaacaacaacagcacc 184
           ||||||||||||||||||||
Sbjct: 112 gcgacaacaacaacagcacc 131
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>emb|BX047784.1|CNS09918 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC22CB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 928

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 gcgacaacaacaacagcacc 184
           ||||||||||||||||||||
Sbjct: 125 gcgacaacaacaacagcacc 144
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>emb|BX021678.1|CNS08OW2 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA32AF05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 309

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 gcgacaacaacaacagcacc 184
           ||||||||||||||||||||
Sbjct: 48  gcgacaacaacaacagcacc 67
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>emb|BX011126.1|CNS08GQY Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA17DB05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 964

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 gcgacaacaacaacagcacc 184
           ||||||||||||||||||||
Sbjct: 202 gcgacaacaacaacagcacc 221
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>emb|BX009431.1|CNS08FFV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA15BB12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 610

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 gcgacaacaacaacagcacc 184
           ||||||||||||||||||||
Sbjct: 220 gcgacaacaacaacagcacc 239
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    cacgcccgcccgcgcgcgcc 46
             ||||||||||||||||||||
Sbjct: 95169 cacgcccgcccgcgcgcgcc 95150
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    cacgcccgcccgcgcgcgcc 46
             ||||||||||||||||||||
Sbjct: 18212 cacgcccgcccgcgcgcgcc 18193
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>emb|AJ130734.1|HSA130734 Homo sapiens xce gene, exons 1-18
          Length = 10604

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  gcccgccggcgcgcctctcc 142
            ||||||||||||||||||||
Sbjct: 4879 gcccgccggcgcgcctctcc 4860
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>gb|AY128918.1| Arabidopsis thaliana unknown protein (At1g54610) mRNA, complete cds
          Length = 1786

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 gcggcgacaacaacaacagc 181
           ||||||||||||||||||||
Sbjct: 25  gcggcgacaacaacaacagc 44
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>gb|AY651069.1| Yarrowia lipolytica fructose-1,6-bisphosphatase (FBP1) gene,
           promoter region and 5' UTR
          Length = 1568

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  tcgccgcctccatcgccacctcca 92
           ||||| ||||||||||||||||||
Sbjct: 915 tcgccacctccatcgccacctcca 938
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    gccgccctcgccgcctccatcgcc 85
             |||||||||||||| |||||||||
Sbjct: 34716 gccgccctcgccgcttccatcgcc 34739
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>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 87768

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   gcggcgacaacaacaacagc 181
             ||||||||||||||||||||
Sbjct: 25390 gcggcgacaacaacaacagc 25371
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>gb|AF370510.1|AF370510 Arabidopsis thaliana Unknown protein (T22H22.5) mRNA, complete cds
          Length = 2041

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 gcggcgacaacaacaacagc 181
           ||||||||||||||||||||
Sbjct: 181 gcggcgacaacaacaacagc 200
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>gb|AF307337.1|AF307337 Homo sapiens ALPP, ALPPL2, ALPI, XCE, CHRND, and CHRNG genes, complete
              sequence
          Length = 210301

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    gcccgccggcgcgcctctcc 142
              ||||||||||||||||||||
Sbjct: 146488 gcccgccggcgcgcctctcc 146507
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 61       ggccgccctcgccgcctcca 80
                ||||||||||||||||||||
Sbjct: 22900421 ggccgccctcgccgcctcca 22900402
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>gb|AC092165.4| Homo sapiens BAC clone RP11-753F4 from 2, complete sequence
          Length = 100020

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   gcccgccggcgcgcctctcc 142
             ||||||||||||||||||||
Sbjct: 14654 gcccgccggcgcgcctctcc 14673
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 62      gccgccctcgccgcctccatcgcc 85
               ||||||||||| ||||||||||||
Sbjct: 1192131 gccgccctcgcggcctccatcgcc 1192108
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 174     acaacagcaccgccaccccc 193
               ||||||||||||||||||||
Sbjct: 2183011 acaacagcaccgccaccccc 2182992
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>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0104B02
          Length = 169588

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    ggccgccctcgccgcctcca 80
             ||||||||||||||||||||
Sbjct: 74259 ggccgccctcgccgcctcca 74240
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>dbj|AK119564.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-A03, full
            insert sequence
          Length = 2579

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ggccgccctcgccgcctcca 80
            ||||||||||||||||||||
Sbjct: 1954 ggccgccctcgccgcctcca 1935
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>emb|AJ330056.1|HSA330056 Homo sapiens genomic sequence surrounding NotI site, clone NR1-WB4R
          Length = 712

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 gcccgccggcgcgcctctcc 142
           ||||||||||||||||||||
Sbjct: 478 gcccgccggcgcgcctctcc 459
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>dbj|AK071698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108L13, full
            insert sequence
          Length = 2336

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ggccgccctcgccgcctcca 80
            ||||||||||||||||||||
Sbjct: 1955 ggccgccctcgccgcctcca 1936
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>gb|AF129485.1| Oryza sativa HAK4 (HAK4) mRNA, partial cds
          Length = 2321

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ggccgccctcgccgcctcca 80
            ||||||||||||||||||||
Sbjct: 1674 ggccgccctcgccgcctcca 1655
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 69      tcgccgcctccatcgccacctcca 92
               ||||| ||||||||||||||||||
Sbjct: 1629996 tcgccacctccatcgccacctcca 1630019
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 69      tcgccgcctccatcgccacctcca 92
               |||||| |||||||||||||||||
Sbjct: 1955600 tcgccgactccatcgccacctcca 1955577


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,741,249
Number of Sequences: 3902068
Number of extensions: 2741249
Number of successful extensions: 80815
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79214
Number of HSP's gapped (non-prelim): 1601
length of query: 273
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 251
effective length of database: 17,147,199,772
effective search space: 4303947142772
effective search space used: 4303947142772
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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