ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet50e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476018.1| Oryza sativa (japonica cultivar-group), predic... 258 1e-65
2dbj|AK071333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 1e-65
3gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
5gb|AC136229.3| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
6dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone... 52 0.001
7gb|AF305070.2|AF305070 Chlamydomonas reinhardtii DEAH-box RNA he... 48 0.023
8gb|AC002040.1|HUAC002040 Homo sapiens Chromosome 16 BAC clone CI... 44 0.35
9emb|AL513327.34| Human DNA sequence from clone RP11-415J8 on chr... 44 0.35
10gb|AC127459.3| Homo sapiens chromosome 16 clone RP11-20G6, compl... 44 0.35
11emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 44 0.35
12dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 44 0.35
13dbj|AP001616.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 44 0.35
14dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 44 0.35
15ref|XM_463965.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
16emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005... 42 1.4
17emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.4
18dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.4
19gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosom... 42 1.4
20gb|BC096840.1| Homo sapiens histamine receptor H3, mRNA (cDNA cl... 42 1.4
21dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
25dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
26dbj|AP004030.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
27dbj|AK103476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
28emb|AJ278250.1|HSA278250 Homo sapiens HRH3 gene for histamine H3... 42 1.4
29emb|AJ296652.1|HSA296652 Homo sapiens HRH3 gene for histamine h3... 42 1.4
30gb|AY104298.1| Zea mays PCO095355 mRNA sequence 42 1.4
31gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.4
32dbj|AB045369.1| Homo sapiens mRNA for histamine H3 receptor HH3R... 42 1.4
33dbj|AB019000.1| Homo sapiens mRNA for G-protein coupled receptor... 42 1.4
34ref|NM_103884.2| Arabidopsis thaliana CLPR1; endopeptidase Clp A... 40 5.5
35ref|NM_188626.1| Oryza sativa (japonica cultivar-group), Ozsa822... 40 5.5
36ref|NM_185610.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
37ref|NM_192094.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
38ref|XM_526292.1| PREDICTED: Pan troglodytes similar to beta-1,4-... 40 5.5
39gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome... 40 5.5
40gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.5
41gb|AY659218.1| Synthetic construct Peudomonas aeruginosa clone F... 40 5.5
42gb|AC183103.2| Pan troglodytes BAC clone CH251-712L4 from chromo... 40 5.5
43gb|AC005164.2| Homo sapiens BAC clone CTB-135C18 from 7, complet... 40 5.5
44ref|XM_533061.2| PREDICTED: Canis familiaris similar to Calgizza... 40 5.5
45emb|X14855.1|TTV1TP Thermoproteus tenax virus 1 (TTV1) genome 40 5.5
46emb|X14717.1|TTV1VP Thermoproteus tenax virus 1 viral protein TP... 40 5.5
47ref|XM_844459.1| PREDICTED: Canis familiaris similar to brain an... 40 5.5
48gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold 40 5.5
49emb|AL691464.4| Human DNA sequence from clone RP4-644F6 on chrom... 40 5.5
50ref|NM_007939.1| Mus musculus Eph receptor A8 (Epha8), mRNA 40 5.5
51emb|AL139130.28| Human DNA sequence from clone RP11-139I14 on ch... 40 5.5
52gb|BT000572.1| Arabidopsis thaliana nClpP5, putative (At1g49970... 40 5.5
53gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome 40 5.5
54emb|X59290.1|RNEEKR Rat eek mRNA for eph and elk-related kinase 40 5.5
55gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, ... 40 5.5
56dbj|AK220393.1| Mus musculus mRNA for mKIAA1459 protein 40 5.5
57gb|AC087481.9| Homo sapiens chromosome 15, clone RP11-540B6, com... 40 5.5
58gb|AC003684.1| Homo sapiens X BAC GS1-519E5 (Genome Systems Huma... 40 5.5
59gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 5.5
60dbj|AK124870.1| Homo sapiens cDNA FLJ42880 fis, clone BRHIP3003916 40 5.5
61dbj|AK124566.1| Homo sapiens cDNA FLJ42575 fis, clone BRACE3008237 40 5.5
62dbj|AK094493.1| Homo sapiens cDNA FLJ37174 fis, clone BRACE2028406 40 5.5
63gb|AC023494.31| Homo sapiens 3 BAC RP11-59M4 (Roswell Park Cance... 40 5.5
64dbj|AK091014.1| Homo sapiens cDNA FLJ33695 fis, clone BRAWH2003662 40 5.5
65gb|AC024947.5| Homo sapiens chromosome 01 clone RP11-200I10, com... 40 5.5
66ref|XM_944081.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 5.5
67gb|AF426435.1|AF426435 Sus scrofa double-sex and mab-related tra... 40 5.5
68gb|AC008774.7| Homo sapiens chromosome 5 clone CTD-2018M7, compl... 40 5.5
69gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.5
70gb|AC034245.5| Homo sapiens chromosome 5 clone RP11-155L15, comp... 40 5.5
71gb|AY045677.1| Arabidopsis thaliana At1g49970/F2J10_5 mRNA, comp... 40 5.5
72gb|AC016638.9| Homo sapiens chromosome 5 clone RP11-365H8, compl... 40 5.5
73dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
74gb|AC092903.11| Homo sapiens 3 BAC RP11-666A20 (Roswell Park Can... 40 5.5
75gb|AC091043.12| Homo sapiens chromosome 18, clone RP11-595B24, c... 40 5.5
76gb|AC108733.4| Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cance... 40 5.5
77ref|NM_214111.1| Sus scrofa doublesex and mab-3 related transcri... 40 5.5
78gb|AE004632.1| Pseudomonas aeruginosa PAO1, section 193 of 529 o... 40 5.5
79gb|AY086911.1| Arabidopsis thaliana clone 29389 mRNA, complete s... 40 5.5
80ref|XM_342952.2| PREDICTED: Rattus norvegicus eph and elk-relate... 40 5.5
81dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
82dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
83dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
84gb|AF216651.1| Sus scrofa doublesex and mab-3 related transcript... 40 5.5
85dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
86dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
87dbj|AB022330.1| Arabidopsis thaliana mRNA for nClpP5 (nuclear en... 40 5.5
88gb|AC004460.1|AC004460 Homo sapiens PAC clone RP5-1086D14, compl... 40 5.5
89dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
90dbj|AK099190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
91emb|Z64519.1|HS133A9F H.sapiens CpG island DNA genomic Mse1 frag... 40 5.5
92dbj|AK069592.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
93emb|AJ965540.1| Alternanthera yellow vein virus, complete genome... 40 5.5
94gb|AY104631.1| Zea mays PCO147208 mRNA sequence 40 5.5
95gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.5
96emb|AM050736.1| Alternanthera yellow vein virus complete genome,... 40 5.5
97gb|AC133097.3| Mus musculus BAC clone RP23-287O2 from 1, complet... 40 5.5
98gb|U72207.1|MMU72207 Mus musculus Eph-and Elk-related kinase (ee... 40 5.5
99gb|AC164092.3| Mus musculus BAC clone RP23-366E4 from chromosome... 40 5.5
100emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on ch... 40 5.5
101emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on ch... 40 5.5 
>ref|XM_476018.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1161

