| Clone Name | baet50g12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_615429.2| PREDICTED: Bos taurus similar to Metabotropic glutamate receptor 7 precursor (mGluR7) (LOC535362), mRNA Length = 3431 Score = 42.1 bits (21), Expect = 0.21 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcccaacatggcaagaaagac 41 ||||||||||||||||||||| Sbjct: 1308 tcccaacatggcaagaaagac 1288
>gb|AC161867.6| Mus musculus chromosome 8, clone RP24-281E22, complete sequence Length = 180410 Score = 42.1 bits (21), Expect = 0.21 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccaacatggcaagaaagaccc 43 ||||||||||||||||||||| Sbjct: 15423 ccaacatggcaagaaagaccc 15443
>gb|AC108915.12| Mus musculus chromosome 8, clone RP23-444O13, complete sequence Length = 178228 Score = 42.1 bits (21), Expect = 0.21 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccaacatggcaagaaagaccc 43 ||||||||||||||||||||| Sbjct: 143558 ccaacatggcaagaaagaccc 143578
>ref|XM_550218.1| Oryza sativa (japonica cultivar-group), mRNA Length = 702 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 595 tctccctccgctccgctcc 577
>ref|XM_480044.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1536 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 1363 tctccctccgctccgctcc 1345
>ref|NM_184991.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 1298 tctccctccgctccgctcc 1280
>ref|NM_192008.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1398 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 455 tctccctccgctccgctcc 437
>gb|AY020240.1| Oryza sativa microsatellite MRG2565 containing (GA)X12, genomic sequence Length = 224 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 64 tctccctccgctccgctcc 46
>gb|AY017812.1| Oryza sativa microsatellite MRG0137 containing (AG)X12, genomic sequence Length = 224 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 63 tctccctccgctccgctcc 45
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 55056 tctccctccgctccgctcc 55038
>gb|AC135917.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048K05, complete sequence Length = 104254 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 67146 tctccctccgctccgctcc 67164
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 58495 tctccctccgctccgctcc 58513
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 12853 tctccctccgctccgctcc 12871
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 105635 tctccctccgctccgctcc 105653
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 13959 tctccctccgctccgctcc 13977
>gb|AC125780.2| Oryza sativa (japonica culitvar-group) chromosome 11 BAC clone OSJNBa0030I15, complete sequence Length = 148498 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 27207 tctccctccgctccgctcc 27225
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 36007273 tctccctccgctccgctcc 36007291 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 32045108 tctccctccgctccgctcc 32045126 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 24679509 tctccctccgctccgctcc 24679491 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 6585144 tctccctccgctccgctcc 6585126 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2306770 tctccctccgctccgctcc 2306788 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2296638 tctccctccgctccgctcc 2296656 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 1344015 tctccctccgctccgctcc 1343997
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 127906 tctccctccgctccgctcc 127888
>gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0016O23, complete sequence Length = 149400 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 148155 tctccctccgctccgctcc 148173
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 118218 tctccctccgctccgctcc 118236
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 46577 tctccctccgctccgctcc 46595
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 61793 tctccctccgctccgctcc 61775
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 68784 tctccctccgctccgctcc 68802
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 119754 tctccctccgctccgctcc 119772
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 32068 tctccctccgctccgctcc 32050 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 5126 tctccctccgctccgctcc 5144
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 138539 tctccctccgctccgctcc 138521 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 111597 tctccctccgctccgctcc 111615
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 86295 tctccctccgctccgctcc 86277
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 ccgccgagggcaagatctc 70 ||||||||||||||||||| Sbjct: 43311 ccgccgagggcaagatctc 43329
>tpg|BK000861.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M259, complete sequence Length = 5298 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 4447 tctccctccgctccgctcc 4429
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 110820 tctccctccgctccgctcc 110802
>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11, from chromosome 3, complete sequence Length = 147806 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 5518 tctccctccgctccgctcc 5500
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 137060 tctccctccgctccgctcc 137078
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 46233 tctccctccgctccgctcc 46251
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 121330 tctccctccgctccgctcc 121348
>gb|AC079852.3| Oryza sativa chromosome 10 clone OSJNBa0034A02, complete sequence Length = 185904 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 59011 tctccctccgctccgctcc 59029
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 19048 tctccctccgctccgctcc 19030
>gb|AC099733.2| Oryza sativa chromosome 10 clone OSJNAa0087H07, complete sequence Length = 132268 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 91316 tctccctccgctccgctcc 91298
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 29320 tctccctccgctccgctcc 29302 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 19187 tctccctccgctccgctcc 19169
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 ccgccgagggcaagatctc 70 ||||||||||||||||||| Sbjct: 102883 ccgccgagggcaagatctc 102901
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 35183242 tctccctccgctccgctcc 35183260 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 25652341 tctccctccgctccgctcc 25652323 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 25625399 tctccctccgctccgctcc 25625417
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 28247397 tctccctccgctccgctcc 28247379 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 23959340 tctccctccgctccgctcc 23959358 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 1499423 tctccctccgctccgctcc 1499441 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 768284 tctccctccgctccgctcc 768302
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2556131 tctccctccgctccgctcc 2556149 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2362316 tctccctccgctccgctcc 2362298
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 23612 tctccctccgctccgctcc 23630 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 13480 tctccctccgctccgctcc 13498
