ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet50e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329224 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 329165 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329164 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 329105 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 329104 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 329045 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329044 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 328985 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 328984 cttttcaagtcc 328973 Score = 65.9 bits (33), Expect = 6e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||| |||||| ||||| |||||||||||||||| || |||||||||||||| Sbjct: 421201 gacacggcccggactcccacggggggcagcagtggggaatcttggacaatgggcgaaagc 421142 Query: 61 c 61 | Sbjct: 421141 c 421141 Score = 65.9 bits (33), Expect = 6e-08 Identities = 72/85 (84%) Strand = Plus / Minus Query: 143 gaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgcaagcg 202 |||||| |||| |||||||||| ||||| |||||||||||||||| | || ||||| | Sbjct: 421057 gaggaagaagccccggctaactccgtgccagcagccgcggtaagacggggggggcaagtg 420998 Query: 203 ttatccggaatgattgggcgtaaag 227 || | |||||||| ||||||||||| Sbjct: 420997 ttcttcggaatgactgggcgtaaag 420973
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127280 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 127221 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127220 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 127161 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127160 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 127101 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127100 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 127041 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 127040 cttttcaagtcc 127029 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95457 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 95516 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95517 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 95576 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95577 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 95636 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95637 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 95696 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 95697 cttttcaagtcc 95708
>gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal RNA gene, partial sequence Length = 1444 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 344 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 404 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 405 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 464 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 524 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 525 cttttcaagtcc 536
>gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, partial sequence; plastid Length = 1406 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 320 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 380 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 381 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 440 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 500 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 501 cttttcaagtcc 512
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48510 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 48451 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48450 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 48391 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 48390 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 48331 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48330 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 48271 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 48270 cttttcaagtcc 48259 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16608 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 16667 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16668 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 16727 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 16728 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 16787 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16788 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 16847 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 16848 cttttcaagtcc 16859
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127349 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 127290 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127289 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 127230 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127229 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 127170 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127169 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 127110 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 127109 cttttcaagtcc 127098 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95488 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 95547 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95548 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 95607 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95608 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 95667 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95668 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 95727 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 95728 cttttcaagtcc 95739
>gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E (VATE) mRNA, complete cds Length = 1970 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1243 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 1302 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1303 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 1362 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1363 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 1422 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1423 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 1482 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 1483 cttttcaagtcc 1494
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1810 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 1869 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1870 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 1929 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1930 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 1989 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1990 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 2049 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 2050 cttttcaagtcc 2061
>emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloroplast 16S rRNA gene Length = 1482 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 347 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 407 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 408 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 467 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 527 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 528 cttttcaagtcc 539
>emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum partial chloroplast 16S rRNA gene Length = 1483 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 348 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 408 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 409 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 468 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 528 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 529 cttttcaagtcc 540
>emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 16S rRNA gene Length = 1483 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 348 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 408 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 409 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 468 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 528 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 529 cttttcaagtcc 540
>emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast 16S rRNA gene Length = 1483 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 348 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 408 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 409 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 468 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 528 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 529 cttttcaagtcc 540
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128066 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 128007 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128006 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 127947 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127946 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 127887 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127886 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 127827 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 127826 cttttcaagtcc 127815 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96165 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 96224 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96225 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 96284 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 96285 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 96344 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96345 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 96404 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 96405 cttttcaagtcc 96416
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123546 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 123487 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123486 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 123427 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123426 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 123367 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123366 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 123307 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 123306 cttttcaagtcc 123295 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91348 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 91407 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91408 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 91467 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 91468 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 91527 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91528 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 91587 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 91588 cttttcaagtcc 91599
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89267 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 89208 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 89207 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 89148 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89147 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 89088 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89087 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 89028 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 89027 cttttcaagtcc 89016
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123553 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 123494 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123493 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 123434 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123433 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 123374 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123373 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 123314 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 123313 cttttcaagtcc 123302 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91603 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 91662 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 91663 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 91722 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 91723 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 91782 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91783 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 91842 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 91843 cttttcaagtcc 91854
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123553 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 123494 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123493 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 123434 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123433 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 123374 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123373 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 123314 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 123313 cttttcaagtcc 123302 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91603 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 91662 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 91663 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 91722 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 91723 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 91782 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91783 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 91842 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 91843 cttttcaagtcc 91854
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123502 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 123443 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123442 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 123383 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123382 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 123323 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123322 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 123263 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 123262 cttttcaagtcc 123251 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91548 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 91607 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 91608 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 91667 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 91668 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 91727 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91728 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 91787 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 91788 cttttcaagtcc 91799
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123523 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 123464 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123463 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 123404 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123403 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 123344 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123343 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 123284 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 123283 cttttcaagtcc 123272 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91595 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 91654 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 91655 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 91714 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 91715 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 91774 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91775 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 91834 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 91835 cttttcaagtcc 91846
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118648 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 118707 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118708 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 118767 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118768 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 118827 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118828 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 118887 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 118888 cttttcaagtcc 118899 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86773 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 86832 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 86833 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 86892 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86893 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 86952 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86953 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 87012 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 87013 cttttcaagtcc 87024 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59150 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 59091 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 59090 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 59031 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 59030 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 58971 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 58970 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcatctgtaggtgg 58911 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 58910 cttttcaagtcc 58899 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10370 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 10429 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10430 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 10489 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10490 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 10549 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10550 ggtaagacagaggatgcaagcgttatccggaatgattgggcataaagcgtctgtaggtgg 10609 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 10610 cttttcaagtcc 10621
>dbj|AB254251.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone: 3m Length = 617 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 245 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 246 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 305 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 306 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 365 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 425 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 426 cttttcaagtcc 437
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9264528 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 9264587 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9264588 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 9264647 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9264648 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 9264707 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9264708 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 9264767 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 9264768 cttttcaagtcc 9264779 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224028 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 9224087 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9224088 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 9224147 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9224148 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 9224207 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224208 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 9224267 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 9224268 cttttcaagtcc 9224279 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9205700 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 9205759 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9205760 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 9205819 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9205820 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 9205879 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9205880 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 9205939 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 9205940 cttttcaagtcc 9205951 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9160622 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 9160681 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9160682 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 9160741 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9160742 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 9160801 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9160802 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 9160861 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 9160862 cttttcaagtcc 9160873 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9128747 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 9128806 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9128807 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 9128866 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9128867 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 9128926 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9128927 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 9128986 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 9128987 cttttcaagtcc 9128998 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9101124 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 9101065 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9101064 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 9101005 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9101004 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 9100945 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9100944 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcatctgtaggtgg 9100885 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 9100884 cttttcaagtcc 9100873 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9052444 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 9052503 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9052504 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 9052563 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9052564 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 9052623 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 9052624 ggtaagacagaggatgcaagcgttatccggaatgattgggcataaagcgtctgtaggtgg 9052683 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 9052684 cttttcaagtcc 9052695 Score = 58.0 bits (29), Expect = 1e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||| |||||| ||||| || ||||||||||||| || |||||||||||||| Sbjct: 32961781 gacacggcccggactcccacggggggtagcagtggggaatcttggacaatgggcgaaagc 32961722 Query: 61 c 61 | Sbjct: 32961721 c 32961721 Score = 52.0 bits (26), Expect = 9e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 143 gaggaataagcatcggctaactctgtgccggcagccgcggtaagac 188 |||||| |||| |||||||||| ||||| |||||||||||||||| Sbjct: 32961637 gaggaagaagccccggctaactccgtgccagcagccgcggtaagac 32961592 Score = 52.0 bits (26), Expect = 9e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 227 gcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||| Sbjct: 23619734 gcgtctgtaggtggcttttcaagtcc 23619709 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 aagcatcggctaactctgtgcc 171 |||||||||||||||||||||| Sbjct: 18465935 aagcatcggctaactctgtgcc 18465956 Score = 42.1 bits (21), Expect = 0.82 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 tacgggaggcagcagtggggaattt 42 |||||| |||||||||||||||||| Sbjct: 15066850 tacgggtggcagcagtggggaattt 15066874 Score = 42.1 bits (21), Expect = 0.82 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 tacgggaggcagcagtggggaattt 42 |||||| |||||||||||||||||| Sbjct: 14320099 tacgggtggcagcagtggggaattt 14320075
