ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet50e12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds Length = 1833 Score = 145 bits (73), Expect = 9e-32 Identities = 112/126 (88%) Strand = Plus / Plus Query: 159 gggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagccgcacg 218 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 722 gggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtcccgcagccgcacg 781 Query: 219 ccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatcaccgaggccacgg 278 ||||| | ||||| ||||||||||||| ||||| | |||||||| |||||||||| Sbjct: 782 gcgccgtctactacgcgcagcgcgccacccggggcggcctcctcatcactgaggccacgg 841 Query: 279 gcgtct 284 |||||| Sbjct: 842 gcgtct 847
>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete cds Length = 1409 Score = 111 bits (56), Expect = 1e-21 Identities = 107/125 (85%) Strand = Plus / Plus Query: 155 caccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagccg 214 ||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| Sbjct: 158 caccgggtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagcca 217 Query: 215 cacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatcaccgaggcc 274 |||||||||| || |||| ||||||||||||| || || |||||||| | |||||| Sbjct: 218 cacgccgccgtgtactactcgcagcgcgccaccaggggtggcctgctcatcgcggaggcc 277 Query: 275 acggg 279 ||||| Sbjct: 278 acggg 282
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 5e-21 Identities = 106/124 (85%) Strand = Plus / Minus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| Sbjct: 5925032 cccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagc 5924973 Query: 213 cgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 272 |||||||||| | || |||| ||||||||||||| |||||| | |||||| | |||| Sbjct: 5924972 cgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggagg 5924913 Query: 273 ccac 276 |||| Sbjct: 5924912 ccac 5924909 Score = 91.7 bits (46), Expect = 1e-15 Identities = 115/139 (82%) Strand = Plus / Minus Query: 146 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtg 205 |||||| ||||||| ||| |||| |||||| |||||||| || |||||||||| |||| Sbjct: 5891134 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 5891075 Query: 206 ccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatc 265 |||||||||||||| || || |||| ||||||||||||| |||||| | |||||| Sbjct: 5891074 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 5891015 Query: 266 accgaggccacgggcgtct 284 || |||||||| ||||||| Sbjct: 5891014 acggaggccaccggcgtct 5890996 Score = 87.7 bits (44), Expect = 2e-14 Identities = 116/141 (82%) Strand = Plus / Minus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| |||||||| |||||||| |||||| | ||||||||||||| || Sbjct: 5907009 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 5906950 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||| ||||||||| | || |||| ||||||||||||| |||||| | ||| Sbjct: 5906949 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 5906890 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 5906889 tcacggaggccaccggcgtct 5906869 Score = 79.8 bits (40), Expect = 4e-12 Identities = 60/67 (89%) Strand = Plus / Minus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 ||||||| |||||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 5930316 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 5930257 Query: 213 cgcacgc 219 ||||||| Sbjct: 5930256 cgcacgc 5930250 Score = 79.8 bits (40), Expect = 4e-12 Identities = 115/141 (81%) Strand = Plus / Minus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| ||| |||| ||||| |||||||| || |||||||||| || Sbjct: 5896806 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 5896747 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||||||||||||| || || |||| ||||||||||||| |||||| | |||| Sbjct: 5896746 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 5896687 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 5896686 tcacggaggccaccggcgtct 5896666 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/104 (81%) Strand = Plus / Minus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||| | || Sbjct: 5916622 tcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgccgctcctacgaccacg 5916563 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccacc 247 |||| ||||||||||| || || |||| ||||||||||||| Sbjct: 5916562 tgccacagccgcacgcggcgctgtactactcgcagcgcgccacc 5916519
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 109 bits (55), Expect = 5e-21 Identities = 106/124 (85%) Strand = Plus / Minus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| Sbjct: 46684 cccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagc 46625 Query: 213 cgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 272 |||||||||| | || |||| ||||||||||||| |||||| | |||||| | |||| Sbjct: 46624 cgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggagg 46565 Query: 273 ccac 276 |||| Sbjct: 46564 ccac 46561 Score = 91.7 bits (46), Expect = 1e-15 Identities = 115/139 (82%) Strand = Plus / Minus Query: 146 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtg 205 |||||| ||||||| ||| |||| |||||| |||||||| || |||||||||| |||| Sbjct: 12786 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 12727 Query: 206 ccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatc 265 |||||||||||||| || || |||| ||||||||||||| |||||| | |||||| Sbjct: 12726 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 12667 Query: 266 