Clone Information

BLAST Search Result

Clone Name	baet50e08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	116	2e-26
2	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	51	9e-07
3	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	50	3e-06
4	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	50	3e-06
5	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	49	6e-06
6	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	49	6e-06
7	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	49	6e-06
8	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	48	8e-06
9	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	48	8e-06
10	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	47	1e-05
11	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	47	1e-05
12	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	47	1e-05
13	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	47	2e-05
14	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	47	2e-05
15	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	47	2e-05
16	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	47	2e-05
17	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	47	2e-05
18	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	47	2e-05
19	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	47	2e-05
20	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	47	2e-05
21	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	46	3e-05
22	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	46	3e-05
23	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	46	3e-05
24	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	46	3e-05
25	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	46	3e-05
26	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	46	3e-05
27	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	46	3e-05
28	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	46	3e-05
29	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	46	3e-05
30	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	46	3e-05
31	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	46	3e-05
32	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	46	3e-05
33	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	46	3e-05
34	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	46	3e-05
35	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	46	3e-05
36	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	46	3e-05
37	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	45	5e-05
38	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	45	5e-05
39	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	45	7e-05
40	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	45	9e-05
41	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	45	9e-05
42	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	44	1e-04
43	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	44	1e-04
44	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	44	1e-04
45	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	44	2e-04
46	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	43	3e-04
47	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	43	3e-04
48	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	43	3e-04
49	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	43	3e-04
50	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	43	3e-04
51	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	43	3e-04
52	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	43	3e-04
53	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	43	3e-04
54	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	43	3e-04
55	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	42	6e-04
56	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	42	6e-04
57	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	42	6e-04
58	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	42	7e-04
59	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	42	7e-04
60	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	40	0.002
61	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	40	0.002
62	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	38	0.011
63	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	37	0.023
64	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	37	0.023
65	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	36	0.031
66	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	36	0.040
67	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	34	0.15
68	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	33	0.26
69	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	33	0.34
70	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	32	0.44
71	UBIE_PORGI (Q7MVR7) Menaquinone biosynthesis methyltransferase u...	30	2.2
72	NLPD_SALTY (P40827) Lipoprotein nlpD precursor	30	2.2
73	NLPD_SALTI (Q56131) Lipoprotein nlpD precursor	30	2.2
74	NLPD_SALDU (P39700) Lipoprotein nlpD precursor	30	2.2
75	INLA_LISMF (Q723K6) Internalin A precursor	29	3.7
76	PTW3C_BACSU (P39816) Putative PTS system glucosamine-specific EI...	29	4.9
77	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	28	6.4
78	INLA_LISMO (P25146) Internalin A precursor	28	6.4
79	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	28	6.4
80	NLPD_SHIFL (P0ADA4) Lipoprotein nlpD precursor	28	8.3
81	NLPD_ECOLI (P0ADA3) Lipoprotein nlpD precursor	28	8.3
82	C8AP2_HUMAN (Q9UKL3) CASP8-associated protein 2 (FLICE-associate...	28	8.3
83	ALB32_ARATH (Q8L718) Inner membrane ALBINO3-like protein 2, chlo...	28	8.3

>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score =  116 bits (290), Expect = 2e-26
 Identities = 61/110 (55%), Positives = 74/110 (67%)
 Frame = +2

Query: 86  MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAG 265
           MA+L  ++MLGT L+F   SR  ++AP A +         F+           V+ +S  
Sbjct: 1   MASLGVSEMLGTPLNFRAVSR--SSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETS-- 56

Query: 266 IDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
             DELAKWYGPDRRI+LP+GLLDRSE+PEYLNGEV GDYGYDPFGLGKKP
Sbjct: 57  --DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKP 104

to top

>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 32/88 (36%), Positives = 38/88 (43%)
 Frame = +2

Query: 152 ATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLL 331
           A+ A TA +  +V                  VA  SA        WYGPDR  YL     
Sbjct: 2   ASMAATASSTTVVKATPFLGQTKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPF-- 59

Query: 332 DRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
             ++ P YLNGE PGDYG+D  GL   P
Sbjct: 60  -SAQTPSYLNGEFPGDYGWDTAGLSADP 86

to top

>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 25/43 (58%), Positives = 27/43 (62%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR +YL  G L   E P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 25/43 (58%), Positives = 27/43 (62%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR +YL  G L   E P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 22/44 (50%), Positives = 28/44 (63%)
 Frame = +2