 Score =  258 bits (130), Expect = 1e-65
 Identities = 187/206 (90%)
 Strand = Plus / Plus

                                                                       
Query: 205 cgaccacatccccaagcagttccgcgaggagaacctcaaggatggcctgatggataatta 264
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 162 cgaccacatccccaagcagttccgcgaggagaacctcaaagatggcctgatggataatta 221

                                                                       
Query: 265 caagaatgttcctcagttcctttatggcttaagcccatctcagatggaaatgtttatgac 324
           ||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||| 
Sbjct: 222 caagaatgttcctcaattcctttatggcttaagccctgctcagatcgaaatgtttatgaa 281

                                                                       
Query: 325 cgacaacaacccttataatcggctgtcacagaaagttacagaggaaagcatttctgcttt 384
           |||  | || || ||| ||||||  ||||||| |||||||||||||||||||||||||| 
Sbjct: 282 cgatgataatccatatgatcggcaatcacagagagttacagaggaaagcatttctgcttc 341

                                     
Query: 385 gaggagttatgatgaatttggtatgt 410
            ||||| |||||||||||||| ||||
Sbjct: 342 taggagctatgatgaatttggcatgt 367



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                 
Query: 41 atggcgctcgcgctgcgctgccccgccgccgcctcgccg 79
          ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1  atggcgctcgcgctgcgctgccccgccgctgcctcgccg 39



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 132 cgaggctcccgaggaggccg 151
           ||||||||||||||||||||
Sbjct: 86  cgaggctcccgaggaggccg 105
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>dbj|AK071333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091K09, full
           insert sequence
          Length = 1518

 Score =  258 bits (130), Expect = 1e-65
 Identities = 187/206 (90%)
 Strand = Plus / Plus

                                                                       
Query: 205 cgaccacatccccaagcagttccgcgaggagaacctcaaggatggcctgatggataatta 264
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 213 cgaccacatccccaagcagttccgcgaggagaacctcaaagatggcctgatggataatta 272

                                                                       
Query: 265 caagaatgttcctcagttcctttatggcttaagcccatctcagatggaaatgtttatgac 324
           ||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||| 
Sbjct: 273 caagaatgttcctcaattcctttatggcttaagccctgctcagatcgaaatgtttatgaa 332

                                                                       
Query: 325 cgacaacaacccttataatcggctgtcacagaaagttacagaggaaagcatttctgcttt 384
           |||  | || || ||| ||||||  ||||||| |||||||||||||||||||||||||| 
Sbjct: 333 cgatgataatccatatgatcggcaatcacagagagttacagaggaaagcatttctgcttc 392

                                     
Query: 385 gaggagttatgatgaatttggtatgt 410
            ||||| |||||||||||||| ||||
Sbjct: 393 taggagctatgatgaatttggcatgt 418



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                   
Query: 39 ccatggcgctcgcgctgcgctgccccgccgccgcctcgccg 79
          ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 50 ccatggcgctcgcgctgcgctgccccgccgctgcctcgccg 90



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 132 cgaggctcccgaggaggccg 151
           ||||||||||||||||||||
Sbjct: 137 cgaggctcccgaggaggccg 156
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score =  121 bits (61), Expect = 2e-24
 Identities = 103/117 (88%)
 Strand = Plus / Minus

