ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet51a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207... 88 1e-14
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 88 1e-14
3dbj|AK068260.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 1e-14
4dbj|AK060983.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 1e-14
5emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 88 1e-14
6ref|XM_474460.1| Oryza sativa (japonica cultivar-group), predic... 86 5e-14
7gb|BT017703.1| Zea mays clone EL01N0445G07.c mRNA sequence 60 3e-06
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-06
9dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-06
10dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-06
11dbj|AK109816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 3e-06
12dbj|AK109748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 3e-06
13dbj|AK073500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 3e-06
14ref|XM_550351.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.003
16dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.003
17dbj|AK106071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
18dbj|AK073824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
19dbj|AK060328.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
20dbj|AK058295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
21ref|XM_472540.1| Oryza sativa (japonica cultivar-group), predic... 48 0.011
22emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 48 0.011
23dbj|AK106337.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.011
24dbj|AK072050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.011
25gb|AY108252.1| Zea mays PCO090236 mRNA sequence 48 0.011
26ref|XM_475885.1| Oryza sativa (japonica cultivar-group), predic... 46 0.045
27gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.045
28dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.045
29emb|BX545855.16| Zebrafish DNA sequence from clone CH211-212N6 i... 44 0.18
30ref|XM_450682.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.70
31emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on ch... 42 0.70
32dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.70
33dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.70
34dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.70
35dbj|AK105479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.70
36gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.8
37gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.8
38emb|CR376761.19| Zebrafish DNA sequence from clone DKEY-6F24 in ... 40 2.8
39emb|AL353579.17| Human DNA sequence from clone RP3-355M6 on chro... 40 2.8
40gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 2.8
41emb|BX119976.8| Zebrafish DNA sequence from clone CH211-196F5 in... 40 2.8
42gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 2.8
43gb|DQ067482.1| Tarsius syrichta msh homeobox 1-like protein (MSX... 40 2.8
44gb|AF386792.1|AF386792 Homo sapiens proto-oncogene PIM1 (PIM1) g... 40 2.8
45gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, co... 40 2.8
46dbj|AK037001.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 2.8
47dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
49emb|BX829387.1|CNS09YYF Arabidopsis thaliana Full-length cDNA Co... 40 2.8
50gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.8
51gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome ... 40 2.8
52gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 2.8
53dbj|AK069996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.8
54gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 2.8
55gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.8
56emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chr... 40 2.8
57gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 2.8
58gb|M27903.1|HUMPIM1A Human pim-1 proto-oncogene gene, complete cds 40 2.8
59emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chro... 40 2.8
60emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chro... 40 2.8
61gb|M34228.1|HUMPIM1B Human protein kinase (Pim-1) promoter DNA 40 2.8 
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                         
Query: 83    gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 142
             |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| ||
Sbjct: 48845 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 48786

                 
Query: 143   cccg 146
             ||||
Sbjct: 48785 cccg 48782
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                            
Query: 83       gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 142
                |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| ||
Sbjct: 35312965 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 35313024

                    
Query: 143      cccg 146
                ||||
Sbjct: 35313025 cccg 35313028



 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 85       tgcacgccaagacggactcggaggtgac 112
                ||||||| ||||||||||||||||||||
Sbjct: 21359356 tgcacgcgaagacggactcggaggtgac 21359383
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>dbj|AK068260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147H21, full
           insert sequence
          Length = 1291

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                       
Query: 83  gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 142
           |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| ||
Sbjct: 139 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 198

               
Query: 143 cccg 146
           ||||
Sbjct: 199 cccg 202
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>dbj|AK060983.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A12, full
           insert sequence
          Length = 1347

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                       
Query: 83  gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 142
           |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| ||
Sbjct: 124 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 183

               
Query: 143 cccg 146
           ||||
Sbjct: 184 cccg 187
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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
              complete sequence
          Length = 173770

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                          
Query: 83     gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 142
              |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| ||
Sbjct: 108810 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 108869

                  
Query: 143    cccg 146
              ||||
Sbjct: 108870 cccg 108873
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>ref|XM_474460.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 948

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                       
Query: 84  atgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctcc 143
           ||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| |||
Sbjct: 1   atgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtcc 60

              
Query: 144 ccg 146
           |||
Sbjct: 61  ccg 63
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>gb|BT017703.1| Zea mays clone EL01N0445G07.c mRNA sequence
          Length = 1208

