>M030_ARATH (P93276) Hypothetical mitochondrial protein AtMg00030 (ORF107a)|
          Length = 107

 Score = 72.8 bits (177), Expect(2) = 4e-24
 Identities = 33/39 (84%), Positives = 33/39 (84%)
 Frame = -2

Query: 170 MFQFAKFEKSKERRLATELGYGFPIGDPWITDSYLPMAF 54
           MFQFAKF KSKERRLATELGYGFPIGDPWITD   P  F
Sbjct: 1   MFQFAKFSKSKERRLATELGYGFPIGDPWITDGISPWPF 39



 Score = 56.2 bits (134), Expect(2) = 4e-24
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -3

Query: 70  ISPWPFASESVLPSQCPGIHPMH 2
           ISPWPFASESVLPSQCPGIHPMH
Sbjct: 34  ISPWPFASESVLPSQCPGIHPMH 56

>KPPR_XANFL (P23015) Phosphoribulokinase (EC 2.7.1.19) (Phosphopentokinase)|
           (PRKase) (PRK)
          Length = 291

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
 Frame = -1

Query: 189 PSFSYSDVSVR*V*KVQRAQTSHGAWIRFPDRRSMDHRFISPHG------LSPLKASFLL 28
           P F+ +D++ + V  V  +      WI  PD   +  RF  PHG      LS +  SF+ 
Sbjct: 197 PQFTETDINFQRVPTVDTSNPFVARWIPTPDESMVVIRFRDPHGIDFPYLLSMIHNSFMS 256

Query: 27  NARASI 10
            A + +
Sbjct: 257 RANSIV 262

>CED4_CAEEL (P30429) Cell death protein 4|
          Length = 571

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 387 LRPKTVADFVQLRRARYGNFSNYACC 310
           +RP+    F+QL +  Y +  N+ACC
Sbjct: 546 IRPEDFPKFMQLHQKFYDSLKNFACC 571

>RBNS5_MOUSE (Q80Y56) Rabenosyn-5 (FYVE finger-containing Rab5 effector protein|
           rabenosyn-5) (Zinc finger FYVE domain-containing protein
           20)
          Length = 783

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/60 (33%), Positives = 24/60 (40%)
 Frame = -2

Query: 185 PLATQMFQFAKFEKSKERRLATELGYGFPIGDPWITDSYLPMAFRL*KRPSFSMPGHPSN 6
           P A    ++  FE+  E     ELG G P  DP   DS  P  F     P  + P  P N
Sbjct: 652 PPAAVTKEYNPFEEDAEEEEVAELGAGNPFTDP---DSPAPNPFDEDDGPRPASPAAPGN 708

>ANXA4_RAT (P55260) Annexin A4 (Annexin IV) (Lipocortin IV) (36 kDa zymogen|
           granule membrane-associated protein) (ZAP36)
          Length = 318

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 387 LRPKTVADFVQLRRARYGNFSNYACCLLVFPSSNPQQI 274
           + P  + D  +LRRA  G  ++  C + +  S NP++I
Sbjct: 83  MTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEI 120

>FPG_FRATT (Q5NGY3) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 273

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 120 GAWIRFPDRRSMDHRFISPHGLSPLKASF 34
           G W+   +   ++HR +  HG+ PL A F
Sbjct: 114 GYWLVNTNHTPLEHRVLVSHGVEPLTADF 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,134,169
Number of Sequences: 219361
Number of extensions: 1021089
Number of successful extensions: 2340
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2337
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)