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19934515 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 19934574 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 19934575 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 19934634 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19934635 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 19934694 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19934695 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 19934754 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 19934755 cttttcaagtcc 19934766 Score = 468 bits (236), Expect = e-129 Identities = 248/252 (98%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280908 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 10280849 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10280848 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 10280789 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 10280788 agaagaaacaatgatggtatctgatgaataagcatcggctaactctgtgccagcagccgc 10280729 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280728 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 10280669 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 10280668 cttttcaagtcc 10280657 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10383394 gacacggcccagactcctacgggaggcagcagtggggaattttccacaatgggcgaaagc 10383453 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10383454 ctgacggagcaatgccacgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 10383513 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10383514 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgctagcagccgc 10383573 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10383574 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 10383633 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 10383634 cttttcaagtcc 10383645 Score = 42.1 bits (21), Expect = 0.82 Identities = 27/29 (93%) Strand = Plus / Minus Query: 160 taactctgtgccggcagccgcggtaagac 188 |||||| ||||| |||||||||||||||| Sbjct: 4266731 taactccgtgccagcagccgcggtaagac 4266703
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14180169 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 14180110 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14180109 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 14180050 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14180049 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 14179990 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179989 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 14179930 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 14179929 cttttcaagtcc 14179918 Score = 165 bits (83), Expect = 8e-38 Identities = 89/91 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 21822866 gacacggcccagactcctacgggagacagcagtggggaattttccgcaatgggcgaaagc 21822925 Query: 61 ctgacggagcaatgccgcgtggaggtggaag 91 ||||| ||||||||||||||||||||||||| Sbjct: 21822926 ctgacagagcaatgccgcgtggaggtggaag 21822956 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Minus Query: 13 actcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcc 61 ||||| ||||| |||||||||||||||| || ||||||||||||||| Sbjct: 13449257 actcccacggggggcagcagtggggaatcttggacaatgggcgaaagcc 13449209
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884843 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 884784 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 884783 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 884724 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 884723 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 884664 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884663 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 884604 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 884603 cttttcaagtcc 884592 Score = 452 bits (228), Expect = e-124 Identities = 246/252 (97%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 12829630 gacacggcccagactcctacgggaggcagcagtggggaattttccacaatgggcgaaagc 12829571 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 12829570 ctgacggagcaatgttgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 12829511 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12829510 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 12829451 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12829450 ggtaagacagaggatgcaagcattatccggaatgattgggcgtaaagcgtctgtaggtgg 12829391 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 12829390 cttttcaagtcc 12829379 Score = 121 bits (61), Expect = 1e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 19262132 gacacggcccagactcctacgggaggcagcagtggagaattttccgcaatgggcgaaagc 19262191 Query: 61 ctgac 65 ||||| Sbjct: 19262192 ctgac 19262196 Score = 97.6 bits (49), Expect = 2e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 2 acacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcc 61 ||||| ||||||||||||||||| | ||||||||| |||||||||||||| | ||||||| Sbjct: 4749728 acacgacccagactcctacgggaagtagcagtgggaaattttccgcaatgagagaaagcc 4749787 Query: 62 tgacggagcaatgccgc 78 ||| ||||||||||||| Sbjct: 4749788 tgatggagcaatgccgc 4749804 Score = 42.1 bits (21), Expect = 0.82 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 taagacagaggatgcaagcgttatc 207 ||||||||||||||||| ||||||| Sbjct: 5176741 taagacagaggatgcaatcgttatc 5176765
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14345788 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 14345847 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14345848 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 14345907 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14345908 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 14345967 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14345968 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 14346027 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 14346028 cttttcaagtcc 14346039 Score = 434 bits (219), Expect = e-119 Identities = 225/227 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14357175 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 14357234 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14357235 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 14357294 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14357295 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 14357354 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaag 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14357355 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaag 14357401 Score = 414 bits (209), Expect = e-113 Identities = 239/249 (95%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||| Sbjct: 811931 gacatggcccagactcctacgggaggcagcaatgtggaattttccgcaatgggagaaagc 811872 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 811871 ctgacggagcaatgctgtgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 811812 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 811811 agaagaaacaatgacggtatctgaggaataagcatcggctaactctatgccagcagccgt 811752 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 811751 ggtaagacagaggatgcaagcgttatccggaatgattaggcgtaaagcgtctgtaggtgg 811692 Query: 241 cttttcaag 249 ||||||||| Sbjct: 811691 cttttcaag 811683 Score = 46.1 bits (23), Expect = 0.053 Identities = 32/35 (91%) Strand = Plus / Plus Query: 168 tgccggcagccgcggtaagacagaggatgcaagcg 202 |||| |||||| |||||| |||||||||||||||| Sbjct: 30831538 tgccagcagccacggtaaaacagaggatgcaagcg 30831572 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Minus Query: 138 tatctgaggaataagcatcggctaactctgtgcc 171 ||||||||||||||||||| ||||| | |||||| Sbjct: 10965725 tatctgaggaataagcatcagctaattttgtgcc 10965692
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51528 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 51469 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 51468 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 51409 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 51408 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 51349 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51348 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 51289 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 51288 cttttcaagtcc 51277
>gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plastid targeting region Length = 5270 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1036 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 977 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 976 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 917 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 916 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 857 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 797 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 796 cttttcaagtcc 785
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65050 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 64991 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 64990 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 64931 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 64930 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 64871 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64870 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 64811 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 64810 cttttcaagtcc 64799
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67710 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 67769 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 67770 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 67829 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 67830 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 67889 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67890 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 67949 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 67950 cttttcaagtcc 67961 Score = 434 bits (219), Expect = e-119 Identities = 225/227 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79097 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 79156 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 79157 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 79216 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79217 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 79276 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaag 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79277 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaag 79323
>dbj|AK059639.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B03, full insert sequence Length = 1569 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 301 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 302 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 361 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 362 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 421 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 481 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 482 cttttcaagtcc 493
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945791 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 19945850 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 19945851 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 19945910 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19945911 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 19945970 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945971 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 19946030 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 19946031 cttttcaagtcc 19946042 Score = 468 bits (236), Expect = e-129 Identities = 248/252 (98%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286947 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 10286888 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10286887 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 10286828 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 10286827 agaagaaacaatgatggtatctgatgaataagcatcggctaactctgtgccagcagccgc 10286768 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286767 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 10286708 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 10286707 cttttcaagtcc 10286696 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10389433 gacacggcccagactcctacgggaggcagcagtggggaattttccacaatgggcgaaagc 10389492 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10389493 ctgacggagcaatgccacgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 10389552 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10389553 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgctagcagccgc 10389612 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389613 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 10389672 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 10389673 cttttcaagtcc 10389684 Score = 42.1 bits (21), Expect = 0.82 Identities = 27/29 (93%) Strand = Plus / Minus Query: 160 taactctgtgccggcagccgcggtaagac 188 |||||| ||||| |||||||||||||||| Sbjct: 4267552 taactccgtgccagcagccgcggtaagac 4267524
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123496 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 123437 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123436 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 123377 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123376 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 123317 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123316 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 123257 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 123256 cttttcaagtcc 123245 Score = 484 bits (244), Expect = e-134 Identities = 250/252 (99%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91543 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 91602 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 91603 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 91662 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 91663 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 91722 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91723 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 91782 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 91783 cttttcaagtcc 91794
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137178 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 137237 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 137238 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 137297 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 137298 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 137357 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 137358 ggtaagacagaggatgcaagcgttatccggaatgattgggcataaagcgtctgtaggtgg 137417 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 137418 cttttcaagtcc 137429
>gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 261 gacacggcccagactcctacgggaggcagcagtgggaatttttccgcaatgggcgaaagc 320 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 380 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 381 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 440 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 500 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 501 cttttcaagtcc 512
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9245467 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 9245408 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9245407 ctgacggagcaatgccacgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 9245348 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9245347 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 9245288 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9245287 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 9245228 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 9245227 cttttcaagtcc 9245216 Score = 103 bits (52), Expect = 3e-19 Identities = 107/124 (86%), Gaps = 6/124 (4%) Strand = Plus / Minus Query: 46 gcaatgggcgaaagcctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtc 105 |||||||| |||||||||| ||||||||| | ||||||||| ||| || |||||||||| Sbjct: 16547510 gcaatgggtgaaagcctgatggagcaatgtcatgtggaggtgaaagccc-acgggtcgtc 16547452 Query: 106 aacttcttttctcggagaagaa-----acaatgacggtatctgaggaataagcatcggct 160 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||||||||| Sbjct: 16547451 aacttcttttctcagagaagaacaatgacaatgacagtatccgagaaataagcatcggct 16547392 Query: 161 aact 164 |||| Sbjct: 16547391 aact 16547388
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56680 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 56621 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 56620 ctgacggagcaatgccacgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 56561 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 56560 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 56501 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56500 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 56441 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 56440 cttttcaagtcc 56429
>emb|AM159495.1| Uncultured bacterium 16S rRNA gene, clone RB90b-49 Length = 1008 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 353 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 354 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 413 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 414 agaagaaacaatgacggtatctgaggaataagcatcggctaattctgtgccagcagccgc 473 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 533 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 534 cttttcaagtcc 545
>emb|AM159406.1| Uncultured bacterium 16S rRNA gene, clone RB45-47 Length = 972 Score = 476 bits (240), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 344 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 345 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 404 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 405 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 464 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 ggtaagacagaggatgcaggcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 524 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 525 cttttcaagtcc 536
>gb|DQ098847.1| Uncultured bacterium clone MLLC19 16S ribosomal RNA gene, partial sequence Length = 774 Score = 468 bits (236), Expect = e-129 Identities = 248/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 327 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 328 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcgg 387 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 388 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 447 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 507 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 508 cttttcaagtcc 519
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 468 bits (236), Expect = e-129 Identities = 248/252 (98%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62233 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 62174 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 62173 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 62114 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 62113 agaagaaacaatgatggtatctgatgaataagcatcggctaactctgtgccagcagccgc 62054 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62053 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 61994 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 61993 cttttcaagtcc 61982
>emb|AM159498.1| Uncultured bacterium 16S rRNA gene, clone RB90b-72 Length = 997 Score = 468 bits (236), Expect = e-129 Identities = 248/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 342 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 343 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacctcttttctcgg 402 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 403 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagtagccgc 462 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 522 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 523 cttttcaagtcc 534
>emb|AM159431.1| Uncultured bacterium 16S rRNA gene, clone RB45-25e Length = 984 Score = 462 bits (233), Expect = e-127 Identities = 249/253 (98%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 344 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttc-tcg 119 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 345 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttcctcg 404 Query: 120 gagaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 405 gagaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccg 464 Query: 180 cggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 cggtaagaccgaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 524 Query: 240 gcttttcaagtcc 252 ||||||||||||| Sbjct: 525 gcttttcaagtcc 537
>gb|DQ098848.1| Uncultured bacterium clone MLLC20 16S ribosomal RNA gene, partial sequence Length = 719 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 333 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 334 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcgg 393 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 394 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 453 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 513 Query: 241 cttttcaagtcc 252 | |||||||||| Sbjct: 514 cctttcaagtcc 525
>gb|DQ187922.1| Uncultured phototrophic eukaryote clone 90 16S ribosomal RNA gene, partial sequence Length = 927 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 136 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 137 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcgg 196 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 197 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 256 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 316 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 317 cttttcaagtcc 328
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138584 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 138525 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 138524 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcgg 138465 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138464 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 138405 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138404 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 138345 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 138344 cttttcaagtcc 138333 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101698 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 101757 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 101758 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcgg 101817 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 101818 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 101877 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101878 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 101937 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 101938 cttttcaagtcc 101949
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 89786 gacacggcccagactcctacgggaggcagcagtggggaattttccacaatgggcgaaagc 89845 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 89846 ctgacggagcaatgccacgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 89905 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89906 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgctagcagccgc 89965 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89966 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 90025 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 90026 cttttcaagtcc 90037
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 23850 gacacggcccagactcctacgggaggcagcagtggggaattttccacaatgggcgaaagc 23909 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 23910 ctgacggagcaatgccacgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 23969 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 23970 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgctagcagccgc 24029 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24030 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 24089 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 24090 cttttcaagtcc 24101
