ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet50h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC122845.4| Mus musculus BAC clone RP23-155G2 from 1, complet... 42 0.38
2gb|AC153008.4| Mus musculus BAC clone RP23-457I7 from chromosome... 42 0.38
3gb|AC140553.3| Mus musculus BAC clone RP24-71M17 from 1, complet... 42 0.38
4gb|AC160552.13| Mus musculus chromosome 3, clone RP23-326D6, com... 40 1.5
5ref|XM_317135.2| Anopheles gambiae str. PEST ENSANGP00000018263 ... 40 1.5
6emb|AL772186.11| Mouse DNA sequence from clone RP23-281K3 on chr... 40 1.5
7gb|AC154663.2| Mus musculus BAC clone RP24-283H12 from 16, compl... 40 1.5
8gb|AF000941.1|AF000941 Mus musculus DNAse I hypersensitive sites... 40 1.5
9gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 38 5.9
10gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 38 5.9
11gb|BC077257.1| Xenopus laevis retinoblastoma A associated protei... 38 5.9
12gb|AC069309.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 38 5.9
13gb|AC140278.2| Mus musculus BAC clone RP24-313J18 from chromosom... 38 5.9
14gb|AC016250.5| Homo sapiens chromosome 8 clone RP11-516P9, compl... 38 5.9
15gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole b... 38 5.9
16ref|XM_992605.1| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
17ref|XM_992720.1| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
18ref|XM_992762.1| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
19ref|XM_992739.1| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
20ref|XM_001004792.1| PREDICTED: Mus musculus bromodomain and PHD ... 38 5.9
21ref|XM_001004807.1| PREDICTED: Mus musculus bromodomain and PHD ... 38 5.9
22ref|XM_001004813.1| PREDICTED: Mus musculus bromodomain and PHD ... 38 5.9
23ref|XM_001004810.1| PREDICTED: Mus musculus bromodomain and PHD ... 38 5.9
24ref|XM_993951.1| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
25ref|XM_923895.2| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
26ref|XM_994075.1| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
27ref|XM_992849.1| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
28ref|XM_196171.7| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
29ref|XM_892549.2| PREDICTED: Mus musculus bromodomain and PHD fin... 38 5.9
30gb|AF131216.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTB-... 38 5.9
31gb|AC145198.3| Mus musculus BAC clone RP23-396H3 from chromosome... 38 5.9
32emb|AL731574.10| Human DNA sequence from clone RP11-56I23 on chr... 38 5.9
33emb|AL606760.9| Human DNA sequence from clone RP5-1024G6 on chro... 38 5.9
34gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence 38 5.9
35gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, compl... 38 5.9
36gb|AC022239.16| Homo sapiens chromosome 8, clone RP11-148O21, co... 38 5.9
37gb|AC010335.8| Homo sapiens chromosome 19 clone CTD-3137H5, comp... 38 5.9
38gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome... 38 5.9
39gb|DP000062.1| Sus scrofa target 117 genomic scaffold 38 5.9
40gb|AC069262.24| Homo sapiens 12 BAC RP11-753B7 (Roswell Park Can... 38 5.9
41dbj|AK147555.1| Mus musculus cDNA, RIKEN full-length enriched li... 38 5.9
42dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.9
43dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.9
44gb|AF234171.2|AF234171 Mus musculus STAT5B (Stat5b) gene, comple... 38 5.9
45gb|AC073393.2|AC073393 Oryza sativa (japonica cultivar-group) ch... 38 5.9
46gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, comp... 38 5.9
47gb|M58652.1|BOVELAS Bovine elastin gene, exon 1 38 5.9
48gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell ... 38 5.9
49gb|AC008397.7|AC008397 Homo sapiens chromosome 19 clone CTC-251H... 38 5.9
50gb|AY140729.1| Anhima cornuta cytochrome c oxidase subunit I (CO... 38 5.9
51ref|XM_240449.3| PREDICTED: Rattus norvegicus G protein-coupled ... 38 5.9
52dbj|AK129322.1| Mus musculus mRNA for mKIAA1286 protein 38 5.9
53gb|AC103389.10| Mus musculus chromosome 3, clone RP24-419J17, co... 38 5.9
54emb|AL445594.3|CNS07ED4 Human chromosome 14 DNA sequence BAC R-7... 38 5.9
55dbj|AK063519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.9
56gb|AF073787.1|AF073787 Xenopus laevis retinoblastoma A associate... 38 5.9
57emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chr... 38 5.9
58dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 38 5.9
59gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 5.9
60gb|AC005581.1|AC005581 Homo sapiens chromosome 19, cosmid R31237... 38 5.9
61gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 5.9
62emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC... 38 5.9
63gb|AC122247.5| Mus musculus BAC clone RP23-155D8 from 16, comple... 38 5.9
64emb|CT009579.20| Mouse DNA sequence from clone CH29-133M20 on ch... 38 5.9
65emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chr... 38 5.9
66emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chr... 38 5.9
67emb|AL352981.4|CNS05TC0 Human chromosome 14 DNA sequence BAC R-1... 38 5.9
68gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, compl... 38 5.9
69gb|J02855.1|BOVTELASTI Bovine tropoelastin gene, partial cds 38 5.9 
>gb|AC122845.4| Mus musculus BAC clone RP23-155G2 from 1, complete sequence
          Length = 215455

