| Clone Name | baet49g06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF532989.1| Mus musculus phosphoinositide 3 kinase P110delta (Pik3cd) gene, complete cds Length = 21152 Score = 38.2 bits (19), Expect = 1.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 ctactcacaacaatgttct 37 ||||||||||||||||||| Sbjct: 8028 ctactcacaacaatgttct 8010
>gb|U18472.1|PCU18472 Primate calicivirus 2C-RNA helicase protein gene, partial cds Length = 301 Score = 38.2 bits (19), Expect = 1.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tcacaacaatgttctacta 41 ||||||||||||||||||| Sbjct: 259 tcacaacaatgttctacta 277
>gb|AC161050.2| Mus musculus BAC clone RP23-477C12 from chromosome 12, complete sequence Length = 197084 Score = 36.2 bits (18), Expect = 7.5 Identities = 21/22 (95%) Strand = Plus / Minus Query: 30 aatgttctactatgtcattctc 51 ||||||||||| |||||||||| Sbjct: 171455 aatgttctactctgtcattctc 171434
>gb|AC159545.18| Mus musculus 6 BAC RP23-244E8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 172372 Score = 36.2 bits (18), Expect = 7.5 Identities = 21/22 (95%) Strand = Plus / Minus Query: 4 tcatctccccatgcactactca 25 ||||||||| |||||||||||| Sbjct: 82715 tcatctccctatgcactactca 82694
>gb|AC098706.3| Mus musculus BAC clone RP23-1I11 from 14, complete sequence Length = 234326 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 aacaatgttctactatgt 44 |||||||||||||||||| Sbjct: 44563 aacaatgttctactatgt 44580
>emb|CR382289.17| Zebrafish DNA sequence from clone DKEY-161J10 in linkage group 10, complete sequence Length = 187296 Score = 36.2 bits (18), Expect = 7.5 Identities = 21/22 (95%) Strand = Plus / Minus Query: 18 actactcacaacaatgttctac 39 |||||||||| ||||||||||| Sbjct: 179706 actactcacatcaatgttctac 179685
>emb|CR855335.5| Zebrafish DNA sequence from clone CH211-171A1 in linkage group 18, complete sequence Length = 51125 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 27 aacaatgttctactatgt 44 |||||||||||||||||| Sbjct: 34312 aacaatgttctactatgt 34295
>gb|AC016588.9| Homo sapiens chromosome 19 clone CTD-3113P16, complete sequence Length = 144578 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccccatgcactactcaca 27 |||||||||||||||||| Sbjct: 116386 ccccatgcactactcaca 116369
>emb|BX323875.15| Zebrafish DNA sequence from clone CH211-135L21 in linkage group 17, complete sequence Length = 173617 Score = 36.2 bits (18), Expect = 7.5 Identities = 21/22 (95%) Strand = Plus / Minus Query: 27 aacaatgttctactatgtcatt 48 |||||||||||||| ||||||| Sbjct: 62749 aacaatgttctactttgtcatt 62728
>gb|AC159622.2| Mus musculus BAC clone RP24-289D12 from chromosome 12, complete sequence Length = 174662 Score = 36.2 bits (18), Expect = 7.5 Identities = 21/22 (95%) Strand = Plus / Plus Query: 30 aatgttctactatgtcattctc 51 ||||||||||| |||||||||| Sbjct: 108296 aatgttctactctgtcattctc 108317
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 tcatctccccatgcacta 21 |||||||||||||||||| Sbjct: 6861146 tcatctccccatgcacta 6861163
>gb|AC006091.10|AC006091 Drosophila melanogaster, chromosome 3R, region 91F1-91F13, BAC clone BACR48G05, complete sequence Length = 174118 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 acaacaatgttctactat 42 |||||||||||||||||| Sbjct: 157483 acaacaatgttctactat 157466
>gb|AC008141.3|AC008141 Drosophila melanogaster, chromosome 3R, region 91F-91F, BAC clone BACR17F04, complete sequence Length = 133863 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 acaacaatgttctactat 42 |||||||||||||||||| Sbjct: 79006 acaacaatgttctactat 78989
>emb|BX000697.7| Zebrafish DNA sequence from clone CH211-120M13 in linkage group 18, complete sequence Length = 186826 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 27 aacaatgttctactatgt 44 |||||||||||||||||| Sbjct: 34202 aacaatgttctactatgt 34185
>gb|AE003725.2| Drosophila melanogaster chromosome 3R, section 63 of 118 of the complete sequence Length = 253323 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 acaacaatgttctactat 42 |||||||||||||||||| Sbjct: 115125 acaacaatgttctactat 115108
>emb|CT573047.6| Mouse DNA sequence from clone RP23-73L5 on chromosome 14, complete sequence Length = 211944 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 aacaatgttctactatgt 44 |||||||||||||||||| Sbjct: 189631 aacaatgttctactatgt 189648
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 tcatctccccatgcacta 21 |||||||||||||||||| Sbjct: 6861025 tcatctccccatgcacta 6861042
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144563 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 tcatctccccatgcacta 21 |||||||||||||||||| Sbjct: 100892 tcatctccccatgcacta 100875
>gb|AC153381.2| Mus musculus 6 BAC RP23-397L23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196902 Score = 36.2 bits (18), Expect = 7.5 Identities = 21/22 (95%) Strand = Plus / Plus Query: 4 tcatctccccatgcactactca 25 ||||||||| |||||||||||| Sbjct: 38382 tcatctccctatgcactactca 38403 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 317,399 Number of Sequences: 3902068 Number of extensions: 317399 Number of successful extensions: 80246 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80183 Number of HSP's gapped (non-prelim): 63 length of query: 54 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 34 effective length of database: 17,155,003,908 effective search space: 583270132872 effective search space used: 583270132872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)