| Clone Name | baet50a09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SRS1_ORYSA (P83649) Salt-stress root protein RS1 | 109 | 3e-24 | 2 | MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A | 29 | 4.9 | 3 | Y2543_HALSA (Q9HMH2) Protein Vng2543c | 28 | 8.3 |
|---|
>SRS1_ORYSA (P83649) Salt-stress root protein RS1| Length = 204 Score = 109 bits (272), Expect = 3e-24 Identities = 62/116 (53%), Positives = 67/116 (57%), Gaps = 1/116 (0%) Frame = +3 Query: 60 MTSVWKTKVLPGLSXXXXXXXXXXXXXEFLKSFNXXXXXXXXXXXXTELEPKVVETIEAS 239 MTSVWKTKVL GL+ EFLKSFN TELEPKVVE +E+S Sbjct: 1 MTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFNKEEIGKEIDDKKTELEPKVVEVVESS 60 Query: 240 PPE-XXXXXXXXXXXXXXXNSAAVIKFLDEMAKIGFPGAKLVSDAVVKSGTTPLSP 404 PPE N AV KFL+E+AKI FPGAK VSDAV KSGTTPLSP Sbjct: 61 PPEIKALLKDKKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSP 116
>MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A| Length = 329 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 47 EGEEYDERMEDQGSPRAQQVLRQGWQEGRRRR 142 EG E R G QQ+L+QGWQ+ +R R Sbjct: 198 EGGELFRRHHVSGEVIRQQLLQQGWQQQQRAR 229
>Y2543_HALSA (Q9HMH2) Protein Vng2543c| Length = 210 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -1 Query: 410 RWRGEGRGAGLDHRVAHQLGSGETNLGHLVKE 315 R RG RG H H+LG+ + LGH + E Sbjct: 58 RGRGRLRGCAGAHGSIHELGNHDQQLGHAIVE 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,006,066 Number of Sequences: 219361 Number of extensions: 669634 Number of successful extensions: 2141 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2140 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)