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131458 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 131399 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 131398 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcgg 131339 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131338 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 131279 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131278 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 131219 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 131218 cttttcaagtcc 131207 Score = 460 bits (232), Expect = e-126 Identities = 247/252 (98%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103464 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 103523 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 103524 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcgg 103583 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103584 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 103643 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103644 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 103703 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 103704 cttttcaagtcc 103715
>emb|AM159480.1| Uncultured bacterium 16S rRNA gene, clone RB90b-43 Length = 1095 Score = 456 bits (230), Expect = e-125 Identities = 247/252 (98%), Gaps = 3/252 (1%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 451 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 452 ctgacggagcaatgccgcgtggagg---aaggcccacgggtcgtcaacttcttttctcgg 508 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 509 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 568 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 628 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 629 cttttcaagtcc 640
>emb|AM159428.1| Uncultured bacterium 16S rRNA gene, clone RB45-22e Length = 997 Score = 456 bits (230), Expect = e-125 Identities = 250/254 (98%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 344 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttctttt-ctcg 119 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 345 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttcctcg 404 Query: 120 gagaagaaacaatgacggtatctgaggaataagcatcggctaac-tctgtgccggcagcc 178 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 405 gagaagaaacaatgacggtatctgaggaataagcatcggctaacttctgtgccagcagcc 464 Query: 179 gcggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggt 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 gcggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggt 524 Query: 239 ggcttttcaagtcc 252 |||||||||||||| Sbjct: 525 ggcttttcaagtcc 538
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 452 bits (228), Expect = e-124 Identities = 246/252 (97%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 127089 gacacggcccagactcctacgggaggcagcagtggggaattttccacaatgggcgaaagc 127030 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 127029 ctgacggagcaatgttgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 126970 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 126969 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 126910 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 126909 ggtaagacagaggatgcaagcattatccggaatgattgggcgtaaagcgtctgtaggtgg 126850 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 126849 cttttcaagtcc 126838
>gb|AY191350.1| Uncultured marine eukaryote isolate ODP1176A22X_6_B 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 828 Score = 452 bits (228), Expect = e-124 Identities = 246/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 270 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggtgaaagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| Sbjct: 330 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcga 389 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 390 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 449 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 509 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 510 cttttcaagtcc 521
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 452 bits (228), Expect = e-124 Identities = 246/252 (97%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143076 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 143017 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | | Sbjct: 143016 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccag 142957 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 142956 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 142897 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142896 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 142837 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 142836 cttttcaagtcc 142825 Score = 452 bits (228), Expect = e-124 Identities = 246/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106869 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 106928 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | | Sbjct: 106929 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccag 106988 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106989 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 107048 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107049 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 107108 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 107109 cttttcaagtcc 107120
>gb|AY168732.2| Angiosperm environmental sample clone Hot Creek 1 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1451 Score = 452 bits (228), Expect = e-124 Identities = 246/252 (97%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1163 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 1104 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||| Sbjct: 1103 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttctcgg 1044 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1043 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 984 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 924 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 923 cttttcaagtcc 912
>emb|AM159430.1| Uncultured bacterium 16S rRNA gene, clone RB45-24e Length = 991 Score = 446 bits (225), Expect = e-122 Identities = 248/253 (98%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 285 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaaggggcgaaagc 344 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 345 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 404 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaac-tctgtgccggcagccg 179 ||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 405 agaagaaacaatgacggtatctgaggaataagc-tcggctaacttctgtgccagcagccg 463 Query: 180 cggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 cggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 523 Query: 240 gcttttcaagtcc 252 ||||||||||||| Sbjct: 524 gcttttcaagtcc 536
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145747 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 145688 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 145687 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 145628 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 145627 agaagaagcaatgacggtatccgaggaataagcatcggctaactctgtgccagcagccgc 145568 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145567 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 145508 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 145507 cttttcaagtcc 145496 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107910 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 107969 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 107970 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 108029 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 108030 agaagaagcaatgacggtatccgaggaataagcatcggctaactctgtgccagcagccgc 108089 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108090 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 108149 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 108150 cttttcaagtcc 108161
>gb|AY102879.1| Uncultured embryophyte clone BCM1-32B 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 685 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 348 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||| Sbjct: 349 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttctcgg 408 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 409 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 468 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 528 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 529 cttttcaagtcc 540
>emb|AJ867655.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact67 Length = 1453 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 328 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 329 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 388 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 389 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 448 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 508 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 509 cttttcaagtcc 520
>emb|AJ867653.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact62 Length = 1448 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 328 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 329 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 388 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 389 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 448 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 508 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 509 cttttcaagtcc 520
>emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact35 Length = 1441 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 327 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 328 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 387 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 388 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 447 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 507 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 508 cttttcaagtcc 519
>emb|AJ867650.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact24 Length = 1440 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 327 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 328 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 387 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 388 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 447 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 507 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 508 cttttcaagtcc 519
>emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact22 Length = 1416 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 442 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 443 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 502 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 503 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 562 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 622 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 623 cttttcaagtcc 634
>emb|AJ867648.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact02 Length = 1503 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 377 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 378 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 437 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 438 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 497 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 557 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 558 cttttcaagtcc 569
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137836 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 137777 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 137776 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaacttcttttcccgg 137717 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 137716 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 137657 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137656 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 137597 Query: 241 cttttcaagtcc 252 ||| |||||||| Sbjct: 137596 cttgtcaagtcc 137585 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100135 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 100194 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 100195 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaacttcttttcccgg 100254 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 100255 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 100314 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100315 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 100374 Query: 241 cttttcaagtcc 252 ||| |||||||| Sbjct: 100375 cttgtcaagtcc 100386
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131896 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagc 131837 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 131836 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtaaactccttttctcgg 131777 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131776 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 131717 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131716 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 131657 Query: 241 cttttcaagtcc 252 ||| |||||||| Sbjct: 131656 cttctcaagtcc 131645 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 91551 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagc 91610 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 91611 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtaaactccttttctcgg 91670 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 91671 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 91730 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91731 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 91790 Query: 241 cttttcaagtcc 252 ||| |||||||| Sbjct: 91791 cttctcaagtcc 91802
>gb|U24590.1|PNU24590 Psilotum nudum chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 273 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagc 332 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 333 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtaaactccttttctcgg 392 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 393 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 452 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 512 Query: 241 cttttcaagtcc 252 ||| |||||||| Sbjct: 513 cttctcaagtcc 524
>gb|AY145639.1| Uncultured eukaryote FL10D12 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 699 Score = 444 bits (224), Expect = e-122 Identities = 245/252 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 347 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||| Sbjct: 348 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcgtgaacttcttttctcgg 407 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 408 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 467 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 527 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 528 cttttcaagtcc 539
>gb|DQ171558.1| Uncultured eukaryote clone WS08A_C04 16S ribosomal RNA gene, partial sequence; chloroplast Length = 769 Score = 438 bits (221), Expect = e-120 Identities = 247/253 (97%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 295 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttc-ttttctcg 119 |||||||||||||||||| ||||||| ||||||| ||||||||| |||||| |||||||| Sbjct: 296 ctgacggagcaatgccgc-tggaggtagaaggcccacgggtcgtgaacttcgttttctcg 354 Query: 120 gagaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 355 gagaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccg 414 Query: 180 cggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 cggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 474 Query: 240 gcttttcaagtcc 252 ||||||||||||| Sbjct: 475 gcttttcaagtcc 487
>gb|AY827071.1| Uncultured Oscillatoriales cyanobacterium clone X20 16S ribosomal RNA gene, partial sequence Length = 452 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 152 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagc 211 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 212 ctgacggagcaatgccgcgtggaggaagaaagcctacgggtcgtaaacttcttttctcgg 271 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 272 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 331 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 332 ggtaagacagaggatgcaagcgttatccgggatgattgggcgtaaagcgtctgtaggtgg 391 Query: 241 cttttcaagtcc 252 |||| ||||||| Sbjct: 392 ctttgcaagtcc 403
>gb|AF526941.1| Uncultured angiosperm clone T5-20 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1497 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1210 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 1151 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1150 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 1091 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 1090 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 1031 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1030 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 971 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 970 ctttttaagtcc 959
>gb|AY523534.1| Fragaria x ananassa 16S ribosomal RNA gene, partial sequence; chloroplast Length = 591 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 294 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 295 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 354 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 355 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 414 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 474 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 475 ctttttaagtcc 486
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139382 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 139323 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 139322 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 139263 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 139262 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 139203 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139202 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 139143 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 139142 ctttttaagtcc 139131 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102527 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 102586 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 102587 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 102646 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 102647 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 102706 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102707 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 102766 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 102767 ctttttaagtcc 102778
>gb|DQ129644.1| Uncultured bacterium clone AKIW961 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 345 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 346 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 405 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 406 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 465 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 525 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 526 ctttttaagtcc 537
>gb|DQ129643.1| Uncultured bacterium clone AKIW940 16S ribosomal RNA gene, partial sequence Length = 1447 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 347 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 348 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 407 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 408 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 467 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 527 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 528 ctttttaagtcc 539
>gb|DQ129642.1| Uncultured bacterium clone AKIW415 16S ribosomal RNA gene, partial sequence Length = 1449 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 346 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 347 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 406 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 407 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 466 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 526 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 527 ctttttaagtcc 538
>gb|DQ417652.1| Glechoma hederacea 16S ribosomal RNA gene, partial sequence; plastid Length = 1403 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 320 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 321 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 380 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 381 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 440 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 500 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 501 ctttttaagtcc 512
>gb|DQ000201.1| Trewia nudiflora 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1434 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 341 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 342 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 401 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 402 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 461 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 521 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 522 ctttttaagtcc 533
>gb|AY707538.1| Uncultured organism clone A89 16S ribosomal RNA gene, partial sequence Length = 581 Score = 436 bits (220), Expect = e-119 Identities = 235/240 (97%) Strand = Plus / Plus Query: 13 actcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 actcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaa 60 Query: 73 tgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaat 132 |||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||| Sbjct: 61 tgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaagcaat 120 Query: 133 gacggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagag 192 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 121 gacggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagag 180 Query: 193 gatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 240
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42620 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 42679 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 42680 ctgacggagcaatgccgcgtggaggtcgaaggcccacgggtcgtgaacttcttttcccgg 42739 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 42740 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 42799 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42800 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 42859 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 42860 ctttttaagtcc 42871
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139657 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 139598 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 139597 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 139538 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 139537 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 139478 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139477 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 139418 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 139417 ctttttaagtcc 139406 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102750 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 102809 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 102810 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 102869 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 102870 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 102929 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102930 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 102989 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 102990 ctttttaagtcc 103001
>gb|U24595.1|TOU24595 Tmesipteris oblanceolata chloroplast 16S rRNA gene, partial sequence Length = 1436 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 275 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagc 334 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 335 ctgacggagcaatgccgcgtggaggaagaaggcctacgggtcgtaaactccttttctcgg 394 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 395 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 454 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 514 Query: 241 cttttcaagtcc 252 ||| |||||||| Sbjct: 515 cttctcaagtcc 526
>gb|L37580.1|RCNRGD Ricinis communis 16S ribosomal RNA (16S rRNA) gene Length = 1423 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 333 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 334 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 393 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 394 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 453 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 513 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 514 ctttttaagtcc 525