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 86  gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctcccc 145
           |||||||||||||||||| || ||||| ||||||||| | ||| ||||| |||| |||||
Sbjct: 49  gcacgccaagacggactccgacgtgacgagcctggcggcgtccacgccgccgcggtcccc 108

             
Query: 146 gc 147
           ||
Sbjct: 109 gc 110
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 86       gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
                |||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||||
Sbjct: 27129085 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 27129032
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>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 86    gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
             |||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||||
Sbjct: 25534 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 25481
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1486_E07
          Length = 110494

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 86     gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
              |||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||||
Sbjct: 100734 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 100681
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>dbj|AK109816.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H09, full
           insert sequence
          Length = 1842

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 86  gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
           |||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||||
Sbjct: 121 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 174
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>dbj|AK109748.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-F05, full
           insert sequence
          Length = 2462

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 86  gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
           |||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||||
Sbjct: 118 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 171
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>dbj|AK073500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044J15, full
           insert sequence
          Length = 1255

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 86  gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
           |||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||||
Sbjct: 60  gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 113
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>ref|XM_550351.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1266

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 83  gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
           ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| ||||
Sbjct: 128 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 184
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                        
Query: 83      gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
               ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| ||||
Sbjct: 3194921 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 3194977
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>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0681F10
          Length = 170371

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                       
Query: 83     gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
              ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| ||||
Sbjct: 149106 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 149162
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>dbj|AK106071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H07, full
           insert sequence
          Length = 1307

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 83  gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
           ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| ||||
Sbjct: 126 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 182
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>dbj|AK073824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070N04, full
           insert sequence
          Length = 1427

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 83  gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
           ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| ||||
Sbjct: 125 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 181
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>dbj|AK060328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-A10, full
           insert sequence
          Length = 1266

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 83  gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
           ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| ||||
Sbjct: 128 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 184
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>dbj|AK058295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F03, full
           insert sequence
          Length = 1463

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 83  gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 139
           ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| ||||
Sbjct: 115 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 171
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>ref|XM_472540.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1473

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 85  tgcacgccaagacggactcggaggtgac 112
           ||||||| ||||||||||||||||||||
Sbjct: 467 tgcacgcgaagacggactcggaggtgac 494
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>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
            complete sequence
          Length = 144811

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 85   tgcacgccaagacggactcggaggtgac 112
            ||||||| ||||||||||||||||||||
Sbjct: 9106 tgcacgcgaagacggactcggaggtgac 9133
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>dbj|AK106337.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G03, full
           insert sequence
          Length = 1384

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 85  tgcacgccaagacggactcggaggtgac 112
           ||||||| ||||||||||||||||||||
Sbjct: 121 tgcacgcgaagacggactcggaggtgac 148
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>dbj|AK072050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110C07, full
           insert sequence
          Length = 1340

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 85  tgcacgccaagacggactcggaggtgac 112
           ||||||| ||||||||||||||||||||
Sbjct: 103 tgcacgcgaagacggactcggaggtgac 130
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>gb|AY108252.1| Zea mays PCO090236 mRNA sequence
          Length = 1456

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 83  gatgcacgccaagacggactcggaggtgaccagcctggcg 122
           ||||||||||||| |||| ||||| ||||| |||||||||
Sbjct: 182 gatgcacgccaagtcggagtcggacgtgacgagcctggcg 221
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>ref|XM_475885.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 909

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 126 tcctcgccggcgcgctccccgccgagg 152
           |||||| ||||||||||||||||||||
Sbjct: 149 tcctcggcggcgcgctccccgccgagg 175
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>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10,
              complete sequence
          Length = 116469

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 126    tcctcgccggcgcgctccccgccgagg 152
              |||||| ||||||||||||||||||||
Sbjct: 114970 tcctcggcggcgcgctccccgccgagg 114996
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 126      tcctcgccggcgcgctccccgccgagg 152
                |||||| ||||||||||||||||||||
Sbjct: 27402513 tcctcggcggcgcgctccccgccgagg 27402539
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>emb|BX545855.16| Zebrafish DNA sequence from clone CH211-212N6 in linkage group 9,
              complete sequence
          Length = 204962

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 139    gctccccgccgagggcggccgccaac 164
              ||||| ||||||||||||||||||||
Sbjct: 151948 gctcctcgccgagggcggccgccaac 151923
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>ref|XM_450682.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 123 ccctcctcgccggcgcgctcc 143
           |||||||||||||||||||||
Sbjct: 668 ccctcctcgccggcgcgctcc 688
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>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete
             sequence
          Length = 232408

