ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet50b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y114_CHLMU (Q9PLI5) Hypothetical protein TC0114 28 5.0
2UCRQ_YEAST (P08525) Ubiquinol-cytochrome c reductase complex ubi... 28 8.6

>Y114_CHLMU (Q9PLI5) Hypothetical protein TC0114|
          Length = 122

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 70  LVGEQSNTW*ILLHNDRKSRHR 5
           L+GEQ N W +L   D  SRHR
Sbjct: 64  LIGEQPNPWDLLQPQDAMSRHR 85



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>UCRQ_YEAST (P08525) Ubiquinol-cytochrome c reductase complex|
           ubiquinone-binding protein QP-C (EC 1.10.2.2)
           (Ubiquinol-cytochrome c reductase complex 11 kDa
           protein) (Complex III subunit VIII)
          Length = 94

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 72  YWWVNNPTLGEFCFTMIGRADIE 4
           YWW N     EF ++  GR ++E
Sbjct: 68  YWWKNGNEYNEFLYSKAGREELE 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.475 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,437,661
Number of Sequences: 219361
Number of extensions: 304793
Number of successful extensions: 877
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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