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 102    ctgctgtcctcctgcttcctc 122
              |||||||||||||||||||||
Sbjct: 189995 ctgctgtcctcctgcttcctc 190015
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>gb|AC153008.4| Mus musculus BAC clone RP23-457I7 from chromosome 15, complete sequence
          Length = 171878

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 99    ctcctgctgtcctcctgcttc 119
             |||||||||||||||||||||
Sbjct: 95126 ctcctgctgtcctcctgcttc 95146
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>gb|AC140553.3| Mus musculus BAC clone RP24-71M17 from 1, complete sequence
          Length = 217538

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   ctgctgtcctcctgcttcctc 122
             |||||||||||||||||||||
Sbjct: 95472 ctgctgtcctcctgcttcctc 95492
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>gb|AC160552.13| Mus musculus chromosome 3, clone RP23-326D6, complete sequence
          Length = 210051

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     tgcttctggctcctcctgct 106
              ||||||||||||||||||||
Sbjct: 124741 tgcttctggctcctcctgct 124760
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>ref|XM_317135.2| Anopheles gambiae str. PEST ENSANGP00000018263
           (ENSANGG00000015774), partial mRNA
          Length = 1233

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  ccggtcgatcgaaagcagca 46
           ||||||||||||||||||||
Sbjct: 901 ccggtcgatcgaaagcagca 920
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>emb|AL772186.11| Mouse DNA sequence from clone RP23-281K3 on chromosome 4, complete
             sequence
          Length = 205714

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    cctcctgctgtcctcctgct 117
             ||||||||||||||||||||
Sbjct: 54152 cctcctgctgtcctcctgct 54171
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>gb|AC154663.2| Mus musculus BAC clone RP24-283H12 from 16, complete sequence
          Length = 177341

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    tctggctcctcctgctgtcc 110
             ||||||||||||||||||||
Sbjct: 66745 tctggctcctcctgctgtcc 66726
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>gb|AF000941.1|AF000941 Mus musculus DNAse I hypersensitive sites 2-6 of locus control region
            (LCR) for T-cell receptor alpha chain (TCRa) gene
          Length = 4980

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  tcctcctgcttcctctcccg 127
            ||||||||||||||||||||
Sbjct: 4719 tcctcctgcttcctctcccg 4700
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 4      accgatcgagtaaccgatc 22
              |||||||||||||||||||
Sbjct: 739129 accgatcgagtaaccgatc 739147
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0003C04 map S10003, complete sequence
          Length = 119238

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 94    ggctcctcctgctgtcctcctgc 116
             ||||||| |||||||||||||||
Sbjct: 66910 ggctcctgctgctgtcctcctgc 66888
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>gb|BC077257.1| Xenopus laevis retinoblastoma A associated protein, mRNA (cDNA clone
            MGC:79922 IMAGE:4968802), complete cds
          Length = 1611

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 85   gctgcttctggctcctcct 103
            |||||||||||||||||||
Sbjct: 1408 gctgcttctggctcctcct 1426
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>gb|AC069309.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-154D15, complete
              sequence
          Length = 174754

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 108    tcctcctgcttcctctccc 126
              |||||||||||||||||||
Sbjct: 124810 tcctcctgcttcctctccc 124828
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>gb|AC140278.2| Mus musculus BAC clone RP24-313J18 from chromosome 17, complete
             sequence
          Length = 180727

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 89    cttctggctcctcctgctg 107
             |||||||||||||||||||
Sbjct: 94230 cttctggctcctcctgctg 94248
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>gb|AC016250.5| Homo sapiens chromosome 8 clone RP11-516P9, complete sequence
          Length = 199569