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 436 bits (220), Expect = e-119 Identities = 244/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84636 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 84695 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 84696 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 84755 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84756 agaagaaaaaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 84815 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84816 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 84875 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 84876 cttttcaagtcc 84887
>gb|AF393588.1| Climacium dendroides small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 434 bits (219), Expect = e-119 Identities = 243/251 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 333 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 334 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 393 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 394 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 453 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 513 Query: 241 cttttcaagtc 251 ||||| ||||| Sbjct: 514 ctttttaagtc 524
>emb|AM159434.1| Uncultured bacterium 16S rRNA gene, clone RB45-28 Length = 995 Score = 434 bits (219), Expect = e-119 Identities = 246/253 (97%), Gaps = 4/253 (1%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 285 gacacggcccagactcctacgggaggcagc---ggggaattttccgcaatgggcgaaagc 341 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 342 ctgacggagcaatgccgcgtggaggtggaaggcccacgggtcgtcaacttcttttctcgg 401 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggc-taactctgtgccggcagccg 179 ||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| Sbjct: 402 agaagaaacaatgacggtatctgaggaataagcttcggcttaactctgtgccagcagccg 461 Query: 180 cggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 cggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 521 Query: 240 gcttttcaagtcc 252 ||||||||||||| Sbjct: 522 gcttttcaagtcc 534
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 434 bits (219), Expect = e-119 Identities = 243/251 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121447 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 121388 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 121387 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 121328 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 121327 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 121268 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121267 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 121208 Query: 241 cttttcaagtc 251 ||||| ||||| Sbjct: 121207 ctttttaagtc 121197 Score = 434 bits (219), Expect = e-119 Identities = 243/251 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86655 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 86714 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 86715 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 86774 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86775 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 86834 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86835 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 86894 Query: 241 cttttcaagtc 251 ||||| ||||| Sbjct: 86895 ctttttaagtc 86905
>gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 434 bits (219), Expect = e-119 Identities = 243/251 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||| ||| Sbjct: 330 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttcccgg 389 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 390 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 449 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 509 Query: 241 cttttcaagtc 251 ||||||||||| Sbjct: 510 cttttcaagtc 520
>gb|AY818945.1| Plantago rugelii 16S ribosomal RNA (rrn16) gene, partial sequence; chloroplast Length = 1402 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 317 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| | | Sbjct: 318 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccag 377 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 378 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 437 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 497 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 498 ctttttaagtcc 509
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143142 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 143083 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 143082 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 143023 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 143022 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 142963 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142962 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 142903 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 142902 ctttttaagtcc 142891 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105955 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 106014 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 106015 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 106074 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 106075 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 106134 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106135 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 106194 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 106195 ctttttaagtcc 106206
>gb|BT014415.1| Lycopersicon esculentum clone 133723R, mRNA sequence Length = 1449 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 477 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 478 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 537 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 538 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 597 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 657 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 658 ctttttaagtcc 669
>gb|AF128638.1| Uncultured soil bacterium C051 16S ribosomal RNA, partial sequence Length = 590 Score = 428 bits (216), Expect = e-117 Identities = 244/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 294 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 295 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 354 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 355 agaagaaa-aatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 413 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 473 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 474 cttttcaagtcc 485
>gb|AY043964.1| Uncultured embryophyte plastid clone NOW2.115WL 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 518 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 318 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 319 ctgacggagcaatgccgcgtggaggtagagggcctacgggtcgtgaacttcttttcccgg 378 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 379 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 438 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 498 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 499 ctttttaagtcc 510
>gb|AY795633.2| Uncultured Oscillatoriales cyanobacterium clone Veg.-frei_9_29.07 16S ribosomal RNA gene, partial sequence Length = 646 Score = 428 bits (216), Expect = e-117 Identities = 244/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 328 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 329 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 388 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 389 agaagaaa-aatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 447 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 507 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 508 cttttcaagtcc 519
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139572 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 139513 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 139512 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 139453 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 139452 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 139393 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139392 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 139333 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 139332 ctttttaagtcc 139321 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103058 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 103117 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 103118 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 103177 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 103178 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 103237 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103238 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 103297 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 103298 ctttttaagtcc 103309
>emb|AM086239.1| Pinus thunbergii plastid 16S rRNA gene, isolate 20 0D6 Length = 924 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 270 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 271 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 330 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 331 agaagaaaaaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 390 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 391 ggtaagacagaggatgcaagcgttatccggaatgattgggcgcaaagcgtctgtaggtgg 450 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 451 cttttcaagtcc 462
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135115 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 135056 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 135055 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 134996 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 134995 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 134936 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134935 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 134876 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 134875 ctttttaagtcc 134864 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99520 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 99579 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 99580 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 99639 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 99640 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 99699 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99700 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 99759 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 99760 ctttttaagtcc 99771
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143971 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 143912 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 143911 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 143852 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 143851 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 143792 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143791 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 143732 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 143731 ctttttaagtcc 143720 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106089 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 106148 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 106149 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 106208 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 106209 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 106268 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106269 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 106328 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 106329 ctttttaagtcc 106340
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140192 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 140133 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 140132 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 140073 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 140072 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 140013 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140012 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 139953 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 139952 ctttttaagtcc 139941 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103365 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 103424 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 103425 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 103484 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 103485 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 103544 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103545 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 103604 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 103605 ctttttaagtcc 103616
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138934 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 138875 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 138874 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 138815 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 138814 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 138755 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138754 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 138695 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 138694 ctttttaagtcc 138683 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102102 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 102161 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 102162 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 102221 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 102222 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 102281 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102282 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 102341 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 102342 ctttttaagtcc 102353
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 428 bits (216), Expect = e-117 Identities = 244/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82548 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 82607 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 82608 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 82667 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 82668 agaagaaa-aatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 82726 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82727 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 82786 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 82787 cttttcaagtcc 82798
>gb|AY707580.1| Uncultured organism clone C87 16S ribosomal RNA gene, partial sequence Length = 581 Score = 428 bits (216), Expect = e-117 Identities = 234/240 (97%) Strand = Plus / Plus Query: 13 actcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaa 72 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 actcctacgggaggcagcagtggggagttttccgcaatgggcgaaagcctgacggagcaa 60 Query: 73 tgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaat 132 |||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||| Sbjct: 61 tgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaagcaat 120 Query: 133 gacggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagag 192 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 121 gacggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagag 180 Query: 193 gatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 240
>gb|AY707557.1| Uncultured organism clone B87 16S ribosomal RNA gene, partial sequence Length = 581 Score = 428 bits (216), Expect = e-117 Identities = 234/240 (97%) Strand = Plus / Plus Query: 13 actcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 actcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaa 60 Query: 73 tgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaat 132 |||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||| Sbjct: 61 tgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaagcaat 120 Query: 133 gacggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagag 192 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 121 gacggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagag 180 Query: 193 gatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 181 gatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcctttcaagtcc 240
>gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1452 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 348 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| ||| Sbjct: 349 ctgacggagcaatgccgcgtggaggtagaaggcttacgggtcgtgaacttcttttcccgg 408 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 409 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 468 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 528 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 529 ctttttaagtcc 540
>gb|AF393613.1| Sphagnum rubellum small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1467 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 332 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 333 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 392 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 393 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 452 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 512 Query: 241 cttttcaagtcc 252 ||| | |||||| Sbjct: 513 cttcttaagtcc 524
>gb|AY917772.1| Uncultured bacterium clone 1971a-16 16S ribosomal RNA gene, partial sequence Length = 755 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 298 gacacggcccagactcctacgggaggcagcagtggggaatcttccgcaatgggcgaaagc 357 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||| Sbjct: 358 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcgg 417 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 418 agaagaatcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 477 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 537 Query: 241 cttttcaagtcc 252 || || |||||| Sbjct: 538 ctctttaagtcc 549
>gb|U46209.1|AGU46209 Alnus glutinosa 16S rRNA gene, chloroplast gene encoding chloroplast rRNA, partial sequence Length = 996 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 292 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 293 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 352 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 353 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 412 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 472 Query: 241 cttt 244 |||| Sbjct: 473 cttt 476
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140192 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 140133 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 140132 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 140073 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 140072 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 140013 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140012 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 139953 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 139952 ctttttaagtcc 139941 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102233 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 102292 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 102293 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 102352 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 102353 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 102412 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102413 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 102472 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 102473 ctttttaagtcc 102484
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139070 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 139011 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 139010 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 138951 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 138950 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 138891 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138890 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 138831 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 138830 ctttttaagtcc 138819 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102273 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 102332 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 102333 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 102392 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 102393 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 102452 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102453 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 102512 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 102513 ctttttaagtcc 102524
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139068 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 139009 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 139008 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 138949 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 138948 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 138889 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138888 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 138829 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 138828 ctttttaagtcc 138817 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102270 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 102329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 102330 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 102389 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 102390 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 102449 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102450 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 102509 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 102510 ctttttaagtcc 102521
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138979 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 138920 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 138919 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 138860 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 138859 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 138800 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138799 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 138740 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 138739 ctttttaagtcc 138728 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102149 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 102208 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 102209 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 102268 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 102269 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 102328 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102329 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 102388 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 102389 ctttttaagtcc 102400
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139570 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 139511 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 139510 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 139451 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 139450 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 139391 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139390 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 139331 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 139330 ctttttaagtcc 139319 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103056 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 103115 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 103116 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 103175 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 103176 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 103235 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103236 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 103295 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 103296 ctttttaagtcc 103307
