ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet50f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ERYA1_SACER (Q03131) Erythronolide synthase, modules 1 and 2 (EC... 32 0.63
2THIG_NOCFA (Q5YNQ2) Thiazole biosynthesis protein thiG 29 4.1
3JIP1_RAT (Q9R237) C-jun-amino-terminal kinase-interacting protei... 28 6.9
4JIP1_MOUSE (Q9WVI9) C-jun-amino-terminal kinase-interacting prot... 28 6.9

>ERYA1_SACER (Q03131) Erythronolide synthase, modules 1 and 2 (EC 2.3.1.94) (ORF|
           1) (6-deoxyerythronolide B synthase I) (DEBS 1)
          Length = 3491

 Score = 31.6 bits (70), Expect = 0.63
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 120 WTSAINDAAAGSPSDNALRRGHHIAQRPRPATCGSRHR 7
           WT+A +D         + RR      RP PA+ G+RHR
Sbjct: 375 WTAAYDDVGPNPALCRSSRRPRRKTSRPSPASTGTRHR 412



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>THIG_NOCFA (Q5YNQ2) Thiazole biosynthesis protein thiG|
          Length = 256

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 21  RRSPDAAAALCDG-RAGERCRSASRLPHR*WLRSTA 125
           +R P  AAA+ D  RAG   R A R+P R W ++++
Sbjct: 218 KRPPLMAAAMADAVRAGLLAREAGRIPKRFWAQASS 253



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>JIP1_RAT (Q9R237) C-jun-amino-terminal kinase-interacting protein 1|
           (JNK-interacting protein 1) (JIP-1) (JNK MAP kinase
           scaffold protein 1) (Islet-brain-1) (IB-1)
           (Mitogen-activated protein kinase 8-interacting protein
           1) (JIP-1-related protein) (JRP)
          Length = 708

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 105 NDAAAGSPSDNALRRGHHIAQRPRPATC 22
           N A+A SP ++A+   +  A +PRP TC
Sbjct: 412 NCASASSPYESAIGEEYEEAPQPRPPTC 439



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>JIP1_MOUSE (Q9WVI9) C-jun-amino-terminal kinase-interacting protein 1|
           (JNK-interacting protein 1) (JIP-1) (JNK MAP kinase
           scaffold protein 1) (Islet-brain-1) (IB-1)
           (Mitogen-activated protein kinase 8-interacting protein
           1)
          Length = 707

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 105 NDAAAGSPSDNALRRGHHIAQRPRPATC 22
           N A+A SP ++A+   +  A +PRP TC
Sbjct: 411 NCASASSPYESAIGEEYEEAPQPRPPTC 438


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,410,398
Number of Sequences: 219361
Number of extensions: 329417
Number of successful extensions: 915
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 80,573,946
effective HSP length: 25
effective length of database: 75,089,921
effective search space used: 1802158104
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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