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 86   ctgcttctggctcctcctg 104
            |||||||||||||||||||
Sbjct: 6215 ctgcttctggctcctcctg 6197
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>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene
             cluster, complete sequence
          Length = 84868

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 101   cctgctgtcctcctgcttc 119
             |||||||||||||||||||
Sbjct: 60190 cctgctgtcctcctgcttc 60208
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>ref|XM_992605.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 2 (Brpf3), mRNA
          Length = 6005

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2407 cttctggctcctcctgctg 2389
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>ref|XM_992720.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 6 (Brpf3), mRNA
          Length = 6134

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2536 cttctggctcctcctgctg 2518
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>ref|XM_992762.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 8 (Brpf3), mRNA
          Length = 5541

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2536 cttctggctcctcctgctg 2518
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>ref|XM_992739.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 7 (Brpf3), mRNA
          Length = 5731

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2726 cttctggctcctcctgctg 2708
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>ref|XM_001004792.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 2 (Brpf3), mRNA
          Length = 6233

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2407 cttctggctcctcctgctg 2389
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>ref|XM_001004807.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 6 (Brpf3), mRNA
          Length = 6362

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2536 cttctggctcctcctgctg 2518
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>ref|XM_001004813.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 8 (Brpf3), mRNA
          Length = 5769

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2536 cttctggctcctcctgctg 2518
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>ref|XM_001004810.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 7 (Brpf3), mRNA
          Length = 5947

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2714 cttctggctcctcctgctg 2696
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>ref|XM_993951.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 15 (Brpf3), mRNA
          Length = 6247

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2407 cttctggctcctcctgctg 2389
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>ref|XM_923895.2| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 11 (Brpf3), mRNA
          Length = 6376

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2536 cttctggctcctcctgctg 2518
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>ref|XM_994075.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 17 (Brpf3), mRNA
          Length = 5783

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2536 cttctggctcctcctgctg 2518
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>ref|XM_992849.1| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 7 (Brpf3), mRNA
          Length = 6247

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2407 cttctggctcctcctgctg 2389
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>ref|XM_196171.7| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 1 (Brpf3), mRNA
          Length = 6376

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2536 cttctggctcctcctgctg 2518
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>ref|XM_892549.2| PREDICTED: Mus musculus bromodomain and PHD finger containing, 3,
            transcript variant 2 (Brpf3), mRNA
          Length = 5973

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2726 cttctggctcctcctgctg 2708
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>gb|AF131216.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTB-164D9, CTB-169o5,
              CTB-65D4, CTC-271o23, CTC-367J24, complete sequence; and
              clones CTC-493P15, CTB-91N18, partial sequence
          Length = 321261

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     gctgcttctggctcctcct 103
              |||||||||||||||||||
Sbjct: 269241 gctgcttctggctcctcct 269259
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>gb|AC145198.3| Mus musculus BAC clone RP23-396H3 from chromosome 16, complete sequence
          Length = 201219

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                            
Query: 85    gctgcttctggctcctcctgctgtcctcctg 115
             ||||||||||| |||||||||| ||||||||
Sbjct: 40067 gctgcttctggttcctcctgct-tcctcctg 40096
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>emb|AL731574.10| Human DNA sequence from clone RP11-56I23 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 138682

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 98    cctcctgctgtcctcctgc 116
             |||||||||||||||||||
Sbjct: 31760 cctcctgctgtcctcctgc 31742
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>emb|AL606760.9| Human DNA sequence from clone RP5-1024G6 on chromosome 1 Contains the
             CPT2 gene for carnitine palmitoyltransferase II, two novel
             genes, gene FLJ20580, the MAGOH gene for mago-nashi
             homolog, proliferation-associated (Drosophila) and the 3'
             end of the LRP8 gene for low density lipoprotein
             receptor-related protein 8 apolipoprotein e receptor,
             complete sequence
          Length = 120890

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 108   tcctcctgcttcctctccc 126
             |||||||||||||||||||
Sbjct: 28369 tcctcctgcttcctctccc 28387
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>gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence
          Length = 164663

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 109   cctcctgcttcctctcccg 127
             |||||||||||||||||||
Sbjct: 88052 cctcctgcttcctctcccg 88034
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>gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, complete sequence
          Length = 229643

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 62     ccaaatgaggagccgcctc 80
              |||||||||||||||||||
Sbjct: 144256 ccaaatgaggagccgcctc 144274
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>gb|AC022239.16| Homo sapiens chromosome 8, clone RP11-148O21, complete sequence
          Length = 191630