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139311 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 139252 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 139251 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 139192 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 139191 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 139132 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139131 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 139072 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 139071 ctttttaagtcc 139060 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102827 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 102886 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 102887 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 102946 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 102947 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 103006 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103007 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 103066 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 103067 ctttttaagtcc 103078
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143322 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 143263 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 143262 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 143203 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 143202 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 143143 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143142 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 143083 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 143082 ctttttaagtcc 143071 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105977 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 106036 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 106037 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 106096 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 106097 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 106156 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106157 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 106216 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 106217 ctttttaagtcc 106228
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138948 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 138889 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 138888 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 138829 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 138828 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 138769 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138768 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 138709 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 138708 ctttttaagtcc 138697 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102114 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 102173 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 102174 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 102233 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 102234 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 102293 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102294 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 102353 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 102354 ctttttaagtcc 102365
>emb|X95278.1|AGCH16SRR A.glutinosa chloroplast 16S ribosomal RNA Length = 996 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 292 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 293 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 352 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 353 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 412 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 472 Query: 241 cttt 244 |||| Sbjct: 473 cttt 476
>gb|U24592.1|SPU24592 Sphagnum palustre chloroplast 16S rRNA gene, partial sequence Length = 1435 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 328 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 329 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 388 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 389 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 448 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 508 Query: 241 cttttcaagtcc 252 ||| | |||||| Sbjct: 509 cttcttaagtcc 520
>gb|U24585.1|IMU24585 Isoetes melanopoda chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 330 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||| Sbjct: 331 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcgg 390 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 391 agaagaagcaatgacggtatctgaggaataagcatcggctaaccctgtgccagcagccgc 450 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 510 Query: 241 cttttcaagtcc 252 ||| ||||||| Sbjct: 511 cttcgcaagtcc 522
>gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||| ||| Sbjct: 330 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttcccgg 389 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 390 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 449 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 509 Query: 241 cttttcaagtcc 252 ||| |||||||| Sbjct: 510 cttctcaagtcc 521
>emb|AJ252712.1|PPL252712 Solanum tuberosum leukoplast 16S rRNA gene (partial) clone RC-III-13 Length = 1008 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 356 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 357 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 416 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 417 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 476 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 536 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 537 ctttttaagtcc 548
>gb|M82900.1|TOBCP16SRD Nicotiana plumbaginifolia 16S rRNA gene Length = 1490 Score = 428 bits (216), Expect = e-117 Identities = 243/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 356 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 357 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 416 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 417 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 476 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 536 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 537 ctttttaagtcc 548
>gb|AF244558.1|AF244558 Megaceros aenigmaticus 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 426 bits (215), Expect = e-116 Identities = 243/251 (96%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 359 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||| | Sbjct: 360 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttcttag 418 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 419 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 478 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 538 Query: 241 cttttcaagtc 251 ||||||||||| Sbjct: 539 cttttcaagtc 549
>dbj|AK059310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G07, full insert sequence Length = 1098 Score = 426 bits (215), Expect = e-116 Identities = 221/223 (99%) Strand = Plus / Plus Query: 30 cagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccgcgtggaggtgga 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccgcgtggaggtgga 60 Query: 90 aggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacggtatctgaggaat 149 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacggtatctgaggaat 120 Query: 150 aagcatcggctaactctgtgccggcagccgcggtaagacagaggatgcaagcgttatccg 209 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcatcggctaactctgtgccagcagccgcggtaagacagaggatgcaagcgttatccg 180 Query: 210 gaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 223
>gb|L37578.1|ADQRGD Adriana glabrata 16S ribosomal RNA (16S rRNA) gene Length = 1428 Score = 426 bits (215), Expect = e-116 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 323 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 324 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 383 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 384 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 443 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 444 ggtaatacagaggatncaagcgtwatccggaatgattgggcgtaaagcgtctgtaggtgg 503 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 504 ctttttaagtcc 515
>gb|AY043965.1| Uncultured embryophyte plastid clone SMW4.10WL 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 508 Score = 424 bits (214), Expect = e-116 Identities = 235/242 (97%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 326 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 327 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 386 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 387 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 446 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 506 Query: 241 ct 242 || Sbjct: 507 ct 508
>gb|AY806039.1| Angiosperm environmental sample clone BL004B64 16S ribosomal RNA gene, partial sequence Length = 740 Score = 422 bits (213), Expect = e-115 Identities = 244/253 (96%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 291 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 292 ttgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 351 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgcc-ggcagccg 179 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 352 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccaggcagccg 411 Query: 180 cggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 239 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 cggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 471 Query: 240 gcttttcaagtcc 252 |||||| |||||| Sbjct: 472 gctttttaagtcc 484
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4503 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 4562 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||| ||| Sbjct: 4563 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttcccgg 4622 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 4623 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 4682 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4683 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 4742 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 4743 ctttttaagtcc 4754
>gb|AY827072.1| Uncultured Oscillatoriales cyanobacterium clone X26 16S ribosomal RNA gene, partial sequence Length = 452 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 152 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagc 211 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 212 ctgacggagcaatgccgcgtggaggaagaaagcctacgggtcgtaaacttcttttctcgg 271 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 272 agaggaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 331 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 332 ggtaagacagaggacgcaagcgttatccgggatgattgggcgtaaagcgtctgtaggtgg 391 Query: 241 cttttcaagtcc 252 |||| ||||||| Sbjct: 392 ctttgcaagtcc 403
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136385 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 136326 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||| ||| Sbjct: 136325 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttcccgg 136266 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 136265 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 136206 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136205 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 136146 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 136145 ctttttaagtcc 136134 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100493 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 100552 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||| ||| Sbjct: 100553 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttcccgg 100612 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 100613 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 100672 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100673 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 100732 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 100733 ctttttaagtcc 100744
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135202 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 135143 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 135142 ctgacggagcaatgccgcgtggaggcagaaggcccacgggtcgtgaacttcttttcccgg 135083 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 135082 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 135023 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135022 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 134963 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 134962 ctttttaagtcc 134951 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98243 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 98302 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 98303 ctgacggagcaatgccgcgtggaggcagaaggcccacgggtcgtgaacttcttttcccgg 98362 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 98363 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 98422 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98423 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 98482 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 98483 ctttttaagtcc 98494
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136385 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 136326 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| | | Sbjct: 136325 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcctgaacttcttttcccag 136266 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 136265 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 136206 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136205 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 136146 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 136145 ctttttaagtcc 136134 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100379 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 100438 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| | | Sbjct: 100439 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcctgaacttcttttcccag 100498 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 100499 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 100558 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100559 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 100618 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 100619 ctttttaagtcc 100630
>gb|AF244554.1|AF244554 Ginkgo biloba 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1455 Score = 420 bits (212), Expect = e-115 Identities = 243/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 338 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 339 -tgacggagcaatgccgcgtgaaggtagaaggcccacgggtcgtgaacttcttttcccgg 397 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 398 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 457 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 517 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 518 cttttcaagtcc 529
>gb|AY806051.1| Angiosperm environmental sample clone BL004B83 16S ribosomal RNA gene, partial sequence Length = 755 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 236 gacacggcccagactcctacgggaggcagcagtggggaattttccgcagtgggcgaaagc 295 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 296 ttgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 355 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 356 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 415 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 475 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 476 ctttttaagtcc 487
>gb|AY904436.1| Tracheophyte environmental sample clone Ben6 16S ribosomal RNA gene, partial sequence; chloroplast Length = 808 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 298 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||| ||| Sbjct: 299 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttcccgg 358 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 359 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 418 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 478 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 479 ctttttaagtcc 490
>gb|AF061065.1|AF061065 Plastid transformation vector pGS31A 16S ribosomal RNA gene, partial sequence; aminoglycoside 3'-adenyltransferase (aadA) gene, complete cds Length = 3136 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 245 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| | | Sbjct: 244 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcctgaacttcttttcccag 185 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 184 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 125 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 65 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 64 ctttttaagtcc 53
>emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact33 Length = 1476 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 361 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 362 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 421 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 422 agaggaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 481 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 482 ggtaagacagaggatgcaagcgctatccggaatgattgggtgtaaagcgtctgtaggtgg 541 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 542 cttttcaagtcc 553
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137341 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 137282 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| | | Sbjct: 137281 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcctgaacttcttttcccag 137222 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 137221 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 137162 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137161 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 137102 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 137101 ctttttaagtcc 137090 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101308 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 101367 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| | | Sbjct: 101368 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcctgaacttcttttcccag 101427 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 101428 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 101487 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101488 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 101547 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 101548 ctttttaagtcc 101559
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136378 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 136319 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||| ||| Sbjct: 136318 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttcccgg 136259 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 136258 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 136199 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136198 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 136139 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 136138 ctttttaagtcc 136127 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100491 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 100550 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||| ||| Sbjct: 100551 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttcccgg 100610 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 100611 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 100670 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100671 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 100730 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 100731 ctttttaagtcc 100742
>emb|AJ007728.1|OMI007728 Orobanche minor chloroplast trnV(GAC) gene, 16S rRNA gene, trnI(GAU) pseudogene, trnA(UGC) pseudogene and partial 23S rRNA gene Length = 2604 Score = 420 bits (212), Expect = e-115 Identities = 243/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 707 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 708 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 766 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 767 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 826 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 886 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 887 ctttttaagtcc 898
>gb|U24588.1|LJU24588 Lygodium japonicum chloroplast 16S rRNA gene, partial sequence Length = 1437 Score = 420 bits (212), Expect = e-115 Identities = 242/252 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 270 gacacggcccagactcctacgggaggcagcagtggggaatcttccgcaatgggcgaaagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||| Sbjct: 330 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcgg 389 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 390 agaagaagcaatgacggtatctgaagaataagcatcggctaactctgtgccagcagccgc 449 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 509 Query: 241 cttttcaagtcc 252 || || |||||| Sbjct: 510 ctctttaagtcc 521
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 418 bits (211), Expect = e-114 Identities = 241/251 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 333 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| |||||| || |||| ||||||| | Sbjct: 334 ctgacggagcaatgccgcgtggaggtagaaggcccacgggttgtaaactccttttcttag 393 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 394 agaagaagcaatgacggtatctaaggaataagcatcggctaactctgtgccagcagccgc 453 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 513 Query: 241 cttttcaagtc 251 ||||||||||| Sbjct: 514 cttttcaagtc 524
>gb|AF244561.1|AF244561 Phaeoceros laevis 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 418 bits (211), Expect = e-114 Identities = 242/251 (96%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 359 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||| | Sbjct: 360 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttcttag 418 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 419 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 478 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 538 Query: 241 cttttcaagtc 251 ||||||||||| Sbjct: 539 cttttcaagtc 549
>dbj|AB087477.1| Anthoceros formosae chloroplast 16S rRNA, complete sequence Length = 1614 Score = 418 bits (211), Expect = e-114 Identities = 241/251 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 372 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| |||||| || |||| ||||||| | Sbjct: 373 ctgacggagcaatgccgcgtggaggtagaaggcccacgggttgtaaactccttttcttag 432 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 433 agaagaagcaatgacggtatctaaggaataagcatcggctaactctgtgccagcagccgc 492 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 552 Query: 241 cttttcaagtc 251 ||||||||||| Sbjct: 553 cttttcaagtc 563
>emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact63 Length = 1442 Score = 418 bits (211), Expect = e-114 Identities = 242/251 (96%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 327 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||||||||| Sbjct: 328 ctgacggagcaatgccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcgg 387 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 388 agaagaaacaatggcggtatctgaggaataagcatcggctaactctgtgccagcagccgc 447 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgta-ggtg 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 448 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtagggtg 507 Query: 240 gcttttcaagt 250 ||||||||||| Sbjct: 508 gcttttcaagt 518
