ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet49f07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193877.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 127 bits (64), Expect = 2e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 135 ccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccg 194 |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 115 ccgtcgccgtgggcgctccctgtcatcggccacctccaccacgtcgcgggcgcgctcccg 174 Query: 195 caccgcgcgatgcgggacct 214 |||||||||||||| ||||| Sbjct: 175 caccgcgcgatgcgcgacct 194
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 2e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 135 ccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccg 194 |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 15565490 ccgtcgccgtgggcgctccctgtcatcggccacctccaccacgtcgcgggcgcgctcccg 15565431 Query: 195 caccgcgcgatgcgggacct 214 |||||||||||||| ||||| Sbjct: 15565430 caccgcgcgatgcgcgacct 15565411
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 127 bits (64), Expect = 2e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 135 ccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccg 194 |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 122999 ccgtcgccgtgggcgctccctgtcatcggccacctccaccacgtcgcgggcgcgctcccg 122940 Query: 195 caccgcgcgatgcgggacct 214 |||||||||||||| ||||| Sbjct: 122939 caccgcgcgatgcgcgacct 122920
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 127 bits (64), Expect = 2e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 135 ccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccg 194 |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 3387 ccgtcgccgtgggcgctccctgtcatcggccacctccaccacgtcgcgggcgcgctcccg 3328 Query: 195 caccgcgcgatgcgggacct 214 |||||||||||||| ||||| Sbjct: 3327 caccgcgcgatgcgcgacct 3308
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 83.8 bits (42), Expect = 2e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 135 ccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccg 194 |||||||||||||| ||||| || |||||||||||||||||| | || || ||||||||| Sbjct: 25753491 ccgtcgccatgggcactcccggtgatcggccacctccaccacctagccggggcgctcccg 25753550 Query: 195 caccgcgcgatgcg 208 |||||||| ||||| Sbjct: 25753551 caccgcgccatgcg 25753564 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 132 ccgccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctc 191 ||||||||||| ||||||||||| || |||| |||||||||||| | || ||||||||| Sbjct: 25762280 ccgccgtcgccgtgggcgctcccggtggtcggtcacctccaccacctggcgggcgcgctc 25762339 Query: 192 ccgcaccgcgcgatgcg 208 | ||||||||| ||||| Sbjct: 25762340 cagcaccgcgccatgcg 25762356 Score = 63.9 bits (32), Expect = 2e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 132 ccgccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctc 191 ||||||||||| |||| ||| || || ||||| ||||| |||||| | || ||||||||| Sbjct: 25723443 ccgccgtcgccgtgggggctgccggtgatcgggcacctgcaccacctggcgggcgcgctc 25723384 Query: 192 ccgcaccgcgcgatgcgggacctg 215 ||||||| ||| ||||| |||||| Sbjct: 25723383 ccgcaccacgccatgcgcgacctg 25723360 Score = 56.0 bits (28), Expect = 5e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgcgatgcgggacctg 215 ||||||||| ||| |||||| |||| ||| ||||||||||||||||||||| |||||| Sbjct: 25698886 gtcatcggcagcctgcaccacctcgccggcaagctcccgcaccgcgcgatgcgcgacctg 25698945 Score = 56.0 bits (28), Expect = 5e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgcgatgcgggacctg 215 ||||||||| ||| |||||| |||| ||| ||||||||||||||||||||| |||||| Sbjct: 25688864 gtcatcggcagcctgcaccacctcgccggcaagctcccgcaccgcgcgatgcgcgacctg 25688923 Score = 52.0 bits (26), Expect = 7e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 183 ggcgcgctcccgcaccgcgcgatgcgggacctgtcccg 220 ||||||||||||||||||||| |||| |||||| |||| Sbjct: 17414012 ggcgcgctcccgcaccgcgcgctgcgcgacctggcccg 17413975 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 tgggcgctccccgtcatcggccacctccaccac 176 ||||||||||| || |||||||||||||||||| Sbjct: 25740375 tgggcgctcccggtgatcggccacctccaccac 25740343 Score = 50.1 bits (25), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Minus Query: 159 atcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgcgatgcgggacctg 215 |||||||||||||||||| | | ||||||||||||||| ||| ||||| |||||| Sbjct: 25715067 atcggccacctccaccacctggtgggcgcgctcccgcacgtcgccatgcgcgacctg 25715011 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 190 tcccgcaccgcgcgatgcgggacctg 215 ||||||||||||||||||| |||||| Sbjct: 25709048 tcccgcaccgcgcgatgcgtgacctg 25709073 Score = 42.1 bits (21), Expect = 0.71 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 cgctcccgcaccgcgcgatgcgggacctg 215 ||||||||||||||||| |||| |||||| Sbjct: 17208734 cgctcccgcaccgcgcgctgcgcgacctg 17208762 Score = 42.1 bits (21), Expect = 0.71 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggcgctccccgtcatcggccacctccacc 174 |||||| ||| |||||||||||||||||| Sbjct: 162432 ggcgctgcccatcatcggccacctccacc 162460