                                                                         
Query: 252   tgatggataattacaagaatgttcctcagttcctttatggcttaagcccatctcagatgg 311
             |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||| |
Sbjct: 56760 tgatggataattacaagaatgttcctcaattcctttatggcttaagccctgctcagatcg 56701

                                                                      
Query: 312   aaatgtttatgaccgacaacaacccttataatcggctgtcacagaaagttacagagg 368
             |||||||||||| |||  | || || ||| ||||||  ||||||| |||||||||||
Sbjct: 56700 aaatgtttatgaacgatgataatccatatgatcggcaatcacagagagttacagagg 56644



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                            
Query: 205   cgaccacatccccaagcagttccgcgaggagaacctcaaggatggcc 251
             ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 57578 cgaccacatccccaagcagttccgcgaggagaacctcaaagatggcc 57532



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                      
Query: 39    ccatggcgctcgcgctgcgctgccccgccgccgcctcgccg 79
             ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 57741 ccatggcgctcgcgctgcgctgccccgccgctgcctcgccg 57701



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 366   aggaaagcatttctgctttgaggagttatgatgaatttggtatgt 410
             ||||||||||||||||||  ||||| |||||||||||||| ||||
Sbjct: 56546 aggaaagcatttctgcttctaggagctatgatgaatttggcatgt 56502



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   cgaggctcccgaggaggccg 151
             ||||||||||||||||||||
Sbjct: 57654 cgaggctcccgaggaggccg 57635
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  121 bits (61), Expect = 2e-24
 Identities = 103/117 (88%)
 Strand = Plus / Minus

                                                                            
Query: 252      tgatggataattacaagaatgttcctcagttcctttatggcttaagcccatctcagatgg 311
                |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||| |
Sbjct: 29278103 tgatggataattacaagaatgttcctcaattcctttatggcttaagccctgctcagatcg 29278044

                                                                         
Query: 312      aaatgtttatgaccgacaacaacccttataatcggctgtcacagaaagttacagagg 368
                |||||||||||| |||  | || || ||| ||||||  ||||||| |||||||||||
Sbjct: 29278043 aaatgtttatgaacgatgataatccatatgatcggcaatcacagagagttacagagg 29277987



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                               
Query: 205      cgaccacatccccaagcagttccgcgaggagaacctcaaggatggcc 251
                ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 29278921 cgaccacatccccaagcagttccgcgaggagaacctcaaagatggcc 29278875



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                         
Query: 39       ccatggcgctcgcgctgcgctgccccgccgccgcctcgccg 79
                ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 29279084 ccatggcgctcgcgctgcgctgccccgccgctgcctcgccg 29279044



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 252      tgatggataattacaagaatgttcctcagttcctttatggcttaagcccatctcagatgg 311
                |||||||||||||||| ||| ||||||| ||| ||||| ||||||| ||  |||||||||
Sbjct: 11541161 tgatggataattacaaaaatattcctcaattcttttatagcttaagtcctgctcagatgg 11541102

                            
Query: 312      aaatgtttatga 323
                ||||||| ||||
Sbjct: 11541101 aaatgttcatga 11541090



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 366      aggaaagcatttctgctttgaggagttatgatgaatttggtatgt 410
                ||||||||||||||||||  ||||| |||||||||||||| ||||
Sbjct: 29277889 aggaaagcatttctgcttctaggagctatgatgaatttggcatgt 29277845



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 132      cgaggctcccgaggaggccg 151
                ||||||||||||||||||||
Sbjct: 29278997 cgaggctcccgaggaggccg 29278978
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>gb|AC136229.3| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0690B12,
              complete sequence
          Length = 135323

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                          
Query: 252    tgatggataattacaagaatgttcctcagttcctttatggcttaagcccatctcagatgg 311
              |||||||||||||||| ||| ||||||| ||| ||||| ||||||| ||  |||||||||
Sbjct: 110655 tgatggataattacaaaaatattcctcaattcttttatagcttaagtcctgctcagatgg 110596

                          
Query: 312    aaatgtttatga 323
              ||||||| ||||
Sbjct: 110595 aaatgttcatga 110584
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>dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47L09, TM0218,
             complete sequence
          Length = 113213

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 204   tcgaccacatccccaagcagttccgcgaggagaacctcaaggatgg 249
             |||||||||||||||||||||||||  |||| || ||||| |||||
Sbjct: 87873 tcgaccacatccccaagcagttccggcaggaaaatctcaaagatgg 87828
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>gb|AF305070.2|AF305070 Chlamydomonas reinhardtii DEAH-box RNA helicase (Mut6) mRNA, complete
            cds
          Length = 4299

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 51   cgctgcgctgccccgccgccgcct 74
            ||||||||||||||||||||||||
Sbjct: 3169 cgctgcgctgccccgccgccgcct 3146
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>gb|AC002040.1|HUAC002040 Homo sapiens Chromosome 16 BAC clone CIT987-SK142A6  complete genomic
             sequence, complete sequence
          Length = 128765