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 418 bits (211), Expect = e-114 Identities = 241/251 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154861 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 154802 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| |||||| || |||| ||||||| | Sbjct: 154801 ctgacggagcaatgccgcgtggaggtagaaggcccacgggttgtaaactccttttcttag 154742 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 154741 agaagaagcaatgacggtatctaaggaataagcatcggctaactctgtgccagcagccgc 154682 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154681 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 154622 Query: 241 cttttcaagtc 251 ||||||||||| Sbjct: 154621 cttttcaagtc 154611 Score = 418 bits (211), Expect = e-114 Identities = 241/251 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113805 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 113864 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| |||||| || |||| ||||||| | Sbjct: 113865 ctgacggagcaatgccgcgtggaggtagaaggcccacgggttgtaaactccttttcttag 113924 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 113925 agaagaagcaatgacggtatctaaggaataagcatcggctaactctgtgccagcagccgc 113984 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113985 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 114044 Query: 241 cttttcaagtc 251 ||||||||||| Sbjct: 114045 cttttcaagtc 114055
>gb|AY895148.1| Chloroplast transformation vector pCLT327 Cry1Ab (cry1Ab) and AadA (aadA) genes, complete cds; tRNA-Val gene, complete sequence; and 16S ribosomal RNA, partial sequence Length = 8483 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7458 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 7517 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||| ||| Sbjct: 7518 ctgacggagcaatgccgcgtgaaggtagaaggcctacgggtcatgaacttcttttcccgg 7577 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 7578 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 7637 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7638 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 7697 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 7698 ctttttaagt 7707
>gb|DQ417653.1| Trifolium repens 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gacaaggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 320 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| |||||||||||||| | ||||||||||| ||| Sbjct: 321 ctgacggagcaatgccgcgtggaggtaaaaggcctacgggtcatgaacttcttttcccgg 380 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 381 agaagaaacaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 440 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 500 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 501 ctttttaagt 510
>gb|AF419246.1|AF419246 Medicago sativa 16S ribosomal RNA gene, partial sequence Length = 633 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 gacaaggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 413 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| |||||||||||||| | ||||||||||| || Sbjct: 412 ctgacggagcaatgccgcgtggaggtaaaaggcctacgggtcatgaacttcttttcctgg 353 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 352 agaagaaacaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 293 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 233 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 232 ctttttaagt 223
>gb|AF393583.1| Chaetosphaeridium globosum SAG 26.98 small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1461 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 326 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| || Sbjct: 327 ctgacggagcaatgccgcgtggaggatgaaggcccacgggtcgtaaacttcttttcttgg 386 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 387 agaagaatcaatgacggtatccgaggaataagcatcggctaactctgtgccagcagccgc 446 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 506 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 507 ctttttaagt 516
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135496 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 135437 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||| ||| Sbjct: 135436 ctgacggagcaatgccgcgtgaaggtagaaggcctacgggtcatgaacttcttttcccgg 135377 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 135376 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 135317 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135316 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 135257 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 135256 ctttttaagt 135247 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99898 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 99957 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||| ||| Sbjct: 99958 ctgacggagcaatgccgcgtgaaggtagaaggcctacgggtcatgaacttcttttcccgg 100017 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 100018 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 100077 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100078 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 100137 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 100138 ctttttaagt 100147
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133911 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 133852 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 133851 ctgacggagcaatgccgcgtggaggtagagggcctacgggtcgtgaacttcttttccagg 133792 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 133791 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 133732 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133731 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 133672 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 133671 ctttttaagt 133662 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98545 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 98604 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 98605 ctgacggagcaatgccgcgtggaggtagagggcctacgggtcgtgaacttcttttccagg 98664 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 98665 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 98724 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98725 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 98784 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 98785 ctttttaagt 98794
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128134 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 128075 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| || Sbjct: 128074 ctgacggagcaatgccgcgtggaggatgaaggcccacgggtcgtaaacttcttttcttgg 128015 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 128014 agaagaatcaatgacggtatccgaggaataagcatcggctaactctgtgccagcagccgc 127955 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127954 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 127895 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 127894 ctttttaagt 127885 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91732 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 91791 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| || Sbjct: 91792 ctgacggagcaatgccgcgtggaggatgaaggcccacgggtcgtaaacttcttttcttgg 91851 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 91852 agaagaatcaatgacggtatccgaggaataagcatcggctaactctgtgccagcagccgc 91911 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91912 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 91971 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 91972 ctttttaagt 91981
>gb|AY575999.1| Chloroplast transformation vector pCLT312, plastid targeting sequence Length = 4508 Score = 416 bits (210), Expect = e-113 Identities = 240/250 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3483 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 3542 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||| ||| Sbjct: 3543 ctgacggagcaatgccgcgtgaaggtagaaggcctacgggtcatgaacttcttttcccgg 3602 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 3603 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 3662 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3663 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 3722 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 3723 ctttttaagt 3732
>gb|U24594.1|OCU24594 Osmunda cinnamomea var. fokiensis chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 416 bits (210), Expect = e-113 Identities = 234/242 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 270 gacacggcccagactcctacgggaggcagcagtggggaatcttccgcaatgggcgaaagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||| Sbjct: 330 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcgg 389 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 390 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 449 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ggtaagacaggggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 509 Query: 241 ct 242 || Sbjct: 510 ct 511
>gb|U24582.1|CGU24582 Cibotium glaucum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 416 bits (210), Expect = e-113 Identities = 234/242 (96%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 270 gacacggcccagactcctacgggaggcagcagtggggaatcttccgcaatgggcgaaagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||| Sbjct: 330 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcgg 389 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 390 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 449 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ggtaagacaggggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 509 Query: 241 ct 242 || Sbjct: 510 ct 511
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 414 bits (209), Expect = e-113 Identities = 239/249 (95%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||| Sbjct: 21139 gacatggcccagactcctacgggaggcagcaatgtggaattttccgcaatgggagaaagc 21080 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 21079 ctgacggagcaatgctgtgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 21020 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 21019 agaagaaacaatgacggtatctgaggaataagcatcggctaactctatgccagcagccgt 20960 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 20959 ggtaagacagaggatgcaagcgttatccggaatgattaggcgtaaagcgtctgtaggtgg 20900 Query: 241 cttttcaag 249 ||||||||| Sbjct: 20899 cttttcaag 20891
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 414 bits (209), Expect = e-113 Identities = 239/249 (95%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||| Sbjct: 90062 gacatggcccagactcctacgggaggcagcaatgtggaattttccgcaatgggagaaagc 90003 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 90002 ctgacggagcaatgctgtgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 89943 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 89942 agaagaaacaatgacggtatctgaggaataagcatcggctaactctatgccagcagccgt 89883 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 89882 ggtaagacagaggatgcaagcgttatccggaatgattaggcgtaaagcgtctgtaggtgg 89823 Query: 241 cttttcaag 249 ||||||||| Sbjct: 89822 cttttcaag 89814
>gb|AF419692.1| Uncultured bacterium C1_B022 16S ribosomal RNA gene, partial sequence Length = 1461 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 9 ccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacgga 68 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 300 ccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacgga 358 Query: 69 gcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaa 128 |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 359 gcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaaa 418 Query: 129 caatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagac 188 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 419 caatgacgttatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagac 478 Query: 189 agaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaa 248 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 agagggtgcaagcgtaatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaa 538 Query: 249 gtcc 252 |||| Sbjct: 539 gtcc 542
>emb|Y18934.1|CPY18934 Solanum nigrum chloroplast tRNA-Ala, tRNA-Ile, 16S rRNA, tRNA-Val, rps12, rps7, ndhB genes Length = 7829 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3264 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 3205 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 3204 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 3146 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 3145 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 3086 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3085 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 3026 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 3025 ctttttaagtcc 3014
>emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and 16S rDNA Length = 8807 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3453 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 3394 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 3393 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 3335 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 3334 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 3275 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3274 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 3215 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 3214 ctttttaagtcc 3203
>emb|AJ639615.1| Vitis vinifera plastid partial 16S rRNA gene Length = 1486 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 362 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 363 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 421 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 422 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 481 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 541 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 542 ctttttaagtcc 553
>gb|AF244563.1|AF244563 Polytrichum commune 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1486 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 358 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 359 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 417 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 418 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 477 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 537 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 538 ctttttaagtcc 549
>gb|AF244551.1|AF244551 Cycas revoluta 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1469 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 gacacagcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 345 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 346 -tgacggagcaatgccgcgtgaaggtagaaggcccacgggtcgtgaacttcttttcccgg 404 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 405 agaagaagcaatgacggtatccgaggaataagcatcggctaactctgtgccagcagccgc 464 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 524 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 525 cttttcaagtcc 536
>gb|AY806046.1| Angiosperm environmental sample clone BL004B76 16S ribosomal RNA gene, partial sequence Length = 756 Score = 412 bits (208), Expect = e-112 Identities = 241/252 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 294 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 295 ttgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 354 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 355 agaagaagcaatgacggtatctggagaataagcatcggctaactctgtgccagcagccgc 414 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 415 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtgaagcgtctgtaggtgg 474 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 475 ctttttaagtcc 486
>gb|DQ211347.1| Plastid transformation vector pPRV110L, complete sequence Length = 4128 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3101 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 3160 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 3161 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 3219 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 3220 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 3279 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3280 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 3339 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 3340 ctttttaagtcc 3351
>emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S ribosomal RNA, transfer RNA-Val and transfer RNA-Ile (5'exon) Length = 3274 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1523 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 1582 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 1583 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 1641 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 1642 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 1701 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1702 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 1761 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 1762 ctttttaagtcc 1773
>gb|U24587.1|LDU24587 Lycopodium digitatum chloroplast 16S rRNA gene, partial sequence Length = 1456 Score = 412 bits (208), Expect = e-112 Identities = 241/252 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 289 gacacggcccagactcctacgggaggcagcagtggggaattttctgcaatgggcgaaagc 348 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||| |||||||||||||||||||| ||||| | ||||||||| |||| |||||||| | Sbjct: 349 ctgacagagcaatgccgcgtggaggtagaaggtccacgggtcgtaaactccttttctcag 408 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 409 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 468 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 528 Query: 241 cttttcaagtcc 252 ||| | |||||| Sbjct: 529 cttcttaagtcc 540
>gb|U24593.1|EAU24593 Equisetum arvense chloroplast 16S rRNA gene, partial sequence Length = 1443 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 326 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 327 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 385 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 386 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 445 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 ggtaagacaggggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 505 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 506 ctttttaagtcc 517
>gb|U24580.1|AEU24580 Angiopteris evecta chloroplast 16S rRNA gene, partial sequence Length = 1447 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 330 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 388 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 389 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 448 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 508 Query: 241 cttttcaagtcc 252 ||| | |||||| Sbjct: 509 cttcttaagtcc 520
>gb|U12815.1|XXU12815 Transformation vector pPRV112B, plastid targeting segment Length = 4126 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 969 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 968 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 910 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 909 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 850 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 790 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 789 ctttttaagtcc 778
>gb|U12814.1|XXU12814 Transformation vector pPRV112A, plastid targeting segment Length = 4126 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 969 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 968 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 910 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 909 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 850 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 790 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 789 ctttttaagtcc 778
>gb|U12813.1|XXU12813 Transformation vector pPRV111B, plastid targeting segment Length = 4174 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 969 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 968 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 910 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 909 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 850 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 790 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 789 ctttttaagtcc 778
>gb|U12812.1|XXU12812 Transformation vector pPRV111A, plastid targeting segment Length = 4174 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 969 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 968 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 910 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 909 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 850 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 790 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 789 ctttttaagtcc 778
>gb|U12811.1|XXU12811 Transformation vector pPRV100B, plastid targeting segment Length = 3019 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 969 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 968 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 910 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 909 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 850 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 790 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 789 ctttttaagtcc 778
>gb|U12810.1|XXU12810 Transformation vector pPRV100A, plastid targeting segment Length = 3019 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 969 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 968 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 910 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 909 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 850 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 790 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 789 ctttttaagtcc 778
>gb|U12809.1|XXU12809 Transformation vector pPRV1, plastid targeting seqment Length = 2962 Score = 412 bits (208), Expect = e-112 Identities = 242/252 (96%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 969 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 968 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 910 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 909 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 850 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 790 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 789 ctttttaagtcc 778
>emb|AM039622.1| Pinus taeda partial 16S rRNA gene, clone 87A Length = 566 Score = 410 bits (207), Expect = e-112 Identities = 231/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>emb|AM039616.1| Pinus taeda partial 16S rRNA gene, clone 54A Length = 566 Score = 410 bits (207), Expect = e-112 Identities = 231/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>emb|AM039614.1| Pinus taeda partial 16S rRNA gene, clone 47A Length = 566 Score = 410 bits (207), Expect = e-112 Identities = 231/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>emb|AM039613.1| Pinus taeda partial 16S rRNA gene, clone 44A Length = 566 Score = 410 bits (207), Expect = e-112 Identities = 231/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>emb|AM039611.1| Pinus taeda partial 16S rRNA gene, clone 31A Length = 566 Score = 410 bits (207), Expect = e-112 Identities = 231/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>emb|AM039610.1| Pinus taeda partial 16S rRNA gene, clone 29A Length = 566 Score = 410 bits (207), Expect = e-112 Identities = 231/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>gb|AF244560.1|AF244560 Nymphaea tuberosa 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1463 Score = 408 bits (206), Expect = e-111 Identities = 231/238 (97%), Gaps = 1/238 (0%) Strand = Plus / Plus Query: 15 tcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatg 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 295 tcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatg 353 Query: 75 ccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatga 134 |||||||||||| ||||||||||||||||| ||||||||||| | |||||||| |||||| Sbjct: 354 ccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccagagaagaagcaatga 413 Query: 135 cggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagga 194 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 414 cggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagga 473 Query: 195 tgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 tgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 531
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 408 bits (206), Expect = e-111 Identities = 239/250 (95%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27083 gacaaggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 27024 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| |||||||||||||| | ||||||||||| || Sbjct: 27023 ctgacggagcaatgccgcgtggaggtaaaaggcctacgggtcatgaacttcttttcctgg 26964 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 26963 agaagaaacaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 26904 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26903 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 26844 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 26843 ctttttaagt 26834