Query: 284 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           ++YGPDR  +L  G    ++ PEYL GE PGDYG+D  GL   P
Sbjct: 32  EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADP 73

to top

>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 23/43 (53%), Positives = 26/43 (60%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL       ++ P YLNGE PGDYG+D  GL   P
Sbjct: 50  WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADP 89

to top

>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 26/53 (49%), Positives = 30/53 (56%)
 Frame = +2

Query: 257 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           +A ID   + WYGPDR +YL        E P YL GE PGDYG+D  GL   P
Sbjct: 55  AASID---SPWYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADP 101

to top

>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 26/53 (49%), Positives = 30/53 (56%)
 Frame = +2

Query: 257 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           +A ID   + WYGPDR +YL        E P YL GE PGDYG+D  GL   P
Sbjct: 55  AASID---SPWYGPDRVMYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADP 101

to top

>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 23/43 (53%), Positives = 25/43 (58%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR +YL        E P YL GE PGDYG+D  GL   P
Sbjct: 58  WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADP 97

to top

>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 22/43 (51%), Positives = 25/43 (58%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        ++P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGPDRPKYLGPF---SEQIPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 22/43 (51%), Positives = 25/43 (58%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        ++P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGPDRPKYLGPF---SDQIPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 26/55 (47%), Positives = 29/55 (52%)
 Frame = +2

Query: 251 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           T  A + D  + WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 38  TVKAPVSD--SPWYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADP 87

to top

>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 50  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADP 89

to top

>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 50  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADP 89

to top

>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADP 90

to top

>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADP 90

to top

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 24/43 (55%), Positives = 26/43 (60%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR +YL  G L   E P YL GE PGDYG+D  GL   P
Sbjct: 50  WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 89

to top

>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 33/92 (35%), Positives = 39/92 (42%)
 Frame = +2

Query: 140 SSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLP 319
           +S  A ++P AG  K V L    +              S A      + WYGPDR  YL 
Sbjct: 3   ASTTALSSPFAG--KAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60

Query: 320 NGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
                  E P YL GE PGDYG+D  GL   P
Sbjct: 61  PF---SGESPSYLTGEFPGDYGWDTAGLSADP 89

to top

>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 24/43 (55%), Positives = 26/43 (60%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR +YL  G L   E P YL GE PGDYG+D  GL   P
Sbjct: 45  WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 84

to top

>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 24/43 (55%), Positives = 26/43 (60%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR +YL  G L   E P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 29  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADP 68

to top

>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 47  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADP 86

to top

>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 22/43 (51%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        + P YL GE PGDYG+D  GL   P
Sbjct: 47  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADP 86

to top

>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 48  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 87

to top

>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 52  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 91

to top

>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 39  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADP 78

to top

>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 22/43 (51%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        + P YL GE PGDYG+D  GL   P
Sbjct: 48  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADP 87

to top

>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 53  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 92

to top

>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 46  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADP 85

to top

>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 50  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 89

to top

>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 90

to top

>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 90

to top

>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 90

to top

>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 90

to top

>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 24/43 (55%), Positives = 26/43 (60%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR +YL  G L  S  P YL GE PGDYG+D  GL   P
Sbjct: 48  WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADP 87

to top

>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 25/53 (47%), Positives = 29/53 (54%)
 Frame = +2

Query: 257 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           SAGI+     WYGPDR  +L       +  P YL GE PGDYG+D  GL   P
Sbjct: 34  SAGIE-----WYGPDRAKWLGPF---STNTPAYLTGEFPGDYGWDTAGLSADP 78

to top

>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 23/43 (53%), Positives = 26/43 (60%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR +YL  G    S  P YL+GE PGDYG+D  GL   P
Sbjct: 49  WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADP 88

to top

>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +2

Query: 296 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           PDR ++ P      S  PE+L+G +PGD+G+DP GLG  P
Sbjct: 63  PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDP 97

to top

>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 22/43 (51%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE P DYG+D  GL   P
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPSDYGWDTAGLSADP 90

to top

>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 22/43 (51%), Positives = 24/43 (55%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGP+R  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 51  WYGPNRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 90

to top

>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 22/43 (51%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL        E P YL GE PGDYG+D   L   P
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAELSADP 90

to top

>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +2

Query: 281 AKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGK 409
           AK    DR ++ P      ++ PEYL+G + GDYG+DPFGLGK
Sbjct: 45  AKTVISDRPLWFPG-----AKSPEYLDGSLVGDYGFDPFGLGK 82

to top

>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = +2

Query: 347 PEYLNGEVPGDYGYDPFGLGKKP 415
           PE+L+G +PGDYG+DP GLGK P
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDP 90

to top

>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 22/43 (51%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGSDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 22/43 (51%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 50  WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 89

to top

>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 22/43 (51%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR  YL        E P YL GE PGDYG+D  GL   P
Sbjct: 50  WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 89

to top

>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 23/56 (41%), Positives = 31/56 (55%)
 Frame = +2