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 83.8 bits (42), Expect = 2e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 135 ccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccg 194 |||||||||||||| ||||| || |||||||||||||||||| | || || ||||||||| Sbjct: 35695 ccgtcgccatgggcactcccggtgatcggccacctccaccacctagccggggcgctcccg 35754 Query: 195 caccgcgcgatgcg 208 |||||||| ||||| Sbjct: 35755 caccgcgccatgcg 35768 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 132 ccgccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctc 191 ||||||||||| ||||||||||| || |||| |||||||||||| | || ||||||||| Sbjct: 44484 ccgccgtcgccgtgggcgctcccggtggtcggtcacctccaccacctggcgggcgcgctc 44543 Query: 192 ccgcaccgcgcgatgcg 208 | ||||||||| ||||| Sbjct: 44544 cagcaccgcgccatgcg 44560 Score = 63.9 bits (32), Expect = 2e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 132 ccgccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctc 191 ||||||||||| |||| ||| || || ||||| ||||| |||||| | || ||||||||| Sbjct: 5647 ccgccgtcgccgtgggggctgccggtgatcgggcacctgcaccacctggcgggcgcgctc 5588 Query: 192 ccgcaccgcgcgatgcgggacctg 215 ||||||| ||| ||||| |||||| Sbjct: 5587 ccgcaccacgccatgcgcgacctg 5564 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 tgggcgctccccgtcatcggccacctccaccac 176 ||||||||||| || |||||||||||||||||| Sbjct: 22579 tgggcgctcccggtgatcggccacctccaccac 22547
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 63.9 bits (32), Expect = 2e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 132 ccgccgtcgccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctc 191 ||||||||||| |||| ||| || || ||||| ||||| |||||| | || ||||||||| Sbjct: 146888 ccgccgtcgccgtgggggctgccggtgatcgggcacctgcaccacctggcgggcgcgctc 146829 Query: 192 ccgcaccgcgcgatgcgggacctg 215 ||||||| ||| ||||| |||||| Sbjct: 146828 ccgcaccacgccatgcgcgacctg 146805 Score = 56.0 bits (28), Expect = 5e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgcgatgcgggacctg 215 ||||||||| ||| |||||| |||| ||| ||||||||||||||||||||| |||||| Sbjct: 122331 gtcatcggcagcctgcaccacctcgccggcaagctcccgcaccgcgcgatgcgcgacctg 122390 Score = 56.0 bits (28), Expect = 5e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgcgatgcgggacctg 215 ||||||||| ||| |||||| |||| ||| ||||||||||||||||||||| |||||| Sbjct: 112309 gtcatcggcagcctgcaccacctcgccggcaagctcccgcaccgcgcgatgcgcgacctg 112368 Score = 50.1 bits (25), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Minus Query: 159 atcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgcgatgcgggacctg 215 |||||||||||||||||| | | ||||||||||||||| ||| ||||| |||||| Sbjct: 138512 atcggccacctccaccacctggtgggcgcgctcccgcacgtcgccatgcgcgacctg 138456 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 190 tcccgcaccgcgcgatgcgggacctg 215 ||||||||||||||||||| |||||| Sbjct: 132493 tcccgcaccgcgcgatgcgtgacctg 132518
>ref|XM_464379.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1557 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 144 tgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgc 202 |||||||| || |||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 133 tgggcgctgcctgtcatcggccacctgcaccacctcgccggcgacctcccgcaccgcgc 191
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 144 tgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgc 202 |||||||| || |||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 4826543 tgggcgctgcctgtcatcggccacctgcaccacctcgccggcgacctcccgcaccgcgc 4826601 Score = 42.1 bits (21), Expect = 0.71 Identities = 50/59 (84%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 160 tcggccacctccaccacgtcgcaggcgcgctcccgc---accgcgcgatgcgggacctg 215 |||||||||| |||||| |||| |||| |||||||| ||||||| ||||| |||||| Sbjct: 4828801 tcggccacctgcaccacctcgccggcgggctcccgccgcaccgcgccatgcgcgacctg 4828859