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 14078872 tctccctccgctccgctcc 14078890 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2570446 tctccctccgctccgctcc 2570464 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2279818 tctccctccgctccgctcc 2279800
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2358637 tctccctccgctccgctcc 2358619 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2343796 tctccctccgctccgctcc 2343778
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 5320823 tctccctccgctccgctcc 5320805
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 4792632 tctccctccgctccgctcc 4792614 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 993198 tctccctccgctccgctcc 993216
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 28786922 tctccctccgctccgctcc 28786940 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 27055211 tctccctccgctccgctcc 27055193 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 24680809 tctccctccgctccgctcc 24680827 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 22703296 tctccctccgctccgctcc 22703314
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 36097347 tctccctccgctccgctcc 36097365 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 32135620 tctccctccgctccgctcc 32135638 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 24596339 tctccctccgctccgctcc 24596321 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 6584357 tctccctccgctccgctcc 6584339 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2306881 tctccctccgctccgctcc 2306899 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2296748 tctccctccgctccgctcc 2296766 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 1344013 tctccctccgctccgctcc 1343995
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 34561832 tctccctccgctccgctcc 34561814 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 31375088 tctccctccgctccgctcc 31375106 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 23447318 tctccctccgctccgctcc 23447336 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 1267036 tctccctccgctccgctcc 1267054
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 38841830 tctccctccgctccgctcc 38841848 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 27799976 tctccctccgctccgctcc 27799994 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 13485441 tctccctccgctccgctcc 13485459 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 13475217 tctccctccgctccgctcc 13475235 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 3120749 tctccctccgctccgctcc 3120731
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 39401 tctccctccgctccgctcc 39419 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 29177 tctccctccgctccgctcc 29195
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 114712 tctccctccgctccgctcc 114730
>gb|AC079611.6| Homo sapiens BAC clone RP11-260J21 from 2, complete sequence Length = 180783 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 aacatggcaagaaagaccc 43 ||||||||||||||||||| Sbjct: 175668 aacatggcaagaaagaccc 175650
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 92031 tctccctccgctccgctcc 92049
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 57662 tctccctccgctccgctcc 57680
>dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B11 Length = 179858 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 141656 tctccctccgctccgctcc 141638
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 157036 tctccctccgctccgctcc 157054
>dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0006E02 Length = 141782 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 15724 tctccctccgctccgctcc 15742
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J13 Length = 152837 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 56071 tctccctccgctccgctcc 56089
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 64537 tctccctccgctccgctcc 64519
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 98127 tctccctccgctccgctcc 98145
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 6616 tctccctccgctccgctcc 6634
>dbj|AP005732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0014M19 Length = 129270 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 57807 tctccctccgctccgctcc 57825
>dbj|AP004280.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0648E08 Length = 135175 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 68036 tctccctccgctccgctcc 68018
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 155231 tctccctccgctccgctcc 155213
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 55187 tctccctccgctccgctcc 55169
>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0589E08 Length = 138416 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 119586 tctccctccgctccgctcc 119568
>dbj|AP005758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0433B06 Length = 126258 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 18857 tctccctccgctccgctcc 18839
>dbj|AB097478.1| Oryza sativa (japonica cultivar-group) transposon AnacB2 DNA, complete sequence Length = 4224 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 432 tctccctccgctccgctcc 450
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 13001 tctccctccgctccgctcc 13019
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 72772 tctccctccgctccgctcc 72754
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 28447 tctccctccgctccgctcc 28429
>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0025F03 Length = 138042 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 34607 tctccctccgctccgctcc 34589 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 19766 tctccctccgctccgctcc 19748
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 10485 tctccctccgctccgctcc 10503
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 41065 tctccctccgctccgctcc 41083
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 106136 tctccctccgctccgctcc 106118 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 91295 tctccctccgctccgctcc 91277
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 65993 tctccctccgctccgctcc 66011
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2556082 tctccctccgctccgctcc 2556100 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 2362267 tctccctccgctccgctcc 2362249
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 24271009 tctccctccgctccgctcc 24271027 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 1497144 tctccctccgctccgctcc 1497162 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 768286 tctccctccgctccgctcc 768304
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 86545 tctccctccgctccgctcc 86527
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tctccctccgctccgctcc 23 ||||||||||||||||||| Sbjct: 88789 tctccctccgctccgctcc 88771 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 497,716 Number of Sequences: 3902068 Number of extensions: 497716 Number of successful extensions: 34327 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 33583 Number of HSP's gapped (non-prelim): 744 length of query: 79 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 58 effective length of database: 17,151,101,840 effective search space: 994763906720 effective search space used: 994763906720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)