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 408 bits (206), Expect = e-111 Identities = 239/250 (95%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83159 gacaaggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 83100 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| |||||||||||||| | ||||||||||| || Sbjct: 83099 ctgacggagcaatgccgcgtggaggtaaaaggcctacgggtcatgaacttcttttcctgg 83040 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 83039 agaagaaacaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 82980 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82979 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 82920 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 82919 ctttttaagt 82910
>emb|AJ007448.1|PVU7448 Phaseolus vulgaris 16S rRNA gene, clone 8360, partial Length = 1057 Score = 408 bits (206), Expect = e-111 Identities = 239/250 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 gacacggcccagacccctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 380 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||| ||| Sbjct: 381 ctgacggagcaatgccgcgtgaaggtagaaggcctacgggtcatgaacttcttttcccgg 440 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 441 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 500 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 560 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 561 ctttttaagt 570
>emb|AJ007447.1|PVU7447 Phaseolus vulgaris 16S rRNA gene, clone 8206, partial Length = 1012 Score = 408 bits (206), Expect = e-111 Identities = 239/250 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 334 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||| ||| Sbjct: 335 ctgacggagcaatgccgcgtgaaggtagaaggcctacgggtcatgaacttcttttcccgg 394 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||| ||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 395 agaagaagcaatgtcggtatccggggaataagcatcggctaactctgtgccagcagccgc 454 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 514 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 515 ctttttaagt 524
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 406 bits (205), Expect = e-110 Identities = 236/245 (96%), Gaps = 1/245 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147029 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 146970 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 146969 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 146911 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 146910 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 146851 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146850 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 146791 Query: 241 ctttt 245 ||||| Sbjct: 146790 ctttt 146786 Score = 406 bits (205), Expect = e-110 Identities = 236/245 (96%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106299 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 106358 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 106359 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 106417 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 106418 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 106477 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106478 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 106537 Query: 241 ctttt 245 ||||| Sbjct: 106538 ctttt 106542
>gb|AF393604.1| Nitella sp. CL-2002 small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1465 Score = 406 bits (205), Expect = e-110 Identities = 235/245 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 337 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| || | Sbjct: 338 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtaaactccttttttcag 397 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 | | |||| ||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 398 aaacgaaaaaatgacggtatctgaagaataagcatcggctaactctgtgccagcagccgc 457 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 517 Query: 241 ctttt 245 ||||| Sbjct: 518 ctttt 522
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 406 bits (205), Expect = e-110 Identities = 235/245 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 347 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| || | Sbjct: 348 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtaaactccttttttcag 407 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||| |||| |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 408 agacgaaatcatgacggtatctgaagaataagcatcggctaactctgtgccagcagccgc 467 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 527 Query: 241 ctttt 245 ||||| Sbjct: 528 ctttt 532
>gb|AF393585.1| Chara sp. CL-2002-1 small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1484 Score = 406 bits (205), Expect = e-110 Identities = 235/245 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 347 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| || | Sbjct: 348 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtaaactccttttttcag 407 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||| |||| |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 408 agacgaaatcatgacggtatctgaagaataagcatcggctaactctgtgccagcagccgc 467 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 527 Query: 241 ctttt 245 ||||| Sbjct: 528 ctttt 532
>gb|AF393580.1| Chara corallina small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1479 Score = 406 bits (205), Expect = e-110 Identities = 235/245 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 342 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| || | Sbjct: 343 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtaaactccttttttcag 402 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||| |||| |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 403 agacgaaatcatgacggtatctgaagaataagcatcggctaactctgtgccagcagccgc 462 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 522 Query: 241 ctttt 245 ||||| Sbjct: 523 ctttt 527
>emb|V00165.1|CHNTRN1 Tobacco chloroplast genes for 16S ribosomal RNA and tRNA-Val Length = 2113 Score = 406 bits (205), Expect = e-110 Identities = 241/252 (95%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 983 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 984 --gacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 1041 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 1042 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 1101 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1102 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 1161 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 1162 ctttttaagtcc 1173
>emb|X73670.1|CHDC16SRR D.carota chloroplast gene for tRNA-Val, 16S rRNA and tRNA-Ile (exon 1) Length = 2192 Score = 406 bits (205), Expect = e-110 Identities = 241/252 (95%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 656 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 657 --gacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 714 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 715 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 774 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 834 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 835 ctttttaagtcc 846
>emb|X75519.1|CSPL16SR Chara spec. plastid 16S rRNA gene Length = 1515 Score = 406 bits (205), Expect = e-110 Identities = 235/245 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 378 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| || | Sbjct: 379 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtaaactccttttttcag 438 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||| |||| |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 439 agacgaaatcatgacggtatctgaagaataagcatcggctaactctgtgccagcagccgc 498 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 558 Query: 241 ctttt 245 ||||| Sbjct: 559 ctttt 563
>gb|L37579.1|EUFRGD Euphorbia pulcherrima 16S ribosomal RNA (16S rRNA) gene Length = 1420 Score = 406 bits (205), Expect = e-110 Identities = 239/252 (94%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 332 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 333 ctgacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccgg 392 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||| || ||||||||| |||| ||| Sbjct: 393 agaagaagcaatgacggtatctggggaataagcatcgnntanctctgtgccagcagncgc 452 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 512 Query: 241 cttttcaagtcc 252 |||| |||||| Sbjct: 513 ntttttaagtcc 524
>gb|U03555.1|AIU03555 Alnus incana chloroplast 16S rRNA gene, complete sequence Length = 1842 Score = 406 bits (205), Expect = e-110 Identities = 242/253 (95%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 1 gacacggcccagac-tcctacgggaggcagcagtggggaattttccgcaatgggcgaaag 59 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 gacacggcccagacctcctacgggaggcagcagtggggaattttccgcaatgggcgaaag 530 Query: 60 cctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcg 119 | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || Sbjct: 531 ctggacggagcaatgccgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccg 590 Query: 120 gagaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccg 179 |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 591 gagaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccg 650 Query: 180 cggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 239 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 cggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtg 710 Query: 240 gcttttcaagtcc 252 |||||| |||||| Sbjct: 711 gctttttaagtcc 723
>emb|AJ440719.1|OIN440719 Putative agent of rhinosporidiosis partial 16S rRNA gene Length = 1458 Score = 406 bits (205), Expect = e-110 Identities = 242/253 (95%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 351 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||| ||| Sbjct: 352 ctgacggagcaatgccgcgtggaggtagaaggcccacgggccgtgaacttcttttcccgg 411 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 412 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 471 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtct-gtaggtg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 472 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctggtaggtg 531 Query: 240 gcttttcaagtcc 252 |||||| |||||| Sbjct: 532 gctttttaagtcc 544
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 404 bits (204), Expect = e-110 Identities = 240/252 (95%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 151183 gacacggcccagactcctacgggaggcagcagtggggaattttctgcaatgggcgaaagc 151124 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||| |||||||||||||||||||| ||||| | ||||||||| |||| |||||||| | Sbjct: 151123 ctgacagagcaatgccgcgtggaggtagaaggtccacgggtcgtaaactccttttctcag 151064 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 151063 ggaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 151004 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151003 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 150944 Query: 241 cttttcaagtcc 252 ||| | |||||| Sbjct: 150943 cttcttaagtcc 150932 Score = 404 bits (204), Expect = e-110 Identities = 240/252 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107279 gacacggcccagactcctacgggaggcagcagtggggaattttctgcaatgggcgaaagc 107338 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||| |||||||||||||||||||| ||||| | ||||||||| |||| |||||||| | Sbjct: 107339 ctgacagagcaatgccgcgtggaggtagaaggtccacgggtcgtaaactccttttctcag 107398 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107399 ggaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 107458 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107459 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 107518 Query: 241 cttttcaagtcc 252 ||| | |||||| Sbjct: 107519 cttcttaagtcc 107530
>gb|AF058678.1|AF058678 Takakia lepidozioides small subunit ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 1430 Score = 404 bits (204), Expect = e-110 Identities = 241/252 (95%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 330 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 388 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 389 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 448 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 449 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggttg 508 Query: 241 cttttcaagtcc 252 ||| | |||||| Sbjct: 509 cttcttaagtcc 520
>emb|AJ401354.1|CEU401354 Cuscuta europaea chloroplast 16S rRNA gene Length = 1894 Score = 404 bits (204), Expect = e-110 Identities = 241/252 (95%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 553 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||| Sbjct: 554 -tgacggagcaatgccgcgtggaggtagaaggcctacgggtcatgaacttcttttcccgg 612 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 613 agaagaataaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 672 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 732 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 733 ctttttaagtcc 744
>emb|AM159403.1| Uncultured bacterium 16S rRNA gene, clone RB45-20 Length = 993 Score = 402 bits (203), Expect = e-109 Identities = 246/255 (96%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 340 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 341 ctgacggagcaatgccgctgtgaggtggaaggcccacgggtcgtcaacttcttttctcgg 400 Query: 121 agaagaaacaatgacgg-tatctgaggaataagca-tcggctaac-tctgtgccggcagc 177 ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| ||||| Sbjct: 401 agaagaaacaatgacggttatctgaggaataagcattcggctaacttctgtgccagcagc 460 Query: 178 cgcggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtagg 237 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 cgc-gtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtagg 519 Query: 238 tggcttttcaagtcc 252 ||||||||||||||| Sbjct: 520 tggcttttcaagtcc 534
>emb|AM039620.1| Pinus taeda partial 16S rRNA gene, clone 67A Length = 566 Score = 402 bits (203), Expect = e-109 Identities = 230/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atacaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>emb|AM039617.1| Pinus taeda partial 16S rRNA gene, clone 55A Length = 566 Score = 402 bits (203), Expect = e-109 Identities = 230/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | |||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatggacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>emb|AM039615.1| Pinus taeda partial 16S rRNA gene, clone 45A Length = 566 Score = 402 bits (203), Expect = e-109 Identities = 230/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccgggatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>emb|AM039612.1| Pinus taeda partial 16S rRNA gene, clone 41A Length = 566 Score = 402 bits (203), Expect = e-109 Identities = 230/239 (96%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||| ||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttcacggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 400 bits (202), Expect = e-109 Identities = 239/250 (95%), Gaps = 1/250 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 320 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 321 ctgacggagcaatgccgcgtggaggtagagggcctacgggtcgtgaacttcttttccagg 380 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 381 agaagaagcaatgacggtatccggggaataagcatcggctaactctgtgccagcagccgc 440 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 441 ggtaagacagaggatgcaagcgtt-tccggaatgattgggcgtaaagcgtctgtaggtgg 499 Query: 241 cttttcaagt 250 ||||| |||| Sbjct: 500 ctttttaagt 509
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 398 bits (201), Expect = e-108 Identities = 235/245 (95%), Gaps = 1/245 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55890 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 55831 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| || Sbjct: 55830 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttaccga 55772 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 55771 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 55712 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55711 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 55652 Query: 241 ctttt 245 ||||| Sbjct: 55651 ctttt 55647 Score = 398 bits (201), Expect = e-108 Identities = 235/245 (95%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33938 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 33997 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| || Sbjct: 33998 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttaccga 34056 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 34057 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 34116 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34117 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 34176 Query: 241 ctttt 245 ||||| Sbjct: 34177 ctttt 34181
>emb|X58864.1|CARRN16S C.americana plastid 16S rRNA gene and spacer region Length = 1978 Score = 398 bits (201), Expect = e-108 Identities = 234/245 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 391 gacacggcccagactcctacgggaggcagcagtgggggattttccgcaatgggcgaaagc 450 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| |||||| |||||||||||||||||||| | | Sbjct: 451 ctgacggagcaatgccgcgtggaggtataaggcccacgggtcgtcaacttcttttacctg 510 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 | ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 511 ataagaaacaatgacggtatctggtgaataagcatcggctaactctgtgccagcagccgc 570 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 630 Query: 241 ctttt 245 ||||| Sbjct: 631 ctttt 635
>dbj|AK108725.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C09, full insert sequence Length = 1602 Score = 398 bits (201), Expect = e-108 Identities = 207/209 (99%) Strand = Plus / Plus Query: 44 ccgcaatgggcgaaagcctgacggagcaatgccgcgtggaggtggaaggcctacgggtcg 103 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1 ccgcaatgggcgaaagcctgacggagcaatgccgcgtggaggtggaaggcccacgggtcg 60 Query: 104 tcaacttcttttctcggagaagaaacaatgacggtatctgaggaataagcatcggctaac 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcaacttcttttctcggagaagaaacaatgacggtatctgaggaataagcatcggctaac 120 Query: 164 tctgtgccggcagccgcggtaagacagaggatgcaagcgttatccggaatgattgggcgt 223 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctgtgccagcagccgcggtaagacagaggatgcaagcgttatccggaatgattgggcgt 180 Query: 224 aaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||| Sbjct: 181 aaagcgtctgtaggtggcttttcaagtcc 209
>emb|AJ278626.1|CRE278626 Cuscuta reflexa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2191 Score = 398 bits (201), Expect = e-108 Identities = 241/253 (95%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 744 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 745 tggacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 804 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 805 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 864 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagc-gtctgtaggtg 239 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 865 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagctgtctgtaggtg 924 Query: 240 gcttttcaagtcc 252 |||||| |||||| Sbjct: 925 gctttttaagtcc 937
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 398 bits (201), Expect = e-108 Identities = 235/245 (95%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 925 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| || Sbjct: 926 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttaccga 984 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 985 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 1044 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1045 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 1104 Query: 241 ctttt 245 ||||| Sbjct: 1105 ctttt 1109
>gb|U24586.1|JVU24586 Juniperus virginiana chloroplast 16S rRNA gene, partial sequence Length = 1454 Score = 396 bits (200), Expect = e-107 Identities = 239/252 (94%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 290 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagc 349 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| |||||| ||||||||| ||||||||||||||| Sbjct: 350 ctgacggagcaatgccgcgtgaaggaagaaggctcacgggtcgtaaacttcttttctcgg 409 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 410 agaagaataaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 469 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 470 ggtaaaacagaggatgcaagcgttatccggaattattgggcgtaaagtgtctgtaggtgg 529 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 530 cttttcaagtcc 541
>gb|U24584.1|ETU24584 Ephedra trifurca chloroplast 16S rRNA gene, partial sequence Length = 1428 Score = 396 bits (200), Expect = e-107 Identities = 239/252 (94%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 320 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||||| Sbjct: 321 ctgacggagcaatgccgcgtgaaggcagaaggcctacgggttgtgaacttcttttctcgg 380 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 381 agaagaagcaatgacggtatctgaggaataagcatcggccaactctgtgccagcagccgc 440 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| ||||||||||||||||||||||||| | ||||||||||||| |||| ||||||| Sbjct: 441 ggtaatacagaggatgcaagcgttatccggatttattgggcgtaaagtgtctttaggtgg 500 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 501 cttttcaagtcc 512
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 394 bits (199), Expect = e-107 Identities = 238/251 (94%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 93381 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgcaagc 93440 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||| | Sbjct: 93441 ctgacggagcaatgccgcgtggaggaagaaggctcacgggtcgtaaactccttttctcag 93500 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93501 agaagaagacatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 93560 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93561 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 93620 Query: 241 cttttcaagtc 251 ||||| ||||| Sbjct: 93621 ctttttaagtc 93631
>gb|DQ004281.1| Uncultured cyanobacterium clone AEN12 16S ribosomal RNA gene, partial sequence Length = 572 Score = 394 bits (199), Expect = e-107 Identities = 226/235 (96%) Strand = Plus / Plus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 73 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 74 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 133 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 134 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 193 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 194 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 248
>gb|AF393578.1| Bazzania trilobata small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1464 Score = 394 bits (199), Expect = e-107 Identities = 238/251 (94%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 270 gacacggcccagactcttacgggaggcagcagtggggaattttccgcaatgggcgagagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| |||||| ||| ||||| |||| |||||||| | Sbjct: 330 ctgacggagcaatgccgcgtggaggtagaaggctcacgagtcgtaaactccttttctcag 389 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 390 agaagatgcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 449 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 509 Query: 241 cttttcaagtc 251 ||||| ||||| Sbjct: 510 ctttttaagtc 520
>gb|AY956672.1| Uncultured cyanobacterium clone CW20 16S ribosomal RNA gene, partial sequence Length = 565 Score = 394 bits (199), Expect = e-107 Identities = 226/235 (96%) Strand = Plus / Minus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 502 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 501 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 442 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 441 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 382 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 381 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 327
>gb|AY956671.1| Uncultured cyanobacterium clone CW2 16S ribosomal RNA gene, partial sequence Length = 565 Score = 394 bits (199), Expect = e-107 Identities = 226/235 (96%) Strand = Plus / Minus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 499 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 498 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 439 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 438 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 379 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 378 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 324