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 144 tgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgc 202 |||||||| || |||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 107133 tgggcgctgcctgtcatcggccacctgcaccacctcgccggcgacctcccgcaccgcgc 107191 Score = 42.1 bits (21), Expect = 0.71 Identities = 50/59 (84%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 160 tcggccacctccaccacgtcgcaggcgcgctcccgc---accgcgcgatgcgggacctg 215 |||||||||| |||||| |||| |||| |||||||| ||||||| ||||| |||||| Sbjct: 109391 tcggccacctgcaccacctcgccggcgggctcccgccgcaccgcgccatgcgcgacctg 109449
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 144 tgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgcgc 202 |||||||| || |||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 68702 tgggcgctgcctgtcatcggccacctgcaccacctcgccggcgacctcccgcaccgcgc 68760 Score = 42.1 bits (21), Expect = 0.71 Identities = 50/59 (84%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 160 tcggccacctccaccacgtcgcaggcgcgctcccgc---accgcgcgatgcgggacctg 215 |||||||||| |||||| |||| |||| |||||||| ||||||| ||||| |||||| Sbjct: 70960 tcggccacctgcaccacctcgccggcgggctcccgccgcaccgcgccatgcgcgacctg 71018
>gb|AY062168.1| Musa acuminata cytochrome P450-1 mRNA, complete cds Length = 1749 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 149 gctccccgtcatcggccacctccacc 174 |||||||||||||||||||||||||| Sbjct: 169 gctccccgtcatcggccacctccacc 194
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 52.0 bits (26), Expect = 7e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 183 ggcgcgctcccgcaccgcgcgatgcgggacctgtcccg 220 ||||||||||||||||||||| |||| |||||| |||| Sbjct: 45053 ggcgcgctcccgcaccgcgcgctgcgcgacctggcccg 45016
>dbj|AB036772.1| Triticum aestivum N-1 mRNA for cytochrome P450, complete cds Length = 1957 Score = 48.1 bits (24), Expect = 0.011 Identities = 36/40 (90%) Strand = Plus / Plus Query: 140 gccatgggcgctccccgtcatcggccacctccaccacgtc 179 ||||||| ||||||| ||||||||| ||||||||||||| Sbjct: 207 gccatggacgctcccggtcatcggcagcctccaccacgtc 246
>ref|XM_469675.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1852 Score = 46.1 bits (23), Expect = 0.045 Identities = 29/31 (93%) Strand = Plus / Plus Query: 185 cgcgctcccgcaccgcgcgatgcgggacctg 215 |||||| ||||||||||||||||| |||||| Sbjct: 292 cgcgctgccgcaccgcgcgatgcgtgacctg 322
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.045 Identities = 29/31 (93%) Strand = Plus / Plus Query: 185 cgcgctcccgcaccgcgcgatgcgggacctg 215 |||||| ||||||||||||||||| |||||| Sbjct: 30138564 cgcgctgccgcaccgcgcgatgcgtgacctg 30138594
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 46.1 bits (23), Expect = 0.045 Identities = 29/31 (93%) Strand = Plus / Minus Query: 185 cgcgctcccgcaccgcgcgatgcgggacctg 215 |||||| ||||||||||||||||| |||||| Sbjct: 85331 cgcgctgccgcaccgcgcgatgcgtgacctg 85301
>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0039F06, complete sequence Length = 133022 Score = 46.1 bits (23), Expect = 0.045 Identities = 47/55 (85%) Strand = Plus / Minus Query: 141 ccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgc 195 |||||||| ||||| || ||||||||||| |||||| || ||||||||||||| Sbjct: 20046 ccatgggctctcccggtgatcggccacctgcaccacctcatgggcgcgctcccgc 19992 Score = 40.1 bits (20), Expect = 2.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 144 tgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgc 195 ||||| ||||| || ||||||||||| |||||| || ||||||||||||| Sbjct: 39303 tgggctctcccggtgatcggccacctgcaccacctcatgggcgcgctcccgc 39252
>dbj|AB124856.1| Triticum aestivum CYP71C8v1 mRNA for P450, complete cds Length = 1880 Score = 46.1 bits (23), Expect = 0.045 Identities = 26/27 (96%) Strand = Plus / Plus Query: 150 ctccccgtcatcggccacctccaccac 176 |||||| |||||||||||||||||||| Sbjct: 220 ctccccatcatcggccacctccaccac 246
>gb|AF321863.1|AF321863 Lolium rigidum clone Lol-3-k putative cytochrome P450 mRNA, complete cds Length = 1832 Score = 46.1 bits (23), Expect = 0.045 Identities = 29/31 (93%) Strand = Plus / Plus Query: 185 cgcgctcccgcaccgcgcgatgcgggacctg 215 |||||| ||||||||||||||||| |||||| Sbjct: 152 cgcgctgccgcaccgcgcgatgcgcgacctg 182