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 85    gctgcttctggctcctcct 103
             |||||||||||||||||||
Sbjct: 12363 gctgcttctggctcctcct 12381
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>gb|AC010335.8| Homo sapiens chromosome 19 clone CTD-3137H5, complete sequence
          Length = 137831

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 98    cctcctgctgtcctcctgc 116
             |||||||||||||||||||
Sbjct: 39817 cctcctgctgtcctcctgc 39799
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>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
            nbxb0068N06, complete sequence
          Length = 174019

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 40   agcagcagtacgtacgcagcagc 62
            ||||||| |||||||||||||||
Sbjct: 3793 agcagcaatacgtacgcagcagc 3771
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>gb|DP000062.1| Sus scrofa target 117 genomic scaffold
          Length = 605739

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 28/30 (93%), Gaps = 2/30 (6%)
 Strand = Plus / Minus

                                            
Query: 97     tcctcctgctg--tcctcctgcttcctctc 124
              |||||||||||  |||||||||||||||||
Sbjct: 255015 tcctcctgctgcatcctcctgcttcctctc 254986
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>gb|AC069262.24| Homo sapiens 12 BAC RP11-753B7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 190723

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 108    tcctcctgcttcctctccc 126
              |||||||||||||||||||
Sbjct: 105475 tcctcctgcttcctctccc 105493
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>dbj|AK147555.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1075N18 product:bromodomain and PHD finger
            containing, 3, full insert sequence
          Length = 5724

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   cttctggctcctcctgctg 107
            |||||||||||||||||||
Sbjct: 2725 cttctggctcctcctgctg 2707
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 94       ggctcctcctgctgtcctcctgc 116
                ||||||| |||||||||||||||
Sbjct: 28262108 ggctcctgctgctgtcctcctgc 28262086
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 40       agcagcagtacgtacgcagcagc 62
                ||||||| |||||||||||||||
Sbjct: 15832269 agcagcaatacgtacgcagcagc 15832247
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>gb|AF234171.2|AF234171 Mus musculus STAT5B (Stat5b) gene, complete cds
          Length = 71512

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    ctcctgctgtcctcctgcttcct 121
             |||||||| ||||||||||||||
Sbjct: 35788 ctcctgctatcctcctgcttcct 35766
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>gb|AC073393.2|AC073393 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0076M18,
              complete sequence
          Length = 132647

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 40     agcagcagtacgtacgcagcagc 62
              ||||||| |||||||||||||||
Sbjct: 127229 agcagcaatacgtacgcagcagc 127207
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>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence
          Length = 166153

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    ctggctcctcctgctgtcc 110
             |||||||||||||||||||
Sbjct: 81144 ctggctcctcctgctgtcc 81162
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>gb|M58652.1|BOVELAS Bovine elastin gene, exon 1
          Length = 2709

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 109  cctcctgcttcctctcccg 127
            |||||||||||||||||||
Sbjct: 1731 cctcctgcttcctctcccg 1749
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>gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 195667

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 99     ctcctgctgtcctcctgcttcct 121
              |||||||| ||||||||||||||
Sbjct: 145925 ctcctgctatcctcctgcttcct 145903
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>gb|AC008397.7|AC008397 Homo sapiens chromosome 19 clone CTC-251H24, complete sequence
          Length = 209519

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 98     cctcctgctgtcctcctgc 116
              |||||||||||||||||||
Sbjct: 194398 cctcctgctgtcctcctgc 194380
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>gb|AY140729.1| Anhima cornuta cytochrome c oxidase subunit I (COI) gene, partial
           cds; mitochondrial gene for mitochondrial product
          Length = 687

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  ctcctcctgctgtcctcct 114
           |||||||||||||||||||
Sbjct: 163 ctcctcctgctgtcctcct 181
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>ref|XM_240449.3| PREDICTED: Rattus norvegicus G protein-coupled receptor 124
            (predicted) (Gpr124_predicted), mRNA
          Length = 5127

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 101  cctgctgtcctcctgcttc 119
            |||||||||||||||||||
Sbjct: 4352 cctgctgtcctcctgcttc 4370
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>dbj|AK129322.1| Mus musculus mRNA for mKIAA1286 protein
          Length = 4524

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 89  cttctggctcctcctgctg 107
           |||||||||||||||||||
Sbjct: 981 cttctggctcctcctgctg 963
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>gb|AC103389.10| Mus musculus chromosome 3, clone RP24-419J17, complete sequence
          Length = 162643