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 20    gaacctccctccccatcagcca 41
             ||||||||||||||||||||||
Sbjct: 93745 gaacctccctccccatcagcca 93766
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>emb|AL513327.34| Human DNA sequence from clone RP11-415J8 on chromosome 1 Contains the
              gene for a novel protein (FLJ35476), the gene for a novel
              protein similar to ABO family protein, two novel genes, the
              PHC2 gene for polyhomeotic-like 2 (Drosophila) and two CpG
              islands, complete sequence
          Length = 188665

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 102    cctcctcccactaccaccccca 123
              ||||||||||||||||||||||
Sbjct: 177317 cctcctcccactaccaccccca 177338
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>gb|AC127459.3| Homo sapiens chromosome 16 clone RP11-20G6, complete sequence
          Length = 172331

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 20    gaacctccctccccatcagcca 41
             ||||||||||||||||||||||
Sbjct: 65654 gaacctccctccccatcagcca 65675
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 62      cccgccgccgcctcgccggcca 83
               ||||||||||||||||||||||
Sbjct: 5576371 cccgccgccgcctcgccggcca 5576350
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>dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, section 87/105
          Length = 219256

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 86     gcccccttccccaactcctcct 107
              ||||||||||||||||||||||
Sbjct: 183096 gcccccttccccaactcctcct 183075
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>dbj|AP001616.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1334E11, MX1-D21S171
            region, complete sequence
          Length = 16636

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 86   gcccccttccccaactcctcct 107
            ||||||||||||||||||||||
Sbjct: 3166 gcccccttccccaactcctcct 3145
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>dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:KB657H6, MX1-D21S171
              region, complete sequence
          Length = 124516

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 86     gcccccttccccaactcctcct 107
              ||||||||||||||||||||||
Sbjct: 123168 gcccccttccccaactcctcct 123147
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>ref|XM_463965.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2278

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 44  gcgctcgcgctgcgctgccccgccgccgc 72
           ||||||||||  |||||||||||||||||
Sbjct: 215 gcgctcgcgcaccgctgccccgccgccgc 243
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>emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005F21 on chromosome 20 Contains the
             PSMA7 gene for proteasome (prosome, macropain) subunit
             alpha type 7, the HRH3 gene for histamine receptor H3, the
             SS18L1 gene for synovial sarcoma translocation gene on
             chromosome 18-like 1, the GTPBP5 gene for GTP binding
             protein 5 (putative), the 3' end of the C20orf40 gene for
             a novel protein similar to Pleurodeles waltlii RAP55
             protein and seven CpG islands, complete sequence
          Length = 100976

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 63    ccgccgccgcctcgccggccagggccccc 91
             |||||||||||||||| ||||| ||||||
Sbjct: 15772 ccgccgccgcctcgcccgccagcgccccc 15744
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    cccgccgccgcctcgccggcc 82
             |||||||||||||||||||||
Sbjct: 89716 cccgccgccgcctcgccggcc 89696
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 67      cgccgcctcgccggccagggc 87
               |||||||||||||||||||||
Sbjct: 3898905 cgccgcctcgccggccagggc 3898885
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>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete
             sequence
          Length = 212960

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    ccgccgccgcctcgccggcca 83
             |||||||||||||||||||||
Sbjct: 54935 ccgccgccgcctcgccggcca 54915
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>gb|BC096840.1| Homo sapiens histamine receptor H3, mRNA (cDNA clone MGC:111749
          IMAGE:6971899), complete cds
          Length = 1356

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 63 ccgccgccgcctcgccggccagggccccc 91
          |||||||||||||||| ||||| ||||||
Sbjct: 83 ccgccgccgcctcgcccgccagcgccccc 55
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 61      ccccgccgccgcctcgccggc 81
               |||||||||||||||||||||
Sbjct: 6430762 ccccgccgccgcctcgccggc 6430742



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 60      gccccgccgccgcctcgccg 79
               ||||||||||||||||||||
Sbjct: 3047654 gccccgccgccgcctcgccg 3047635
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 63      ccgccgccgcctcgccggcca 83
               |||||||||||||||||||||
Sbjct: 7585285 ccgccgccgcctcgccggcca 7585265



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 44      gcgctcgcgctgcgctgccccgccgccgc 72
               ||||||||||  |||||||||||||||||
Sbjct: 1395078 gcgctcgcgcaccgctgccccgccgccgc 1395106
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>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0482F12
          Length = 147735

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 44    gcgctcgcgctgcgctgccccgccgccgc 72
             ||||||||||  |||||||||||||||||
Sbjct: 76350 gcgctcgcgcaccgctgccccgccgccgc 76378
to top
>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0638H11
          Length = 162746

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    ccccgccgccgcctcgccggc 81
             |||||||||||||||||||||
Sbjct: 97706 ccccgccgccgcctcgccggc 97686
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>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1705_E12
          Length = 191416

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     ccgccgccgcctcgccggcca 83
              |||||||||||||||||||||
Sbjct: 178991 ccgccgccgcctcgccggcca 178971
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>dbj|AP004030.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1145_E05
          Length = 101333

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 63   ccgccgccgcctcgccggcca 83
            |||||||||||||||||||||
Sbjct: 2045 ccgccgccgcctcgccggcca 2025
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>dbj|AK103476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130D21, full
           insert sequence
          Length = 2278