>gb|AY956662.1| Uncultured cyanobacterium clone CW12 16S ribosomal RNA gene, partial sequence Length = 565 Score = 394 bits (199), Expect = e-107 Identities = 226/235 (96%) Strand = Plus / Minus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 499 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 498 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 439 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 438 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 379 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 378 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 324
>gb|AY956640.1| Uncultured cyanobacterium clone CC9 16S ribosomal RNA gene, partial sequence Length = 566 Score = 394 bits (199), Expect = e-107 Identities = 226/235 (96%) Strand = Plus / Minus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 499 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 498 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 439 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 438 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 379 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 378 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 324
>gb|AY956639.1| Uncultured cyanobacterium clone CC8 16S ribosomal RNA gene, partial sequence Length = 566 Score = 394 bits (199), Expect = e-107 Identities = 226/235 (96%) Strand = Plus / Minus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 499 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 498 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 439 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 438 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 379 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 378 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 324
>gb|AY956638.1| Uncultured cyanobacterium clone CC7 16S ribosomal RNA gene, partial sequence Length = 567 Score = 394 bits (199), Expect = e-107 Identities = 226/235 (96%) Strand = Plus / Minus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 499 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 498 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 439 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 438 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 379 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 378 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 324
>gb|AY956625.1| Uncultured cyanobacterium clone CC10 16S ribosomal RNA gene, partial sequence Length = 566 Score = 394 bits (199), Expect = e-107 Identities = 226/235 (96%) Strand = Plus / Minus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 501 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 500 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 441 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 440 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 381 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 380 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 326
>emb|AM039621.1| Pinus taeda partial 16S rRNA gene, clone 73A Length = 566 Score = 394 bits (199), Expect = e-107 Identities = 229/239 (95%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| | ||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccatgggtcatgaacttcttttctcggagaagaaaaaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcatctgtaggtggcttttcaagtcc 239
>emb|AM039618.1| Pinus taeda partial 16S rRNA gene, clone 61S Length = 566 Score = 394 bits (199), Expect = e-107 Identities = 229/239 (95%) Strand = Plus / Plus Query: 14 ctcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaat 73 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 1 ctcctacgggaggcagcagtggggaattttccacaatgggcaaaagcctgacggagcaat 60 Query: 74 gccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatg 133 |||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| |||| Sbjct: 61 gccgcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaagaatg 120 Query: 134 acggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagg 193 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 acggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagg 180 Query: 194 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 239
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 392 bits (198), Expect = e-106 Identities = 231/242 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 140251 gacacggcccagactcctacgggaggcagcagtggggaatcttccgcaatgggcgaaagc 140310 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 140311 ctgacggagcaatgccgcgtggaggcagaaggcccacgggtcgtaaactccttttctcag 140370 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 140371 agaagaagcagtgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 140430 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140431 ggtaagacaggggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 140490 Query: 241 ct 242 || Sbjct: 140491 ct 140492 Score = 392 bits (198), Expect = e-106 Identities = 231/242 (95%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 92600 gacacggcccagactcctacgggaggcagcagtggggaatcttccgcaatgggcgaaagc 92541 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 92540 ctgacggagcaatgccgcgtggaggcagaaggcccacgggtcgtaaactccttttctcag 92481 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 92480 agaagaagcagtgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 92421 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92420 ggtaagacaggggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 92361 Query: 241 ct 242 || Sbjct: 92360 ct 92359
>gb|AF244549.1|AF244549 Adiantum pedatum 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1484 Score = 392 bits (198), Expect = e-106 Identities = 232/242 (95%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 356 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| | Sbjct: 357 -tgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtaaactccttttctcag 415 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 416 agaagaagcagtgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 475 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ggtaagacaggggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 535 Query: 241 ct 242 || Sbjct: 536 ct 537
>gb|AY171306.1| Uncultured bacterium clone s41 16S ribosomal RNA gene, partial sequence Length = 1050 Score = 392 bits (198), Expect = e-106 Identities = 228/238 (95%) Strand = Plus / Plus Query: 15 tcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatg 74 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 tcctacggggggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatg 64 Query: 75 ccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatga 134 |||||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||| Sbjct: 65 ccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatga 124 Query: 135 cggtatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagagga 194 ||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 125 cggtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagagga 184 Query: 195 tgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 185 tgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 242
>gb|U24583.1|DMU24583 Doodia maxima chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 392 bits (198), Expect = e-106 Identities = 231/242 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 270 gacacggcccagactcctacgggaggcagcagtggggaatcttccgcaatgggcgaaagc 329 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||| Sbjct: 330 ctgacggagcaatgccgcgtggaggcagaaggcccacgggtcgtaaactccttttctcgg 389 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 390 agaagaagcagtgacggtatccgaggaataagcatcggctaactctgtgccagcagccgc 449 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ggtaagacaggggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 509 Query: 241 ct 242 || Sbjct: 510 ct 511
>emb|Z81323.1|PAA16SRRN P.aquilinum chloroplast 16S rRNA gene Length = 1372 Score = 392 bits (198), Expect = e-106 Identities = 232/242 (95%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 gacacggcccagactcctacgggaggcagcagtggggaatcttccgcaatgggcgaaagc 306 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||| Sbjct: 307 -tgacggagcaatgccgcgtggaggcagaaggcccacgggtcgtaaactccttttctcgg 365 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 366 agaagaagcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 425 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 ggtaagacaggggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 485 Query: 241 ct 242 || Sbjct: 486 ct 487
>gb|DQ160078.1| Taraxacum officinale To61-12 mRNA, partial sequence Length = 350 Score = 391 bits (197), Expect = e-106 Identities = 230/241 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 163 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 || ||||||||||||||||||||||| ||||||| ||||||| | ||||||||||| | | Sbjct: 164 ctaacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttcccag 223 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 224 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 283 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 343 Query: 241 c 241 | Sbjct: 344 c 344
>emb|AJ401355.1|CPL401355 Cuscuta platyloba chloroplast 16S rRNA gene Length = 1998 Score = 391 bits (197), Expect = e-106 Identities = 236/249 (94%) Strand = Plus / Plus Query: 4 acggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctg 63 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 549 acggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagctgg 608 Query: 64 acggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggaga 123 ||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||| Sbjct: 609 acggagcaatgccgcgtggaggtagaaggcctacgggtcataaacttcttttcccggaga 668 Query: 124 agaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgcggt 183 ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 669 cgaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgcggt 728 Query: 184 aagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctt 243 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 aatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctt 788 Query: 244 ttcaagtcc 252 || |||||| Sbjct: 789 tttaagtcc 797
>emb|AJ409116.1|RSE409116 Putative agent of rhinosporidiosis partial 16S rRNA gene Length = 608 Score = 391 bits (197), Expect = e-106 Identities = 239/252 (94%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 181 gacacggcccagactcctacgggaggcact--tggggaattttccgcaatgggcgaaagc 238 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 239 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgtgaacttcttttcccgg 298 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 299 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 358 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 418 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 419 ctttttaagtcc 430
>gb|AF445656.1| Uncultured eukaryote clone SM1B08 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 1475 Score = 389 bits (196), Expect = e-105 Identities = 238/252 (94%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 317 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagc 376 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| |||||| ||||||||| ||||||||||||||| Sbjct: 377 ctgacggagcaatgccgcgtgaagggagaaggctcacgggtcgtaaacttcttttctcgg 436 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 437 agaagaataaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 496 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 497 ggtaaaacagaggatgcaagcgttatgcggaattattgggcgtaaagtgtctgtaggtgg 556 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 557 cttttcaagtcc 568
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 389 bits (196), Expect = e-105 Identities = 239/252 (94%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119707 gacacggcccagactcttacgggaggcagcagtggggaattttccgcaatgggcgaaa-c 119649 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||| | Sbjct: 119648 gtgacggagcaatgccgcgtggaggtagaaggctcacgggtcgtaaactccttttctcag 119589 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119588 agaagatgcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 119529 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119528 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 119469 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 119468 ctttttaagtcc 119457 Score = 389 bits (196), Expect = e-105 Identities = 239/252 (94%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 82413 gacacggcccagactcttacgggaggcagcagtggggaattttccgcaatgggcgaaa-c 82471 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||| | Sbjct: 82472 gtgacggagcaatgccgcgtggaggtagaaggctcacgggtcgtaaactccttttctcag 82531 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 82532 agaagatgcaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 82591 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82592 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 82651 Query: 241 cttttcaagtcc 252 ||||| |||||| Sbjct: 82652 ctttttaagtcc 82663
>gb|AF244556.1|AF244556 Huperzia lucidula 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1458 Score = 389 bits (196), Expect = e-105 Identities = 239/252 (94%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 274 gacacggcccagactcctacgggaggcagcagtggggaattttctgcaatgggcgaaagc 333 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||| |||||||||||||||||||| ||||| | ||||||||| |||| ||||||||| Sbjct: 334 -tgacagagcaatgccgcgtggaggtagaaggtccacgggtcgtaaactccttttctcga 392 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 393 ggaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 452 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 512 Query: 241 cttttcaagtcc 252 ||| | |||||| Sbjct: 513 cttcttaagtcc 524
>gb|AF244555.1|AF244555 Gnetum leyboldii 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1448 Score = 389 bits (196), Expect = e-105 Identities = 239/252 (94%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 351 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| Sbjct: 352 -tgacggagcaatgccgcgtgaaggcagaaggcctacgggtcgtgaacttcttttctcgg 410 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 411 agaagaaccaatgacggtatctgaggaataagcatcggccaactctgtgccagcagccgc 470 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| ||||||||||||||||||||||||| | ||||||||||||| |||| ||||||| Sbjct: 471 ggtaatacagaggatgcaagcgttatccggatttattgggcgtaaagtgtctttaggtgg 530 Query: 241 cttttcaagtcc 252 |||||||||||| Sbjct: 531 cttttcaagtcc 542
>gb|AF393607.1| Pellia neesiana small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 389 bits (196), Expect = e-105 Identities = 238/252 (94%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gacacggcccagactcttacgggaggcagcagtggggaattttccgcaatgggcgaaagc 333 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||| | Sbjct: 334 ctgacggagcaatgccgcgtggaggtagaaggctcacgggtcgtaaactccttttctcag 393 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 | |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 394 aaaagatgtaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 453 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 513 Query: 241 cttttcaagtcc 252 || || |||||| Sbjct: 514 ctctttaagtcc 525
>gb|AY043966.1| Uncultured embryophyte plastid clone NOS7.166WL 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 503 Score = 387 bits (195), Expect = e-104 Identities = 225/235 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 269 gacacggcccagactcctacgggaggcagcagtacggaattttccgcaatgggcgaaagc 328 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||| ||| Sbjct: 329 ctgacggagcaatgccgcgtggaggtagaaggcccacgggtcatgaacttcttttcccgg 388 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 389 agaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgc 448 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgta 235 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgta 503
>gb|AY553213.1| Auxenochlorella protothecoides 16S small subunit ribosomal RNA gene, partial sequence; chloroplast Length = 1475 Score = 387 bits (195), Expect = e-104 Identities = 231/243 (95%) Strand = Plus / Minus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 1170 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgacagc 1111 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||||| |||| || ||||||||||||| | Sbjct: 1110 ctgacggagcaatgccgcgtgaaggatgaaggcctatgggttgtaaacttcttttctcag 1051 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1050 agaagaagcattgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 991 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 931 Query: 241 ctt 243 ||| Sbjct: 930 ctt 928
>emb|X16579.1|CHCVSSRN Chlorella vulgaris chloroplast DNA for small subunit ribosomal RNA Length = 1494 Score = 387 bits (195), Expect = e-104 Identities = 231/243 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 313 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgacagc 372 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||||| |||| || ||||||||||||| | Sbjct: 373 ctgacggagcaatgccgcgtgaaggatgaaggcctatgggttgtaaacttcttttctcag 432 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 433 agaagaagcattgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 492 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 552 Query: 241 ctt 243 ||| Sbjct: 553 ctt 555
>gb|AF350259.1|AF350259 Chlorella vulgaris 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 578 Score = 387 bits (195), Expect = e-104 Identities = 231/243 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 172 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgacagc 231 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||||| |||| || ||||||||||||| | Sbjct: 232 ctgacggagcaatgccgcgtgaaggatgaaggcctatgggttgtaaacttcttttctcag 291 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 292 agaagaagcattgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 351 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 411 Query: 241 ctt 243 ||| Sbjct: 412 ctt 414
>gb|DQ004295.1| Uncultured cyanobacterium clone BEN12 16S ribosomal RNA gene, partial sequence Length = 564 Score = 387 bits (195), Expect = e-104 Identities = 225/235 (95%) Strand = Plus / Plus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaacgccg 64 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 65 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 124 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 125 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 184 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 185 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 239
>gb|DQ004280.1| Uncultured cyanobacterium clone AEN1 16S ribosomal RNA gene, partial sequence Length = 581 Score = 387 bits (195), Expect = e-104 Identities = 225/235 (95%) Strand = Plus / Plus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 86 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| || |||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 87 cgtggaggtagagggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 146 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 147 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 206 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 207 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 261
>gb|AF393602.1| Mesotaenium caldariorum small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1461 Score = 387 bits (195), Expect = e-104 Identities = 237/251 (94%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 273 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgcaagc 332 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 |||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||| | Sbjct: 333 ctgacggagcaatgccgcgtggaggtagaaggctcacgggtcgtaaactccttttctcag 392 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 393 agaagaatacatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 452 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 453 ggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggttg 512 Query: 241 cttttcaagtc 251 ||||| ||||| Sbjct: 513 ctttttaagtc 523
>gb|AY956626.1| Uncultured cyanobacterium clone CC12 16S ribosomal RNA gene, partial sequence Length = 566 Score = 387 bits (195), Expect = e-104 Identities = 225/235 (95%) Strand = Plus / Minus Query: 18 tacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccg 77 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 563 tacgggaggcagcagtggggaattttccgcaatgggcggaagcctgacggagcaatgccg 504 Query: 78 cgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacgg 137 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 503 cgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacgg 444 Query: 138 tatctgaggaataagcatcggctaactctgtgccggcagccgcggtaagacagaggatgc 197 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 443 tatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgc 384 Query: 198 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggcttttcaagtcc 252 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 383 aagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttttaagtcc 329
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 387 bits (195), Expect = e-104 Identities = 231/243 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 22610 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgacagc 22669 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||||| |||| || ||||||||||||| | Sbjct: 22670 ctgacggagcaatgccgcgtgaaggatgaaggcctatgggttgtaaacttcttttctcag 22729 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 22730 agaagaagcattgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 22789 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22790 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 22849 Query: 241 ctt 243 ||| Sbjct: 22850 ctt 22852 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 4 acggcccagactcctacgggaggcagcagtggggaa 39 |||||||||||||||||| |||||||||||| |||| Sbjct: 32911 acggcccagactcctacgagaggcagcagtgaggaa 32876
>emb|AJ242754.1|CVU242754 Chlorella vulgaris chloroplast 16S rRNA gene, partial, strain NIES 227 Length = 479 Score = 387 bits (195), Expect = e-104 Identities = 231/243 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 91 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgacagc 150 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||||| |||| || ||||||||||||| | Sbjct: 151 ctgacggagcaatgccgcgtgaaggatgaaggcctatgggttgtaaacttcttttctcag 210 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 211 agaagaagcattgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 270 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 330 Query: 241 ctt 243 ||| Sbjct: 331 ctt 333
>emb|AJ242753.1|CVU242753 Chlorella vulgaris chloroplast 16S rRNA gene, partial, strain IAM C-27 Length = 475 Score = 387 bits (195), Expect = e-104 Identities = 231/243 (95%) Strand = Plus / Plus Query: 1 gacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 91 gacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgacagc 150 Query: 61 ctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcgg 120 ||||||||||||||||||||| ||| ||||||||| |||| || ||||||||||||| | Sbjct: 151 ctgacggagcaatgccgcgtgaaggatgaaggcctatgggttgtaaacttcttttctcag 210 Query: 121 agaagaaacaatgacggtatctgaggaataagcatcggctaactctgtgccggcagccgc 180 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 211 agaagaagcattgacggtatctgaggaataagcatcggctaactctgtgccagcagccgc 270 Query: 181 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 ggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtgg 330 Query: 241 ctt 243 ||| Sbjct: 331 ctt 333 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,008,526 Number of Sequences: 3902068 Number of extensions: 2008526 Number of successful extensions: 457970 Number of sequences better than 10.0: 208179 Number of HSP's better than 10.0 without gapping: 207698 Number of HSP's successfully gapped in prelim test: 517 Number of HSP's that attempted gapping in prelim test: 59498 Number of HSP's gapped (non-prelim): 377174 length of query: 252 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 230 effective length of database: 17,147,199,772 effective search space: 3943855947560 effective search space used: 3943855947560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