Query: 248 ATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           A  S+G++     +YGP+R  +L  G    +  P YL GE PGDYG+D  GL   P
Sbjct: 28  APKSSGVE-----FYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADP 76

to top

>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR  YL        + P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR  YL        + P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR  YL        + P YL GE PGDYG+D  GL   P
Sbjct: 49  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADP 88

to top

>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 25/55 (45%), Positives = 28/55 (50%)
 Frame = +2

Query: 251 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           + SAG D     WYG DR  +L        E P YLNGE  GDYG+D  GL   P
Sbjct: 43  SKSAGSD---TIWYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDP 91

to top

>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR  YL        + P YL GE PGDYG+D  GL   P
Sbjct: 21  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADP 60

to top

>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYGPDR  YL  G       P YL GE PGDYG+D   +   P
Sbjct: 50  WYGPDRPKYL--GPFSEG-TPSYLTGEFPGDYGWDTAAVSADP 89

to top

>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = +2

Query: 347 PEYLNGEVPGDYGYDPFGLGKKP 415
           PE+L+G +PGD+G+DP GLGK P
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDP 90

to top

>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = +2

Query: 347 PEYLNGEVPGDYGYDPFGLGKKP 415
           PE+L+G +PGD+G+DP GLGK P
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDP 95

to top

>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 20/43 (46%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           WYG DR  +L        + P YL GE PGDYG+D  GL   P
Sbjct: 48  WYGADRPKFLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADP 87

to top

>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           W+GPD   YL        E P YL GE PGDYG+D  GL   P
Sbjct: 12  WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADP 51

to top

>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +2

Query: 296 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           PDR ++ P      S  P +L+G +PGD+G+DP GL   P
Sbjct: 63  PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDP 97

to top

>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +2

Query: 299 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGK 409
           DR ++ P  +      P++L+G + GDYG+DPFGLGK
Sbjct: 54  DRPLWYPGAIS-----PDWLDGSLVGDYGFDPFGLGK 85

to top

>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +2

Query: 299 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGK 409
           DR ++ P      +  PE+L+G + GD G+DPFGLGK
Sbjct: 55  DRLVWFPG-----ANPPEWLDGSMIGDRGFDPFGLGK 86

to top

>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 36.6 bits (83), Expect = 0.023
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 347 PEYLNGEVPGDYGYDPFGLGKKP 415
           P YL+G  PGD+G+D  GLG+ P
Sbjct: 56  PSYLDGSAPGDFGFDSLGLGEVP 78

to top

>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 36.6 bits (83), Expect = 0.023
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = +2

Query: 341 EVPEYLNGEVPGDYGYDPFGLGKKP 415
           E P YL GE PGDYG+D  GL   P
Sbjct: 5   EPPSYLTGEFPGDYGWDTAGLSADP 29

to top

>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +2

Query: 308 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGK 409
           ++LPN     +  PE+L+G +PGD G+DP GL K
Sbjct: 51  LWLPN-----TTRPEWLDGSLPGDRGFDPLGLSK 79

to top

>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 35.8 bits (81), Expect = 0.040
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = +2

Query: 341 EVPEYLNGEVPGDYGYDPFGLGKKP 415
           E P YL GE PGDYG+D  GL   P
Sbjct: 68  EWPSYLTGEFPGDYGWDTAGLSAYP 92

to top

>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 33.9 bits (76), Expect = 0.15
 Identities = 22/71 (30%), Positives = 30/71 (42%)
 Frame = +2

Query: 203 RFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDY 382
           R N             TSS  ++ +  +W        LP GL      P+YL G + GD 
Sbjct: 29  RLNRDLSFTSIGSSAKTSSFKVEAKKGEW--------LP-GLAS----PDYLTGSLAGDN 75

Query: 383 GYDPFGLGKKP 415
           G+DP GL + P
Sbjct: 76  GFDPLGLAEDP 86

to top

>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 299 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           +R ++ PN +      P YL GE  GD G+DP GL   P
Sbjct: 370 ERELWFPNIV-----PPRYLTGEAYGDKGFDPAGLAADP 403



 Score = 33.1 bits (74), Expect = 0.26
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 308 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           ++ PN L      P +LNGE  GD G+DP GL   P
Sbjct: 4   LWFPNTL-----APSWLNGEYYGDRGFDPAGLAADP 34