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 44  gcgctcgcgctgcgctgccccgccgccgc 72
           ||||||||||  |||||||||||||||||
Sbjct: 215 gcgctcgcgcaccgctgccccgccgccgc 243
to top
>emb|AJ278250.1|HSA278250 Homo sapiens HRH3 gene for histamine H3 receptor, exons 1-3
          Length = 3993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 63 ccgccgccgcctcgccggccagggccccc 91
          |||||||||||||||| ||||| ||||||
Sbjct: 81 ccgccgccgcctcgcccgccagcgccccc 53
to top
>emb|AJ296652.1|HSA296652 Homo sapiens HRH3 gene for histamine h3 receptor, exons 1-3
          Length = 3993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 63 ccgccgccgcctcgccggccagggccccc 91
          |||||||||||||||| ||||| ||||||
Sbjct: 81 ccgccgccgcctcgcccgccagcgccccc 53
to top
>gb|AY104298.1| Zea mays PCO095355 mRNA sequence
          Length = 950

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 56  cgctgccccgccgccgcctcg 76
           |||||||||||||||||||||
Sbjct: 92  cgctgccccgccgccgcctcg 112
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 64      cgccgccgcctcgccggccagggcc 88
               |||||||||||||| ||||||||||
Sbjct: 1087593 cgccgccgcctcgcaggccagggcc 1087569
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>dbj|AB045369.1| Homo sapiens mRNA for histamine H3 receptor HH3R, complete cds
          Length = 2050

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 63  ccgccgccgcctcgccggccagggccccc 91
           |||||||||||||||| ||||| ||||||
Sbjct: 337 ccgccgccgcctcgcccgccagcgccccc 309
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>dbj|AB019000.1| Homo sapiens mRNA for G-protein coupled receptor, complete cds
          Length = 1362

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 63 ccgccgccgcctcgccggccagggccccc 91
          |||||||||||||||| ||||| ||||||
Sbjct: 67 ccgccgccgcctcgcccgccagcgccccc 39
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>ref|NM_103884.2| Arabidopsis thaliana CLPR1; endopeptidase Clp AT1G49970 (CLPR1)
           mRNA, complete cds
          Length = 1714

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 aaagttacagaggaaagcat 375
           ||||||||||||||||||||
Sbjct: 487 aaagttacagaggaaagcat 506
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>ref|NM_188626.1| Oryza sativa (japonica cultivar-group), Ozsa8229 predicted mRNA
          Length = 756

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  ccgccgccgcctcgccggcc 82
           ||||||||||||||||||||
Sbjct: 163 ccgccgccgcctcgccggcc 144
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>ref|NM_185610.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 849

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  gccccgccgccgcctcgccg 79
           ||||||||||||||||||||
Sbjct: 741 gccccgccgccgcctcgccg 760
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>ref|NM_192094.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 65  gccgccgcctcgccggccagggcc 88
           ||||||||||||||||| ||||||
Sbjct: 89  gccgccgcctcgccggcaagggcc 112
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>ref|XM_526292.1| PREDICTED: Pan troglodytes similar to beta-1,4-mannosyltransferase;
           beta-1,4 mannosyltransferase (LOC470909), mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 accacggcgacggcccgcca 196
           ||||||||||||||||||||
Sbjct: 362 accacggcgacggcccgcca 343
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>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete
            sequence
          Length = 194427

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  ctcctcctcccactaccacc 119
            ||||||||||||||||||||
Sbjct: 7271 ctcctcctcccactaccacc 7290
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 41      atggcgctcgcgctgcgctg 60
               ||||||||||||||||||||
Sbjct: 1453391 atggcgctcgcgctgcgctg 1453372
to top
>gb|AY659218.1| Synthetic construct Peudomonas aeruginosa clone FLH051144.01F
          PA2060 gene, partial cds
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 56 cgctgccccgccgccgcctcgccg 79
          |||||| |||||||||||||||||
Sbjct: 20 cgctgcaccgccgccgcctcgccg 43
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>gb|AC183103.2| Pan troglodytes BAC clone CH251-712L4 from chromosome 3, complete
             sequence
          Length = 191366

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   accacggcgacggcccgcca 196
             ||||||||||||||||||||
Sbjct: 79057 accacggcgacggcccgcca 79076
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>gb|AC005164.2| Homo sapiens BAC clone CTB-135C18 from 7, complete sequence
          Length = 123331

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    gtcacagaaagttacagagg 368
              ||||||||||||||||||||
Sbjct: 117868 gtcacagaaagttacagagg 117849
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>ref|XM_533061.2| PREDICTED: Canis familiaris similar to Calgizzarin (S100
           calcium-binding protein A11) (S100C protein) (MLN 70)
           (LOC475852), mRNA
          Length = 756

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 50  gcgctgcgctgccccgccgccgcc 73
           |||||||||| |||||||||||||
Sbjct: 115 gcgctgcgctcccccgccgccgcc 138
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>emb|X14855.1|TTV1TP Thermoproteus tenax virus 1 (TTV1) genome
          Length = 13669

