| Clone Name | baet50d07 |
|---|---|
| Clone Library Name | barley_pub |
>DUS8_MOUSE (O09112) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC| 3.1.3.16) (Neuronal tyrosine threonine phosphatase 1) Length = 663 Score = 32.0 bits (71), Expect = 0.45 Identities = 19/66 (28%), Positives = 27/66 (40%) Frame = -3 Query: 205 PPPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDSIAATTCELWRSTESA 26 P P P G+PLP S G E+ + AR S D+ +T + + Sbjct: 316 PEPLMGPAAGIPLPRLPPSTSESAATGSEAATAAREGSPSAGGDAPIPSTAPATSALQQG 375 Query: 25 LRGVLL 8 LRG+ L Sbjct: 376 LRGLHL 381
>DPOD3_HUMAN (Q15054) DNA polymerase delta subunit 3 (DNA polymerase delta| subunit p66) Length = 466 Score = 30.8 bits (68), Expect = 0.99 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = -3 Query: 205 PPPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDSIAATTCELWRSTES 29 PPP PL+ VP PE S++ GE R ++T++D E +ES Sbjct: 352 PPPPSPPLEPVPKTEPEPPSVKSSS-GENKRKRKRVLKSKTYLDGEGCIVTEKVYESES 409
>SYI_THIDA (Q3SHS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 929 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -3 Query: 220 GEMLMPPPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAET 83 G ++ G L+G+PL HP Q VGE T+ A T + T Sbjct: 287 GAEILAHTTGQMLEGLPLWHPFQDRQVPVIVGEHVTADAGTGAVHT 332
>LSD1_MOUSE (Q6ZQ88) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (AOF2 protein) (BRAF35-HDAC complex protein BHC110) Length = 853 Score = 29.6 bits (65), Expect = 2.2 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -3 Query: 202 PPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAET 83 PP P G+ P AG QA T G S + T AET Sbjct: 66 PPRASPPGGLAEPPGSAGPQAGPTAGPGSATPMETGIAET 105
>PDC2_CANAL (O60035) Protein PDC2| Length = 836 Score = 28.1 bits (61), Expect = 6.4 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = -3 Query: 205 PPPEGVPLDGVPLPHPEAGEQASTTVGEESTSMART-----SSAETFVDSIAATTCELWR 41 PPP VP+ VP+P P Q T + S +R S+A VD A T L Sbjct: 748 PPPPPVPVP-VPVPVPSVPSQVPATSFPQDVSSSRAVRAPMSTAAVDVDMATAITKLLEY 806 Query: 40 STESALR 20 S + L+ Sbjct: 807 SASNTLK 813
>NHS_HUMAN (Q6T4R5) Nance-Horan syndrome protein (Congenital cataracts and| dental anomalies protein) Length = 1630 Score = 27.7 bits (60), Expect = 8.4 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = -3 Query: 205 PPPEGVPLDGVPLPHPE---AGEQASTTVGEESTSMARTSSA 89 PPP P D PH E AGE+++ + E + + SSA Sbjct: 71 PPPLPAPADQTQPPHGEASVAGEESTAGIPEAAPAAGEASSA 112
>FAS_RAT (P12785) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-ca Length = 2505 Score = 27.7 bits (60), Expect = 8.4 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Frame = -3 Query: 166 PHPEAGEQASTTVGEES--TSMARTSSAETFVDSIAATTC---ELWRSTESAL 23 P P + ST++ E +S+ARTSSAE V+++ + LW E A+ Sbjct: 705 PRPRSARWLSTSIPEAQWQSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAV 757
>SF3B2_HUMAN (Q13435) Splicing factor 3B subunit 2 (Spliceosome-associated| protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit) Length = 872 Score = 27.7 bits (60), Expect = 8.4 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = -3 Query: 220 GEMLMPPPEGVPLDGVPLPHPEAG 149 G+ PPP L G+P+P P G Sbjct: 52 GDKAAPPPMSAQLPGIPMPPPPLG 75
>LSD1_HUMAN (O60341) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (BRAF35-HDAC complex protein BHC110) Length = 852 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -3 Query: 202 PPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAET 83 PP P G+ P AG QA TV S + T AET Sbjct: 65 PPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAET 104
>FRIZ2_DROME (Q9VVX3) Protein frizzled-2 precursor (dFz2)| Length = 694 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -3 Query: 172 PLPHPEAGEQASTTVGEESTSMARTSSAETFVDSIAATT 56 P+PHP AG VG + S+ T + S+A+T+ Sbjct: 639 PIPHPYAGSGMGMPVGSAAGSLLATPYTQAGGASVASTS 677
>FAS_MOUSE (P19096) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2504 Score = 27.7 bits (60), Expect = 8.4 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Frame = -3 Query: 166 PHPEAGEQASTTVGEES--TSMARTSSAETFVDSIAATTC---ELWRSTESAL 23 P P + ST++ E +S+ARTSSAE V+++ + LW E A+ Sbjct: 705 PRPRSARWLSTSIPEAQWQSSLARTSSAEYNVNNLVSPVLFQEALWHIPEHAV 757
>SYL_ERWCT (Q6D7L6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 860 Score = 27.7 bits (60), Expect = 8.4 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -3 Query: 199 PEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDS 71 PE V +DG+ P E A TTV + ++ T + +TF++S Sbjct: 455 PEDVVMDGITSPLKSNPEWAKTTVNGQ-PALRETDTFDTFMES 496
>ANK3_HUMAN (Q12955) Ankyrin-3 (ANK-3) (Ankyrin-G)| Length = 4377 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 184 LDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVD 74 + G P P PE E++ +STS+ +T+ ET V+ Sbjct: 3193 IPGKPSPIPEVSEESEEEEQAKSTSLKQTTVEETAVE 3229
>SYL_HAEDU (Q7VM66) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 861 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -3 Query: 199 PEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDS 71 PE V +DGV P E A TT E ++ T + +TF++S Sbjct: 455 PENVVMDGVQSPIKSDPEWAKTTY-EGQPALKETDTFDTFMES 496 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,493,937 Number of Sequences: 219361 Number of extensions: 316618 Number of successful extensions: 1891 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1761 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1885 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)