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 62     ccaaatgaggagccgcctc 80
              |||||||||||||||||||
Sbjct: 144609 ccaaatgaggagccgcctc 144591
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>emb|AL445594.3|CNS07ED4 Human chromosome 14 DNA sequence BAC R-74H1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171409

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    ctgctgtcctcctgcttcc 120
              |||||||||||||||||||
Sbjct: 117735 ctgctgtcctcctgcttcc 117753
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>dbj|AK063519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H06, full
            insert sequence
          Length = 2147

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 94   ggctcctcctgctgtcctcctgc 116
            ||||||| |||||||||||||||
Sbjct: 1523 ggctcctgctgctgtcctcctgc 1501
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>gb|AF073787.1|AF073787 Xenopus laevis retinoblastoma A associated protein mRNA, complete cds
          Length = 1972

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 85   gctgcttctggctcctcct 103
            |||||||||||||||||||
Sbjct: 1703 gctgcttctggctcctcct 1721
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>emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chromosome 4, complete
              sequence
          Length = 230886

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 92     ctggctcctcctgctgtcc 110
              |||||||||||||||||||
Sbjct: 111467 ctggctcctcctgctgtcc 111485
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>dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB2047A4
          Length = 179110

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 86    ctgcttctggctcctcctg 104
             |||||||||||||||||||
Sbjct: 56725 ctgcttctggctcctcctg 56743
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 40       agcagcagtacgtacgcagcagc 62
                ||||||| |||||||||||||||
Sbjct: 15840510 agcagcaatacgtacgcagcagc 15840488
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>gb|AC005581.1|AC005581 Homo sapiens chromosome 19, cosmid R31237, complete sequence
          Length = 39601

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 98   cctcctgctgtcctcctgcttcc 120
            ||||||| |||||||||||||||
Sbjct: 6227 cctcctgttgtcctcctgcttcc 6249
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 94       ggctcctcctgctgtcctcctgc 116
                ||||||| |||||||||||||||
Sbjct: 28246687 ggctcctgctgctgtcctcctgc 28246665
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>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1,
             ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10,
             ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and
             ORF19
          Length = 86080

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 101   cctgctgtcctcctgcttc 119
             |||||||||||||||||||
Sbjct: 60108 cctgctgtcctcctgcttc 60126
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>gb|AC122247.5| Mus musculus BAC clone RP23-155D8 from 16, complete sequence
          Length = 208505

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                             
Query: 85     gctgcttctggctcctcctgctgtcctcctg 115
              ||||||||||| |||||||||| ||||||||
Sbjct: 164566 gctgcttctggttcctcctgct-tcctcctg 164595
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>emb|CT009579.20| Mouse DNA sequence from clone CH29-133M20 on chromosome 17, complete
             sequence
          Length = 219682

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    cttctggctcctcctgctg 107
             |||||||||||||||||||
Sbjct: 48991 cttctggctcctcctgctg 48973
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>emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chromosome 11, complete
              sequence
          Length = 239847

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 99     ctcctgctgtcctcctgcttcct 121
              |||||||| ||||||||||||||
Sbjct: 180241 ctcctgctatcctcctgcttcct 180219
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>emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chromosome X, complete
             sequence
          Length = 203581

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                        
Query: 96    ctcctcctgctgtcctcctgcttcctc 122
             ||||||||||| |||||||||||||||
Sbjct: 43627 ctcctcctgct-tcctcctgcttcctc 43602
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>emb|AL352981.4|CNS05TC0 Human chromosome 14 DNA sequence BAC R-15E14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158214

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   ctgctgtcctcctgcttcc 120
             |||||||||||||||||||
Sbjct: 35939 ctgctgtcctcctgcttcc 35957
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>gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, complete sequence
          Length = 187685

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 76    gcctctcccgctgcttctggctcctcc 102
             |||||||| ||||||||||||| ||||
Sbjct: 84113 gcctctcctgctgcttctggctgctcc 84139
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>gb|J02855.1|BOVTELASTI Bovine tropoelastin gene, partial cds
          Length = 1285

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 cctcctgcttcctctcccg 127
           |||||||||||||||||||
Sbjct: 492 cctcctgcttcctctcccg 510


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,097,418
Number of Sequences: 3902068
Number of extensions: 1097418
Number of successful extensions: 88277
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 88055
Number of HSP's gapped (non-prelim): 227
length of query: 127
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 106
effective length of database: 17,151,101,840
effective search space: 1818016795040
effective search space used: 1818016795040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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