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 94    ccccaactcctcctcccactaccacccc 121
             ||||||||||| |||||||| |||||||
Sbjct: 12136 ccccaactcctactcccactcccacccc 12163
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>emb|X14717.1|TTV1VP Thermoproteus tenax virus 1 viral protein TPX-VT3 exhibiting genomic
            variation
          Length = 4034

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 94   ccccaactcctcctcccactaccacccc 121
            ||||||||||| |||||||| |||||||
Sbjct: 2603 ccccaactcctactcccactcccacccc 2630



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 94   ccccaactcctcctcccactaccacccc 121
            ||||||||||| |||||||| |||||||
Sbjct: 1153 ccccaactcctactcccactcccacccc 1180
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>ref|XM_844459.1| PREDICTED: Canis familiaris similar to brain and acute leukemia,
           cytoplasmic isoform 1 (LOC612780), mRNA
          Length = 628

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 64  cgccgccgcctcgccggccagggc 87
           ||||||||||||||||||| ||||
Sbjct: 80  cgccgccgcctcgccggcctgggc 103
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>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold
          Length = 574594

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     ccccgccgccgcctcgccgg 80
              ||||||||||||||||||||
Sbjct: 548525 ccccgccgccgcctcgccgg 548544
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>emb|AL691464.4| Human DNA sequence from clone RP4-644F6 on chromosome 1 Contains a
             novel gene (DKFZp686G0786), a calpain, small subunit 1
             (CAPNS1) pseudogene and a guanylate binding protein
             pseudogene, complete sequence
          Length = 83709

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   tcctcagttcctttatggct 293
             ||||||||||||||||||||
Sbjct: 81162 tcctcagttcctttatggct 81143
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>ref|NM_007939.1| Mus musculus Eph receptor A8 (Epha8), mRNA
          Length = 4737

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  tgggaggctgcaggtgccag 172
            ||||||||||||||||||||
Sbjct: 2028 tgggaggctgcaggtgccag 2047
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>emb|AL139130.28| Human DNA sequence from clone RP11-139I14 on chromosome 1 Contains the
             3' end of the RHBG gene for Rhesus blood group B
             glycoprotein, a novel gene, the gene for transcriptional
             activator of the c-fos promoter (CROC4) and two CpG
             islands, complete sequence
          Length = 61145

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 89    cccttccccaactcctcctcccactacc 116
             |||||||||| ||||||||||| |||||
Sbjct: 25676 cccttccccagctcctcctccccctacc 25703
to top
>gb|BT000572.1| Arabidopsis thaliana nClpP5, putative  (At1g49970/F2J10_5) mRNA,
           complete cds
          Length = 1164

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 aaagttacagaggaaagcat 375
           ||||||||||||||||||||
Sbjct: 340 aaagttacagaggaaagcat 359
to top
>gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome
          Length = 221454

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cgaggctcccgaggaggccg 151
              ||||||||||||||||||||
Sbjct: 105863 cgaggctcccgaggaggccg 105882
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>emb|X59290.1|RNEEKR Rat eek mRNA for eph and elk-related kinase
          Length = 1119

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 tgggaggctgcaggtgccag 172
           ||||||||||||||||||||
Sbjct: 54  tgggaggctgcaggtgccag 73
to top
>gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, complete genome
          Length = 215678

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cgaggctcccgaggaggccg 151
              ||||||||||||||||||||
Sbjct: 105871 cgaggctcccgaggaggccg 105890
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>dbj|AK220393.1| Mus musculus mRNA for mKIAA1459 protein
          Length = 4199

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  tgggaggctgcaggtgccag 172
            ||||||||||||||||||||
Sbjct: 1503 tgggaggctgcaggtgccag 1522
to top
>gb|AC087481.9| Homo sapiens chromosome 15, clone RP11-540B6, complete sequence
          Length = 179400

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    ccactaccacccccagtcgg 128
              ||||||||||||||||||||
Sbjct: 156497 ccactaccacccccagtcgg 156516
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>gb|AC003684.1| Homo sapiens X BAC GS1-519E5 (Genome Systems Human BAC library) complete
              sequence
          Length = 210954

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     cccttccccaactcctcctc 108
              ||||||||||||||||||||
Sbjct: 150282 cccttccccaactcctcctc 150263
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     cggccagggcccccttccccaact 101
              ||||||||||||||| ||||||||
Sbjct: 581969 cggccagggccccctcccccaact 581946
to top
>dbj|AK124870.1| Homo sapiens cDNA FLJ42880 fis, clone BRHIP3003916
          Length = 3597

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 89   cccttccccaactcctcctcccactacc 116
            |||||||||| ||||||||||| |||||
Sbjct: 1880 cccttccccagctcctcctccccctacc 1853
to top
>dbj|AK124566.1| Homo sapiens cDNA FLJ42575 fis, clone BRACE3008237
          Length = 4773

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 89   cccttccccaactcctcctcccactacc 116
            |||||||||| ||||||||||| |||||
Sbjct: 3057 cccttccccagctcctcctccccctacc 3030
to top
>dbj|AK094493.1| Homo sapiens cDNA FLJ37174 fis, clone BRACE2028406
          Length = 2041

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 89  cccttccccaactcctcctcccactacc 116
           |||||||||| ||||||||||| |||||
Sbjct: 324 cccttccccagctcctcctccccctacc 297
to top
>gb|AC023494.31| Homo sapiens 3 BAC RP11-59M4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 57963