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 308 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           ++ PN     +E P  L GE P D G+DP  L   P
Sbjct: 189 LWFPN-----AEPPALLTGEYPADRGFDPLNLAADP 219

to top

>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 32.7 bits (73), Expect = 0.34
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 353 YLNGEVPGDYGYDPFGL 403
           YL+G +PGD+G+DP GL
Sbjct: 65  YLDGRLPGDFGFDPLGL 81

to top

>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 284 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKP 415
           ++YGPD      +G   + + P    GE PGDYG+D  GL   P
Sbjct: 56  QFYGPDAT----SGWDLQHQHPRLPTGEFPGDYGWDTAGLSADP 95

to top

>UBIE_PORGI (Q7MVR7) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 245

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -1

Query: 388 VAVVSGNLAVEVLRHLRPVKEAVGQVDPPVRAVPLGE 278
           VA  +G+LA+E+ RH+  VK+  G VD  +  + +GE
Sbjct: 65  VATGTGDLAIEICRHIPSVKQVTG-VDLSLEMMRIGE 100

to top

>NLPD_SALTY (P40827) Lipoprotein nlpD precursor|
          Length = 377

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 276 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 365
           N P+GT +T   T PT S T     STST+
Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252

to top

>NLPD_SALTI (Q56131) Lipoprotein nlpD precursor|
          Length = 373

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 276 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 365
           N P+GT +T   T PT S T     STST+
Sbjct: 219 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 248

to top

>NLPD_SALDU (P39700) Lipoprotein nlpD precursor|
          Length = 377

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 276 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 365
           N P+GT +T   T PT S T     STST+
Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252

to top

>INLA_LISMF (Q723K6) Internalin A precursor|
          Length = 800

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 276 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 392
           N+P  T   G +T P+A++ G    +TST     TT+T+
Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSNTSNTSTGNSASTTSTM 754

to top

>PTW3C_BACSU (P39816) Putative PTS system glucosamine-specific EIICBA component|
           [Includes: Glucosamine permease IIC component (PTS
           system glucosamine-specific EIIC component);
           Glucosamine-specific phosphotransferase enzyme IIB
           component (EC 2.7.1.69) (PTS
          Length = 631

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 186 IFCAPAVGAAVAYLEEPAKSSRVPSILVGAS 94
           IFC PAV  A+ +   P K   +  +++ A+
Sbjct: 252 IFCLPAVALAIIHTARPEKKKMISGVMISAA 282

to top

>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 338 SEVPEYLNGEVPGDYGYDPFGLGKKP 415
           ++ P +L GE P D G+DP  +   P
Sbjct: 166 AQPPAHLTGEYPADRGFDPLSVAADP 191

to top

>INLA_LISMO (P25146) Internalin A precursor|
          Length = 800

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 276 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 392
           N+P  T   G +T P+A++ G    +TST     TT+T+
Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTM 754

to top

>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = +2

Query: 287 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPG 376
           WYGPDR  YL        E P YL GE  G
Sbjct: 48  WYGPDRVKYLGP---FSGEAPSYLTGEFHG 74

to top

>NLPD_SHIFL (P0ADA4) Lipoprotein nlpD precursor|
          Length = 379

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 276 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 365
           N P+ T +T   T PTAS T     STST+
Sbjct: 225 NKPTATTVTAPVTVPTASTTEPTVSSTSTS 254

to top

>NLPD_ECOLI (P0ADA3) Lipoprotein nlpD precursor|
          Length = 379

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 276 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 365
           N P+ T +T   T PTAS T     STST+
Sbjct: 225 NKPTATTVTAPVTVPTASTTEPTVSSTSTS 254

to top

>C8AP2_HUMAN (Q9UKL3) CASP8-associated protein 2 (FLICE-associated huge protein)|
          Length = 1982

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 352 LRHLRPVKEAVGQVDPPVRAV 290
           L HLRP+ EA+  ++ PVR V
Sbjct: 847 LNHLRPIPEAISPLNSPVRPV 867

to top

>ALB32_ARATH (Q8L718) Inner membrane ALBINO3-like protein 2, chloroplast|
          precursor (Ath5)
          Length = 525

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 1  THHILPSC*AEHAPLLHAPSPS 66
          +HH+ PS    H+P L +PSPS
Sbjct: 23 SHHLKPSSFISHSPPLFSPSPS 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,929,096
Number of Sequences: 219361
Number of extensions: 741132
Number of successful extensions: 2637
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 2533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2596
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result