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 26    aagcaagcagatccaagcagagtgagcag 54
             ||||||||||| |||| ||||||||||||
Sbjct: 55164 aagcaagcagagccaaccagagtgagcag 55192
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 123      ccctcctcgccggcgcgctcc 143
                |||||||||||||||||||||
Sbjct: 12210232 ccctcctcgccggcgcgctcc 12210212
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>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1759_F09
          Length = 149501

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 123    ccctcctcgccggcgcgctcc 143
              |||||||||||||||||||||
Sbjct: 121691 ccctcctcgccggcgcgctcc 121671
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>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0564H06
          Length = 146823

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 123    ccctcctcgccggcgcgctcc 143
              |||||||||||||||||||||
Sbjct: 144611 ccctcctcgccggcgcgctcc 144591
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>dbj|AK105479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-A10, full
           insert sequence
          Length = 1440

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 123 ccctcctcgccggcgcgctcc 143
           |||||||||||||||||||||
Sbjct: 773 ccctcctcgccggcgcgctcc 793
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>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0045D11 map near 50283S, complete sequence
          Length = 148306

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   cctcctcgccggcgcgctcc 143
             ||||||||||||||||||||
Sbjct: 70860 cctcctcgccggcgcgctcc 70841
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 124     cctcctcgccggcgcgctccccgc 147
               ||||||||||||||||||| ||||
Sbjct: 5033067 cctcctcgccggcgcgctcgccgc 5033044



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 124     cctcctcgccggcgcgctccccgc 147
               ||||||||||||||||||| ||||
Sbjct: 4446176 cctcctcgccggcgcgctcgccgc 4446199
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>emb|CR376761.19| Zebrafish DNA sequence from clone DKEY-6F24 in linkage group 2, complete
              sequence
          Length = 231384

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 139    gctccccgccgagggcggccgccaacaa 166
              ||||| ||||||||||| ||||||||||
Sbjct: 202951 gctcctcgccgagggcgcccgccaacaa 202924
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>emb|AL353579.17| Human DNA sequence from clone RP3-355M6 on chromosome 6 Contains the
             PIM1 gene for pim-1 oncogene (PIM), a novel gene, the 5'
             end of the TBC1D22B gene for TBC1D22B and a CpG island,
             complete sequence
          Length = 134010

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   gcgccctcctcgccggcgcgctcc 143
             ||||||||| ||||||||||||||
Sbjct: 26597 gcgccctccccgccggcgcgctcc 26620
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>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   cctcctcgccggcgcgctccccgc 147
             ||||||||||||||||||| ||||
Sbjct: 97521 cctcctcgccggcgcgctcgccgc 97498
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>emb|BX119976.8| Zebrafish DNA sequence from clone CH211-196F5 in linkage group 20
             Contains the gene for a novel protein (zgc:63952), the 3'
             end of the gene for a novel protein similar to mouse and
             human importin 4 (IPO4), three genes for transposase, a
             novel gene and six CpG islands, complete sequence
          Length = 190000

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 139   gctccccgccgagggcggccgccaacaa 166
             ||||| ||||||||||| ||||||||||
Sbjct: 63543 gctcctcgccgagggcgcccgccaacaa 63570
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>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 124    cctcctcgccggcgcgctccccgc 147
              ||||||||||||||||||| ||||
Sbjct: 136640 cctcctcgccggcgcgctcgccgc 136663
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>gb|DQ067482.1| Tarsius syrichta msh homeobox 1-like protein (MSX1) gene, exon 1
           and partial cds
          Length = 477

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 115 gcctggcgccctcctcgccggcgc 138
           ||||||||||||||||| ||||||
Sbjct: 134 gcctggcgccctcctcggcggcgc 111
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>gb|AF386792.1|AF386792 Homo sapiens proto-oncogene PIM1 (PIM1) gene, exons 1 through 4 and
           partial cds
          Length = 3183

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 120 gcgccctcctcgccggcgcgctcc 143
           ||||||||| ||||||||||||||
Sbjct: 718 gcgccctccccgccggcgcgctcc 741
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>gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, complete sequence
          Length = 182243

