| Clone Name | baet50h05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ125487.1| Toxoplasma gondii structural maintenance of chromosome 4 (SMC4) gene, complete cds Length = 15840 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cgagacgttgcagaacgaag 111 |||||||||||||||||||| Sbjct: 10191 cgagacgttgcagaacgaag 10210
>ref|XM_803340.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510635.40) partial mRNA Length = 825 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaagcaaaagcgaagag 124 |||||||||||||||||||| Sbjct: 803 aacgaagcaaaagcgaagag 822
>gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosome 12, complete sequence Length = 157411 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 actgaaaatctgaagcaga 71 ||||||||||||||||||| Sbjct: 56802 actgaaaatctgaagcaga 56820
>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7 Length = 349652 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 ccgccaccggttcactgaa 58 ||||||||||||||||||| Sbjct: 68705 ccgccaccggttcactgaa 68687
>gb|AC026975.5| Homo sapiens chromosome 11, clone RP11-709C9, complete sequence Length = 200105 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 aaatctgaagcagatcagggcta 80 |||||||||||| |||||||||| Sbjct: 18644 aaatctgaagcaaatcagggcta 18666
>dbj|AP007163.1| Aspergillus oryzae RIB40 genomic DNA, SC166 Length = 338231 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 gttatcgtcgtttcctttatcca 28 ||||||||||||||||| ||||| Sbjct: 90903 gttatcgtcgtttccttcatcca 90925
>gb|AC103828.2| Homo sapiens chromosome 11, clone CTD1-2183M20, complete sequence Length = 136372 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 aaatctgaagcagatcagggcta 80 |||||||||||| |||||||||| Sbjct: 4264 aaatctgaagcaaatcagggcta 4242
>gb|AC108733.4| Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171184 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tttatccaactagcagtat 39 ||||||||||||||||||| Sbjct: 106725 tttatccaactagcagtat 106707
>emb|AJ233827.1|RNO233827 Rattus norvegicus microsatellite sequence clone 28A12 Length = 352 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 55 tgaaaatctgaagcagatcaggg 77 ||||||||||||||||| ||||| Sbjct: 296 tgaaaatctgaagcagaacaggg 318
>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5 Length = 130049 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tgttatcgtcgtttccttt 23 ||||||||||||||||||| Sbjct: 57494 tgttatcgtcgtttccttt 57512 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 762,408 Number of Sequences: 3902068 Number of extensions: 762408 Number of successful extensions: 52038 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52024 Number of HSP's gapped (non-prelim): 14 length of query: 128 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 107 effective length of database: 17,151,101,840 effective search space: 1835167896880 effective search space used: 1835167896880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)