accgaggccacgggcgtct 284 || |||||||| ||||||| Sbjct: 12666 acggaggccaccggcgtct 12648 Score = 87.7 bits (44), Expect = 2e-14 Identities = 116/141 (82%) Strand = Plus / Minus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| |||||||| |||||||| |||||| | ||||||||||||| || Sbjct: 28661 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 28602 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||| ||||||||| | || |||| ||||||||||||| |||||| | ||| Sbjct: 28601 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 28542 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 28541 tcacggaggccaccggcgtct 28521 Score = 79.8 bits (40), Expect = 4e-12 Identities = 60/67 (89%) Strand = Plus / Minus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 ||||||| |||||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 51968 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 51909 Query: 213 cgcacgc 219 ||||||| Sbjct: 51908 cgcacgc 51902 Score = 79.8 bits (40), Expect = 4e-12 Identities = 115/141 (81%) Strand = Plus / Minus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| ||| |||| ||||| |||||||| || |||||||||| || Sbjct: 18458 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 18399 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||||||||||||| || || |||| ||||||||||||| |||||| | |||| Sbjct: 18398 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 18339 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 18338 tcacggaggccaccggcgtct 18318 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/104 (81%) Strand = Plus / Minus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||| | || Sbjct: 38274 tcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgccgctcctacgaccacg 38215 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccacc 247 |||| ||||||||||| || || |||| ||||||||||||| Sbjct: 38214 tgccacagccgcacgcggcgctgtactactcgcagcgcgccacc 38171
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 109 bits (55), Expect = 5e-21 Identities = 106/124 (85%) Strand = Plus / Minus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| Sbjct: 125807 cccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagc 125748 Query: 213 cgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 272 |||||||||| | || |||| ||||||||||||| |||||| | |||||| | |||| Sbjct: 125747 cgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggagg 125688 Query: 273 ccac 276 |||| Sbjct: 125687 ccac 125684 Score = 91.7 bits (46), Expect = 1e-15 Identities = 115/139 (82%) Strand = Plus / Minus Query: 146 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtg 205 |||||| ||||||| ||| |||| |||||| |||||||| || |||||||||| |||| Sbjct: 91909 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 91850 Query: 206 ccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatc 265 |||||||||||||| || || |||| ||||||||||||| |||||| | |||||| Sbjct: 91849 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 91790 Query: 266 accgaggccacgggcgtct 284 || |||||||| ||||||| Sbjct: 91789 acggaggccaccggcgtct 91771 Score = 87.7 bits (44), Expect = 2e-14 Identities = 116/141 (82%) Strand = Plus / Minus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| |||||||| |||||||| |||||| | ||||||||||||| || Sbjct: 107784 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 107725 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||| ||||||||| | || |||| ||||||||||||| |||||| | ||| Sbjct: 107724 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 107665 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 107664 tcacggaggccaccggcgtct 107644 Score = 79.8 bits (40), Expect = 4e-12 Identities = 60/67 (89%) Strand = Plus / Minus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 ||||||| |||||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 131091 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 131032 Query: 213 cgcacgc 219 ||||||| Sbjct: 131031 cgcacgc 131025 Score = 79.8 bits (40), Expect = 4e-12 Identities = 115/141 (81%) Strand = Plus / Minus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| ||| |||| ||||| |||||||| || |||||||||| || Sbjct: 97581 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 97522 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||||||||||||| || || |||| ||||||||||||| |||||| | |||| Sbjct: 97521 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 97462 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 97461 tcacggaggccaccggcgtct 97441 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/104 (81%) Strand = Plus / Minus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||| | || Sbjct: 117397 tcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgccgctcctacgaccacg 117338 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccacc 247 |||| ||||||||||| || || |||| ||||||||||||| Sbjct: 117337 tgccacagccgcacgcggcgctgtactactcgcagcgcgccacc 117294
>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete cds Length = 1465 Score = 103 bits (52), Expect = 3e-19 Identities = 106/125 (84%) Strand = Plus / Plus Query: 155 caccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagccg 214 ||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| Sbjct: 173 caccgggtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagcca 232 Query: 215 cacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatcaccgaggcc 274 |||||||||| || |||| |||||||||||| || || |||||||| | |||||| Sbjct: 233 cacgccgccgtgtactactcccagcgcgccaccaggggtggcctgctcatcgcggaggcc 292 Query: 275 acggg 279 ||||| Sbjct: 293 acggg 297