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    aagcagatccaagcagagtgagca 53
             ||||||| ||||||||||||||||
Sbjct: 88104 aagcagacccaagcagagtgagca 88127
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>dbj|AK037001.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930034P14 product:IMPORTIN BETA-2 SUBUNIT
            (KARYOPHERIN BETA-2 SUBUNIT) (TRANSPORTIN) (M9 REGION
            INTERACTION PROTEIN) (MIP) homolog [Homo sapiens], full
            insert sequence
          Length = 3128

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 27   agcaagcagatccaagcagagtgagcag 54
            |||||||||| |||| ||||||||||||
Sbjct: 1879 agcaagcagagccaaccagagtgagcag 1906
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 124      cctcctcgccggcgcgctcc 143
                ||||||||||||||||||||
Sbjct: 13938023 cctcctcgccggcgcgctcc 13938004
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 124     cctcctcgccggcgcgctccccgc 147
               ||||||||||||||||||| ||||
Sbjct: 5032282 cctcctcgccggcgcgctcgccgc 5032259



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 124     cctcctcgccggcgcgctccccgc 147
               ||||||||||||||||||| ||||
Sbjct: 4446291 cctcctcgccggcgcgctcgccgc 4446314
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>emb|BX829387.1|CNS09YYF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB10ZD03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1256

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 83  gatgcacgccaagacggactcggaggtgaccagcct 118
           ||||||||||||||| |||||  ||||||| |||||
Sbjct: 59  gatgcacgccaagaccgactcccaggtgacaagcct 94
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>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0042J17, complete sequence
          Length = 171442

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   cctcctcgccggcgcgctccccgc 147
             ||||||||||||||||||| ||||
Sbjct: 51468 cctcctcgccggcgcgctcgccgc 51491
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>gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome 13, complete sequence
          Length = 200650

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 27    agcaagcagatccaagcagagtgagcag 54
             |||||||||| |||| ||||||||||||
Sbjct: 52783 agcaagcagagccaaccagagtgagcag 52756
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ggcgccctcctcgccggcgc 138
              ||||||||||||||||||||
Sbjct: 818374 ggcgccctcctcgccggcgc 818355
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>dbj|AK069996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040B08, full
           insert sequence
          Length = 1502

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 cctcctcgccggcgcgctcc 143
           ||||||||||||||||||||
Sbjct: 309 cctcctcgccggcgcgctcc 328
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 131    gccggcgcgctccccgccgagggcggcc 158
              |||||||||||| ||||||||| |||||
Sbjct: 103382 gccggcgcgctcgccgccgaggacggcc 103355
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 124      cctcctcgccggcgcgctcc 143
                ||||||||||||||||||||
Sbjct: 14020025 cctcctcgccggcgcgctcc 14020006
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>emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chromosome X, complete
              sequence
          Length = 216812

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 27     agcaagcagatccaagcagagtgagcag 54
              |||||||||| |||| ||||||||||||
Sbjct: 170222 agcaagcagagccaaccagagtgagcag 170195
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 152     ggcggccgccaacaacaacgccgg 175
               ||||||||||| ||||||||||||
Sbjct: 2001091 ggcggccgccagcaacaacgccgg 2001068
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>gb|M27903.1|HUMPIM1A Human pim-1 proto-oncogene gene, complete cds
          Length = 6113

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 120 gcgccctcctcgccggcgcgctcc 143
           ||||||||| ||||||||||||||
Sbjct: 718 gcgccctccccgccggcgcgctcc 741
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>emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chromosome 15, complete
            sequence
          Length = 236344

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 27   agcaagcagatccaagcagagtgagcag 54
            |||||||||| |||| ||||||||||||
Sbjct: 1804 agcaagcagagccaaccagagtgagcag 1831
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>emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chromosome 15, complete
             sequence
          Length = 220050

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 27    agcaagcagatccaagcagagtgagcag 54
             |||||||||| |||| ||||||||||||
Sbjct: 76201 agcaagcagagccaaccagagtgagcag 76174
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>gb|M34228.1|HUMPIM1B Human protein kinase (Pim-1) promoter DNA
          Length = 1737

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 120  gcgccctcctcgccggcgcgctcc 143
            ||||||||| ||||||||||||||
Sbjct: 1669 gcgccctccccgccggcgcgctcc 1692


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,941,509
Number of Sequences: 3902068
Number of extensions: 1941509
Number of successful extensions: 115638
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113583
Number of HSP's gapped (non-prelim): 2055
length of query: 218
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 196
effective length of database: 17,147,199,772
effective search space: 3360851155312
effective search space used: 3360851155312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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