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.045 Identities = 47/55 (85%) Strand = Plus / Plus Query: 141 ccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgc 195 |||||||| ||||| || ||||||||||| |||||| || ||||||||||||| Sbjct: 24185380 ccatgggctctcccggtgatcggccacctgcaccacctcatgggcgcgctcccgc 24185434 Score = 40.1 bits (20), Expect = 2.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 144 tgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgc 195 ||||| ||||| || ||||||||||| |||||| || ||||||||||||| Sbjct: 24166123 tgggctctcccggtgatcggccacctgcaccacctcatgggcgcgctcccgc 24166174 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tgctcctccttcctctgctc 62 |||||||||||||||||||| Sbjct: 1632431 tgctcctccttcctctgctc 1632450
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.045 Identities = 29/31 (93%) Strand = Plus / Plus Query: 185 cgcgctcccgcaccgcgcgatgcgggacctg 215 |||||| ||||||||||||||||| |||||| Sbjct: 30229986 cgcgctgccgcaccgcgcgatgcgtgacctg 30230016
>gb|AF123603.1| Triticum aestivum clone CYP71C3-TA cytochrome P450 mRNA, complete cds Length = 1953 Score = 46.1 bits (23), Expect = 0.045 Identities = 26/27 (96%) Strand = Plus / Plus Query: 150 ctccccgtcatcggccacctccaccac 176 |||||| |||||||||||||||||||| Sbjct: 233 ctccccatcatcggccacctccaccac 259
>dbj|AK110867.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-E02, full insert sequence Length = 1852 Score = 46.1 bits (23), Expect = 0.045 Identities = 29/31 (93%) Strand = Plus / Plus Query: 185 cgcgctcccgcaccgcgcgatgcgggacctg 215 |||||| ||||||||||||||||| |||||| Sbjct: 292 cgcgctgccgcaccgcgcgatgcgtgacctg 322
>dbj|AK067543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112D07, full insert sequence Length = 1914 Score = 46.1 bits (23), Expect = 0.045 Identities = 47/55 (85%) Strand = Plus / Plus Query: 141 ccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgc 195 |||||||| ||||| || ||||||||||| |||||| || ||||||||||||| Sbjct: 218 ccatgggctctcccggtgatcggccacctgcaccacctcatgggcgcgctcccgc 272
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.045 Identities = 47/55 (85%) Strand = Plus / Plus Query: 141 ccatgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgc 195 |||||||| ||||| || ||||||||||| |||||| || ||||||||||||| Sbjct: 24497049 ccatgggctctcccggtgatcggccacctgcaccacctcatgggcgcgctcccgc 24497103 Score = 40.1 bits (20), Expect = 2.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 144 tgggcgctccccgtcatcggccacctccaccacgtcgcaggcgcgctcccgc 195 ||||| ||||| || ||||||||||| |||||| || ||||||||||||| Sbjct: 24477792 tgggctctcccggtgatcggccacctgcaccacctcatgggcgcgctcccgc 24477843 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tgctcctccttcctctgctc 62 |||||||||||||||||||| Sbjct: 1630152 tgctcctccttcctctgctc 1630171
>ref|XM_472908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1530 Score = 44.1 bits (22), Expect = 0.18 Identities = 39/44 (88%), Gaps = 3/44 (6%) Strand = Plus / Plus Query: 157 tcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 |||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 140 tcatcggcaacctccaccaggtcg---gcgcgctcccgcaccgc 180
>ref|XM_472907.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 44.1 bits (22), Expect = 0.18 Identities = 39/44 (88%), Gaps = 3/44 (6%) Strand = Plus / Plus Query: 157 tcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 |||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 143 tcatcggcaacctccaccaggtcg---gcgcgctcccgcaccgc 183
>gb|BT018846.1| Zea mays clone EL01N0555A04.d mRNA sequence Length = 1672 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 cccgtcatcggccacctccacc 174 |||||||||||||||||||||| Sbjct: 157 cccgtcatcggccacctccacc 178
>gb|AC148036.2| Homo sapiens fosmid clone XXFOS-86462G6 from UL, complete sequence Length = 42208 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 ctctccatgctcctccttcctc 57 |||||||||||||||||||||| Sbjct: 40724 ctctccatgctcctccttcctc 40745
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 44.1 bits (22), Expect = 0.18 Identities = 39/44 (88%), Gaps = 3/44 (6%) Strand = Plus / Minus Query: 157 tcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 |||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 23160 tcatcggcaacctccaccaggtcg---gcgcgctcccgcaccgc 23120 Score = 44.1 bits (22), Expect = 0.18 Identities = 39/44 (88%), Gaps = 3/44 (6%) Strand = Plus / Minus Query: 157 tcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 |||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 19128 tcatcggcaacctccaccaggtcg---gcgcgctcccgcaccgc 19088