>gb|AY108052.1| Zea mays PCO079165 mRNA sequence Length = 1489 Score = 103 bits (52), Expect = 3e-19 Identities = 106/125 (84%) Strand = Plus / Plus Query: 155 caccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagccg 214 ||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| Sbjct: 195 caccgggtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagcca 254 Query: 215 cacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatcaccgaggcc 274 |||||||||| || |||| |||||||||||| || || |||||||| | |||||| Sbjct: 255 cacgccgccgtgtactactcccagcgcgccaccaggggtggcctgctcatcgcggaggcc 314 Query: 275 acggg 279 ||||| Sbjct: 315 acggg 319
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full insert sequence Length = 1281 Score = 95.6 bits (48), Expect = 7e-17 Identities = 117/141 (82%) Strand = Plus / Plus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| |||||||||||||||| ||||| |||||||| || |||||||||| || Sbjct: 153 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 212 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||||||||||||| || || |||| ||||||||||||| |||||| | |||| Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 273 tcacggaggccaccggcgtct 293
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full insert sequence Length = 1281 Score = 95.6 bits (48), Expect = 7e-17 Identities = 117/141 (82%) Strand = Plus / Plus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| |||||||||||||||| ||||| |||||||| || |||||||||| || Sbjct: 153 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 212 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||||||||||||| || || |||| ||||||||||||| |||||| | |||| Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 273 tcacggaggccaccggcgtct 293
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full insert sequence Length = 1422 Score = 95.6 bits (48), Expect = 7e-17 Identities = 117/141 (82%) Strand = Plus / Plus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| |||||||||||||||| ||||| |||||||| || |||||||||| || Sbjct: 148 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 207 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||||||||||||| || || |||| ||||||||||||| |||||| | |||| Sbjct: 208 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 267 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 268 tcacggaggccaccggcgtct 288
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full insert sequence Length = 1517 Score = 91.7 bits (46), Expect = 1e-15 Identities = 115/139 (82%) Strand = Plus / Plus Query: 146 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtg 205 |||||| ||||||| ||| |||| |||||| |||||||| || |||||||||| |||| Sbjct: 233 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 292 Query: 206 ccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatc 265 |||||||||||||| || || |||| ||||||||||||| |||||| | |||||| Sbjct: 293 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 352 Query: 266 accgaggccacgggcgtct 284 || |||||||| ||||||| Sbjct: 353 acggaggccaccggcgtct 371
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full insert sequence Length = 1311 Score = 87.7 bits (44), Expect = 2e-14 Identities = 116/141 (82%) Strand = Plus / Plus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| |||||||| |||||||| |||||| | ||||||||||||| || Sbjct: 156 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 215 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||| ||||||||| | || |||| ||||||||||||| |||||| | ||| Sbjct: 216 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 275 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 276 tcacggaggccaccggcgtct 296
>gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3) mRNA, complete cds Length = 1431 Score = 83.8 bits (42), Expect = 3e-13 Identities = 105/127 (82%) Strand = Plus / Plus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 ||||||| ||||||||||||||| |||||||| ||| || ||| ||||||||||| Sbjct: 138 cccaccgcgtggtgctggcgccgatgacgcggtgccgcgccatcggggacgtgccgcagc 197 Query: 213 cgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 272 |||||||||||| || |||| ||||||||||| | ||||| ||||||||||||||| Sbjct: 198 cgcacgccgccgtgtactactcgcagcgcgccagcaggggcggcgtgctcatcaccgagg 257 Query: 273 ccacggg 279 |||||| Sbjct: 258 gcacggg 264
>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic acid reductase (opda gene) Length = 1343 Score = 79.8 bits (40), Expect = 4e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 ||||||| |||||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 122 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 181 Query: 213 cgcacgc 219 ||||||| Sbjct: 182 cgcacgc 188
>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 gene for 12-oxo-phytodienoic acid reductase, complete cds Length = 2492 Score = 79.8 bits (40), Expect = 4e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 ||||||| |||||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 1136 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 1195 Query: 213 cgcacgc 219 ||||||| Sbjct: 1196 cgcacgc 1202
>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full insert sequence Length = 1520 Score = 79.8 bits (40), Expect = 4e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 ||||||| |||||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 188 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 247 Query: 213 cgcacgc 219 ||||||| Sbjct: 248 cgcacgc 254
