>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +1

Query: 49  MAASLQAAATLMPAKIGGRASSVRPXSHV 135
           MAASLQAAAT+MPAKIGGRASS RP SHV
Sbjct: 1   MAASLQAAATVMPAKIGGRASSARPSSHV 29

>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score = 34.3 bits (77), Expect = 0.098
 Identities = 18/30 (60%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
 Frame = +1

Query: 49  MAASLQAAATLMPAKIGGRA-SSVRPXSHV 135
           MA+SLQAAATL+PAK+G  A + +R  SH+
Sbjct: 1   MASSLQAAATLIPAKVGAPARTHLRSNSHL 30

>34KD_MYCTU (P65637) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 32.0 bits (71), Expect = 0.48
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 21  FPRTKPTDQHGSVSPSRGHADAGQDRRPGLLRAA 122
           +P+ +P   +G V+PS  HAD G  + P  L  A
Sbjct: 10  YPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIA 43

>34KD_MYCBO (P65638) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 32.0 bits (71), Expect = 0.48
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 21  FPRTKPTDQHGSVSPSRGHADAGQDRRPGLLRAA 122
           +P+ +P   +G V+PS  HAD G  + P  L  A
Sbjct: 10  YPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIA 43

>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 16/19 (84%), Positives = 17/19 (89%), Gaps = 1/19 (5%)
 Frame = +1

Query: 49  MAASLQAAATLM-PAKIGG 102
           MAASLQAAATLM P K+GG
Sbjct: 1   MAASLQAAATLMQPTKVGG 19

>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 16/20 (80%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
 Frame = +1

Query: 49  MAASLQAAATLM-PAKIGGR 105
           MAASLQAAATLM P K+G R
Sbjct: 1   MAASLQAAATLMQPTKVGVR 20

>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding|
           athanogene-3) (BAG-3) (Bcl-2-binding protein Bis)
          Length = 577

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 22  SRVPSPPTNMAASLQAAATLMPAK 93
           S VPSPP N+AA  +AA +  PA+
Sbjct: 386 SAVPSPPKNVAAEQKAAPSPAPAE 409

>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast|
          precursor (OEE1) (33 kDa subunit of oxygen evolving
          system of photosystem II) (OEC 33 kDa subunit) (33 kDa
          thylakoid membrane protein)
          Length = 332

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 15/18 (83%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
 Frame = +1

Query: 49 MAASLQAAATLM-PAKIG 99
          MAASLQAAATLM P K+G
Sbjct: 1  MAASLQAAATLMQPTKVG 18

>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 1   NHE*DRSSRVPSPPTNMAASLQAAATLMPAKIGGRASSVR 120
           +H     + VP PP +      +  +LMP + GG +SS+R
Sbjct: 160 HHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLR 199

>RPOB_THEMA (P29398) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1263

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 18  IFPRTKPTDQHGSVSPSRGHADAGQDRR 101
           I P T P D+ G++ P R  A  G+D R
Sbjct: 659 IIPATTPVDEEGNIIPERVVARMGEDIR 686


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,740,938
Number of Sequences: 219361
Number of extensions: 293151
Number of successful extensions: 1225
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 80,573,946
effective HSP length: 22
effective length of database: 75,748,004
effective search space used: 1817952096
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)