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 87    cccccttccccaactcctcctccc 110
             ||||||||||| ||||||||||||
Sbjct: 21452 cccccttcccccactcctcctccc 21475
to top
>dbj|AK091014.1| Homo sapiens cDNA FLJ33695 fis, clone BRAWH2003662
          Length = 2576

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 89  cccttccccaactcctcctcccactacc 116
           |||||||||| ||||||||||| |||||
Sbjct: 859 cccttccccagctcctcctccccctacc 832
to top
>gb|AC024947.5| Homo sapiens chromosome 01 clone RP11-200I10, complete sequence
          Length = 163033

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    gtcacagaaagttacagagg 368
              ||||||||||||||||||||
Sbjct: 124239 gtcacagaaagttacagagg 124220
to top
>ref|XM_944081.1| PREDICTED: Homo sapiens hypothetical protein LOC650195 (LOC650195),
           mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 accacggcgacggcccgcca 196
           ||||||||||||||||||||
Sbjct: 362 accacggcgacggcccgcca 343
to top
>gb|AF426435.1|AF426435 Sus scrofa double-sex and mab-related transcription factor 1 (DMRT1)
            gene, promoter region
          Length = 2627

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 120  cccagtcggcggcgaggctcccgaggag 147
            ||||| || |||||||||||||||||||
Sbjct: 2574 cccagccgacggcgaggctcccgaggag 2547
to top
>gb|AC008774.7| Homo sapiens chromosome 5 clone CTD-2018M7, complete sequence
          Length = 128781

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   aggagaacctcaaggatggc 250
             ||||||||||||||||||||
Sbjct: 52213 aggagaacctcaaggatggc 52194
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 62      cccgccgccgcctcgccggccagggccc 89
               ||||||||| |||||| |||||||||||
Sbjct: 1874300 cccgccgccacctcgcgggccagggccc 1874273
to top
>gb|AC034245.5| Homo sapiens chromosome 5 clone RP11-155L15, complete sequence
          Length = 158094

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    aggagaacctcaaggatggc 250
              ||||||||||||||||||||
Sbjct: 149678 aggagaacctcaaggatggc 149697
to top
>gb|AY045677.1| Arabidopsis thaliana At1g49970/F2J10_5 mRNA, complete cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 aaagttacagaggaaagcat 375
           ||||||||||||||||||||
Sbjct: 444 aaagttacagaggaaagcat 463
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>gb|AC016638.9| Homo sapiens chromosome 5 clone RP11-365H8, complete sequence
          Length = 182823

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   aggagaacctcaaggatggc 250
             ||||||||||||||||||||
Sbjct: 29398 aggagaacctcaaggatggc 29417
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 65       gccgccgcctcgccggccagggcc 88
                ||||||||||||||||| ||||||
Sbjct: 28301120 gccgccgcctcgccggcaagggcc 28301143



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 63      ccgccgccgcctcgccggcc 82
               ||||||||||||||||||||
Sbjct: 7301925 ccgccgccgcctcgccggcc 7301906
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>gb|AC092903.11| Homo sapiens 3 BAC RP11-666A20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161141

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   accacggcgacggcccgcca 196
             ||||||||||||||||||||
Sbjct: 83513 accacggcgacggcccgcca 83494
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>gb|AC091043.12| Homo sapiens chromosome 18, clone RP11-595B24, complete sequence
          Length = 208310

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 9      tccagttatccgaacctccctccccatc 36
              ||||||| ||| ||||||||||||||||
Sbjct: 101389 tccagttttcctaacctccctccccatc 101362
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>gb|AC108733.4| Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 171184

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 354    agaaagttacagaggaaagcattt 377
              ||||||||| ||||||||||||||
Sbjct: 110614 agaaagttagagaggaaagcattt 110591
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>ref|NM_214111.1| Sus scrofa doublesex and mab-3 related transcription factor 1
           (DMRT-1), mRNA
          Length = 2199

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 120 cccagtcggcggcgaggctcccgaggag 147
           ||||| || |||||||||||||||||||
Sbjct: 57  cccagccgacggcgaggctcccgaggag 30
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>gb|AE004632.1| Pseudomonas aeruginosa PAO1, section 193 of 529 of the complete
            genome
          Length = 12249

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 56   cgctgccccgccgccgcctcgccg 79
            |||||| |||||||||||||||||
Sbjct: 9538 cgctgcaccgccgccgcctcgccg 9561
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>gb|AY086911.1| Arabidopsis thaliana clone 29389 mRNA, complete sequence
          Length = 1376

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 aaagttacagaggaaagcat 375
           ||||||||||||||||||||
Sbjct: 385 aaagttacagaggaaagcat 404
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>ref|XM_342952.2| PREDICTED: Rattus norvegicus eph and elk-related kinase (LOC60589),
            mRNA
          Length = 3153

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  tgggaggctgcaggtgccag 172
            ||||||||||||||||||||
Sbjct: 2088 tgggaggctgcaggtgccag 2107
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>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0478H03
          Length = 167560

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     gccgccgcctcgccggccagggcc 88
              ||||||||||||||||| ||||||
Sbjct: 135627 gccgccgcctcgccggcaagggcc 135650
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>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0519D04
          Length = 193068