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full insert sequence Length = 1434 Score = 79.8 bits (40), Expect = 4e-12 Identities = 115/141 (81%) Strand = Plus / Plus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| ||| |||| ||||| |||||||| || |||||||||| || Sbjct: 153 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 212 Query: 204 tgccgcagccgcacgccgccgngtnctacgggcagcgcgccaccgccggcgggatgctca 263 |||||||||||||||| || || |||| ||||||||||||| |||||| | |||| Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272 Query: 264 tcaccgaggccacgggcgtct 284 |||| |||||||| ||||||| Sbjct: 273 tcacggaggccaccggcgtct 293
>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase, complete cds Length = 1384 Score = 79.8 bits (40), Expect = 4e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 153 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancgtgccgcagc 212 ||||||| |||||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 160 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 219 Query: 213 cgcacgc 219 ||||||| Sbjct: 220 cgcacgc 226
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full insert sequence Length = 1295 Score = 63.9 bits (32), Expect = 3e-07 Identities = 55/63 (87%) Strand = Plus / Plus Query: 144 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcancg 203 |||| ||| ||||||| |||||||| |||||||| |||||| | ||||||||||||| || Sbjct: 157 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 216 Query: 204 tgc 206 ||| Sbjct: 217 tgc 219
>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds Length = 1594 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 148 cctcgcccaccgggtggtgctggcgccgctgac 180 |||||||||||||||||||||||||||| |||| Sbjct: 326 cctcgcccaccgggtggtgctggcgccgatgac 358
>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for oxo-phytodienoic acid reductase (opda2 gene) Length = 1248 Score = 58.0 bits (29), Expect = 2e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 188 cgctcctacggcancgtgccgcagccgcacgc 219 ||||||||||||| |||||||||||||||||| Sbjct: 1 cgctcctacggcaacgtgccgcagccgcacgc 32
>ref|XM_482784.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1531 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 154 ccaccgggtggtgctggcgccgctgacgcgg 184 |||||||||||||||||||||| |||||||| Sbjct: 205 ccaccgggtggtgctggcgccgatgacgcgg 235
>ref|XM_507257.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.35 mRNA Length = 1560 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 154 ccaccgggtggtgctggcgccgctgacgcgg 184 |||||||||||||||||||||| |||||||| Sbjct: 220 ccaccgggtggtgctggcgccgatgacgcgg 250
>dbj|AK104843.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G07, full insert sequence Length = 1531 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 154 ccaccgggtggtgctggcgccgctgacgcgg 184 |||||||||||||||||||||| |||||||| Sbjct: 205 ccaccgggtggtgctggcgccgatgacgcgg 235
>dbj|AK071203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083E07, full insert sequence Length = 1560 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 154 ccaccgggtggtgctggcgccgctgacgcgg 184 |||||||||||||||||||||| |||||||| Sbjct: 220 ccaccgggtggtgctggcgccgatgacgcgg 250
>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete cds Length = 1529 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 148 cctcgcccaccgggtggtgctggcgccgctgac 180 |||||| ||||||||||||||||||||| |||| Sbjct: 190 cctcgcgcaccgggtggtgctggcgccgatgac 222
>gb|AE011767.1| Xanthomonas axonopodis pv. citri str. 306, section 145 of 469 of the complete genome Length = 11162 Score = 46.1 bits (23), Expect = 0.061 Identities = 30/33 (90%) Strand = Plus / Minus Query: 221 gccgngtnctacgggcagcgcgccaccgccggc 253 |||| || |||||| |||||||||||||||||| Sbjct: 9266 gccgagtactacggccagcgcgccaccgccggc 9234
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 159 gggtggtgctggcgccgctgacgcgg 184 ||||||||||||||||| |||||||| Sbjct: 22540279 gggtggtgctggcgccgatgacgcgg 22540304
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 159 gggtggtgctggcgccgctgacgcgg 184 ||||||||||||||||| |||||||| Sbjct: 13780 gggtggtgctggcgccgatgacgcgg 13805
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 159 gggtggtgctggcgccgctgacgcgg 184 ||||||||||||||||| |||||||| Sbjct: 135207 gggtggtgctggcgccgatgacgcgg 135232
>gb|AF506421.1| Gloeocystidiellum luridum strain HK9808 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 1270 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 145 agtccaagcccagccctctcatgac 121
>gb|DQ185924.1| Hericium erinaceum strain CBS 204.76 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|DQ185922.1| Hericium erinaceum strain CBS 260.74 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|DQ185921.1| Hericium erinaceum strain CBS 233.87 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 633 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|DQ185920.1| Hericium erinaceum strain ATCC 56457 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|AY534596.1| Hericium erinaceum strain KUMC e1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|AY534583.1| Hericium erinaceum strain CBS 485.95 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|AY534582.1| Hericium coralloides strain IFO 7716 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|AY534581.1| Hericium americanum strain CBS 493.63 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 tgctggcgccgctgacgcggc 185 ||||||||||||||||||||| Sbjct: 2318269 tgctggcgccgctgacgcggc 2318249