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    gccgccgcctcgccggccagggcc 88
             ||||||||||||||||| ||||||
Sbjct: 16220 gccgccgcctcgccggcaagggcc 16243
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>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431F01
          Length = 143209

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     ccgccgccgcctcgccggcc 82
              ||||||||||||||||||||
Sbjct: 103355 ccgccgccgcctcgccggcc 103336
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>gb|AF216651.1| Sus scrofa doublesex and mab-3 related transcription factor 1
           (DMRT-1) mRNA, complete cds
          Length = 2199

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 120 cccagtcggcggcgaggctcccgaggag 147
           ||||| || |||||||||||||||||||
Sbjct: 57  cccagccgacggcgaggctcccgaggag 30
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>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0702F05
          Length = 145018

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     gccccgccgccgcctcgccg 79
              ||||||||||||||||||||
Sbjct: 135603 gccccgccgccgcctcgccg 135584
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>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
            clone:P0681F10
          Length = 170371

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   gccccgccgccgcctcgccg 79
            ||||||||||||||||||||
Sbjct: 1839 gccccgccgccgcctcgccg 1820
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>dbj|AB022330.1| Arabidopsis thaliana mRNA for nClpP5 (nuclear encoded ClpP5),
           complete cds
          Length = 1463

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 aaagttacagaggaaagcat 375
           ||||||||||||||||||||
Sbjct: 487 aaagttacagaggaaagcat 506
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>gb|AC004460.1|AC004460 Homo sapiens PAC clone RP5-1086D14, complete sequence
          Length = 113803

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ccactaccacccccagtcgg 128
             ||||||||||||||||||||
Sbjct: 88688 ccactaccacccccagtcgg 88669
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>dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C10, full
           insert sequence
          Length = 1849

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 65  gccgccgcctcgccggccagggcc 88
           ||||||||||||||||| ||||||
Sbjct: 211 gccgccgcctcgccggcaagggcc 234
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>dbj|AK099190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H12, full
           insert sequence
          Length = 1055

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  ccgccgccgcctcgccggcc 82
           ||||||||||||||||||||
Sbjct: 209 ccgccgccgcctcgccggcc 190
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>emb|Z64519.1|HS133A9F H.sapiens CpG island DNA genomic Mse1 fragment, clone 133a9,
           forward read cpg133a9.ft1a
          Length = 253

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cccttccccaactcctcctc 108
           ||||||||||||||||||||
Sbjct: 104 cccttccccaactcctcctc 123
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>dbj|AK069592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019I12, full
           insert sequence
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  ccgccgccgcctcgccggcc 82
           ||||||||||||||||||||
Sbjct: 212 ccgccgccgcctcgccggcc 193
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>emb|AJ965540.1| Alternanthera yellow vein virus, complete genome, isolate G38
          Length = 2745

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 95   cccaactcctcctcccactaccac 118
            ||||||||||||||||| ||||||
Sbjct: 2378 cccaactcctcctcccaataccac 2355
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>gb|AY104631.1| Zea mays PCO147208 mRNA sequence
          Length = 777

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 87  cccccttccccaactcctcctccc 110
           ||||||||||||| ||||||||||
Sbjct: 129 cccccttccccaaatcctcctccc 152
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 51      cgctgcgctgccccgccgcc 70
               ||||||||||||||||||||
Sbjct: 2367162 cgctgcgctgccccgccgcc 2367143
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>emb|AM050736.1| Alternanthera yellow vein virus complete genome, isolate Hn51
          Length = 2745

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 95   cccaactcctcctcccactaccac 118
            ||||||||||||||||| ||||||
Sbjct: 2378 cccaactcctcctcccaataccac 2355
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>gb|AC133097.3| Mus musculus BAC clone RP23-287O2 from 1, complete sequence
          Length = 199276

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   ctcctcctcccactaccaccccca 123
             |||||||||||||| |||||||||
Sbjct: 96869 ctcctcctcccactcccaccccca 96892
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>gb|U72207.1|MMU72207 Mus musculus Eph-and Elk-related kinase (eek) mRNA, complete cds
          Length = 4737

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  tgggaggctgcaggtgccag 172
            ||||||||||||||||||||
Sbjct: 2028 tgggaggctgcaggtgccag 2047
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>gb|AC164092.3| Mus musculus BAC clone RP23-366E4 from chromosome 9, complete sequence
          Length = 203636

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    ctcctcctcccactaccacc 119
              ||||||||||||||||||||
Sbjct: 136097 ctcctcctcccactaccacc 136116
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>emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on chromosome 4, complete
              sequence
          Length = 182829

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    tgggaggctgcaggtgccag 172
              ||||||||||||||||||||
Sbjct: 124899 tgggaggctgcaggtgccag 124880
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>emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on chromosome X, complete
              sequence
          Length = 196568

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     ccccttccccaactcctcct 107
              ||||||||||||||||||||
Sbjct: 156250 ccccttccccaactcctcct 156269


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,405,037
Number of Sequences: 3902068
Number of extensions: 4405037
Number of successful extensions: 116949
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115405
Number of HSP's gapped (non-prelim): 1544
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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