>gb|AF287980.1|AF287980 Hericium americanum internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 544 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 385 agtccaagcccagccctctcatgac 361
>gb|AF287978.1|AF287978 Hericium alpestre internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 543 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 384 agtccaagcccagccctctcatgac 360
>gb|AF173216.1|AF173216 Hericium coralloides internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA, complete sequence; and internal transcribed spacer 2, partial sequence Length = 543 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 agtccaagcccatccctctcatgac 120 |||||||||||| |||||||||||| Sbjct: 384 agtccaagcccagccctctcatgac 360
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cgggtggtgctggcgccgctg 178 ||||||||||||||||||||| Sbjct: 4698462 cgggtggtgctggcgccgctg 4698442
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 cctcgacctcgcccaccgggtggtg 166 |||| |||||||||||||||||||| Sbjct: 1821992 cctctacctcgcccaccgggtggtg 1821968
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tggtgctggcgccgctgacg 181 |||||||||||||||||||| Sbjct: 2631980 tggtgctggcgccgctgacg 2631961
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gtggtgctggcgccgctgac 180 |||||||||||||||||||| Sbjct: 638073 gtggtgctggcgccgctgac 638054
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 tacgggcagcgcgccaccgccggc 253 ||||| |||||||||||||||||| Sbjct: 1597026 tacggccagcgcgccaccgccggc 1597003
>ref|XM_391385.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11209.1) partial mRNA Length = 2694 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 ggagcctgaggccgagtccaagcc 105 |||||||||||| ||||||||||| Sbjct: 1518 ggagcctgaggctgagtccaagcc 1541
>emb|AL353753.6| Human DNA sequence from clone RP11-477G9 on chromosome 9, complete sequence Length = 178965 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tggatccctccacctccatc 33 |||||||||||||||||||| Sbjct: 133821 tggatccctccacctccatc 133840
>emb|AL133381.6| Human DNA sequence from clone RP3-406H21 on chromosome X Contains the 5' end of the IL1RAPL2 gene for interleukin 1 receptor accessory protein-like 2 and a CpG island, complete sequence Length = 43577 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tataaattaatggatccctc 23 |||||||||||||||||||| Sbjct: 42685 tataaattaatggatccctc 42666
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 cgccggcgggatgctcatcaccga 270 ||||||||| |||||||||||||| Sbjct: 101228 cgccggcggcatgctcatcaccga 101205
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 cgccggcgggatgctcatcaccga 270 ||||||||| |||||||||||||| Sbjct: 178912 cgccggcggcatgctcatcaccga 178935
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 cgccggcgggatgctcatcaccga 270 ||||||||| |||||||||||||| Sbjct: 737 cgccggcggcatgctcatcaccga 760
>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence Length = 31310 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggtggtgctggcgccgctga 179 |||||||||||||||||||| Sbjct: 7606 ggtggtgctggcgccgctga 7625
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 tacgggcagcgcgccaccgccggc 253 ||||| |||||||||||||||||| Sbjct: 1981827 tacggccagcgcgccaccgccggc 1981804
>gb|AE005885.1| Caulobacter crescentus CB15 section 211 of 359 of the complete genome Length = 11024 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 156 accgggtggtgctggcgccgctgacgcg 183 ||||||||||| |||||||| ||||||| Sbjct: 8768 accgggtggtgatggcgccgatgacgcg 8741
>gb|AE005721.1| Caulobacter crescentus CB15 section 47 of 359 of the complete genome Length = 12858 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 accgggtggtgctggcgccg 175 |||||||||||||||||||| Sbjct: 3253 accgggtggtgctggcgccg 3272
>gb|AE012121.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 29 of 460 of the complete genome Length = 10770 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggtgctggcgccgctgacgc 182 |||||||||||||||||||| Sbjct: 9676 ggtgctggcgccgctgacgc 9695
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggtgctggcgccgctgacgc 182 |||||||||||||||||||| Sbjct: 319833 ggtgctggcgccgctgacgc 319852
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tggatccctccacctccatc 33 |||||||||||||||||||| Sbjct: 993294 tggatccctccacctccatc 993313
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 tacgggcagcgcgccaccgccggc 253 ||||| |||||||||||||||||| Sbjct: 2003860 tacggccagcgcgccaccgccggc 2003837
>gb|AC114627.8| Mus musculus chromosome 3, clone RP24-108F9, complete sequence Length = 152152 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ccaagcccatccctctcatg 118 |||||||||||||||||||| Sbjct: 78153 ccaagcccatccctctcatg 78172 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,007,750 Number of Sequences: 3902068 Number of extensions: 2007750 Number of successful extensions: 39477 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38640 Number of HSP's gapped (non-prelim): 831 length of query: 286 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 264 effective length of database: 17,147,199,772 effective search space: 4526860739808 effective search space used: 4526860739808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