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.18 Identities = 39/44 (88%), Gaps = 3/44 (6%) Strand = Plus / Minus Query: 157 tcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 |||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 24026181 tcatcggcaacctccaccaggtcg---gcgcgctcccgcaccgc 24026141 Score = 44.1 bits (22), Expect = 0.18 Identities = 39/44 (88%), Gaps = 3/44 (6%) Strand = Plus / Minus Query: 157 tcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 |||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 24022149 tcatcggcaacctccaccaggtcg---gcgcgctcccgcaccgc 24022109 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cggccgcgtcctccgccgtc 139 |||||||||||||||||||| Sbjct: 33913897 cggccgcgtcctccgccgtc 33913916
>dbj|AK121175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082O06, full insert sequence Length = 1733 Score = 44.1 bits (22), Expect = 0.18 Identities = 39/44 (88%), Gaps = 3/44 (6%) Strand = Plus / Plus Query: 157 tcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 |||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 199 tcatcggcaacctccaccaggtcg---gcgcgctcccgcaccgc 239
>dbj|AK071438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091P04, full insert sequence Length = 907 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Minus Query: 190 tcccgcaccgcgcgatgcgggacctg 215 ||||||||||||||||||| |||||| Sbjct: 643 tcccgcaccgcgcgatgcgtgacctg 618
>ref|NM_194828.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBa0030B02.2), mRNA Length = 1548 Score = 42.1 bits (21), Expect = 0.71 Identities = 39/45 (86%) Strand = Plus / Plus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 ||||||||| |||||| | ||||||| || | ||||||||||||| Sbjct: 118 gtcatcggcaacctcctcgacgtcgccggtgagctcccgcaccgc 162
>ref|XM_464380.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 42.1 bits (21), Expect = 0.71 Identities = 50/59 (84%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 160 tcggccacctccaccacgtcgcaggcgcgctcccgc---accgcgcgatgcgggacctg 215 |||||||||| |||||| |||| |||| |||||||| ||||||| ||||| |||||| Sbjct: 134 tcggccacctgcaccacctcgccggcgggctcccgccgcaccgcgccatgcgcgacctg 192
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence Length = 146836 Score = 42.1 bits (21), Expect = 0.71 Identities = 39/45 (86%) Strand = Plus / Minus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 ||||||||| |||||| | ||||||| || | ||||||||||||| Sbjct: 17582 gtcatcggcaacctcctcgacgtcgccggtgagctcccgcaccgc 17538
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 ctccccgtcatcggccacctccacc 174 ||||||||| ||||||||||||||| Sbjct: 24219996 ctccccgtcgtcggccacctccacc 24219972 Score = 42.1 bits (21), Expect = 0.71 Identities = 39/45 (86%) Strand = Plus / Minus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 ||||||||| |||||| | ||||||| || | ||||||||||||| Sbjct: 4986461 gtcatcggcaacctcctcgacgtcgccggtgagctcccgcaccgc 4986417 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tgctcctccttcctctgctc 62 |||||||||||||||||||| Sbjct: 1587857 tgctcctccttcctctgctc 1587876
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 0.71 Identities = 39/45 (86%) Strand = Plus / Minus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 ||||||||| |||||| | ||||||| || | ||||||||||||| Sbjct: 2690806 gtcatcggcaacctcctcgacgtcgccggtgagctcccgcaccgc 2690762
>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA, complete cds Length = 1719 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctccccgtcatcggccacctccacc 174 ||||||||| ||||||||||||||| Sbjct: 176 ctccccgtcgtcggccacctccacc 200
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 cgcaccgcgcgatgcgggacc 213 ||||||||||||||||||||| Sbjct: 8747414 cgcaccgcgcgatgcgggacc 8747434
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 42.1 bits (21), Expect = 0.71 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggcgctccccgtcatcggccacctccacc 174 |||||| ||| |||||||||||||||||| Sbjct: 27328 ggcgctgcccatcatcggccacctccacc 27356
>dbj|AP004688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036C11 Length = 137995 Score = 42.1 bits (21), Expect = 0.71 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 cgctcccgcaccgcgcgatgcgggacctg 215 ||||||||||||||||| |||| |||||| Sbjct: 57461 cgctcccgcaccgcgcgctgcgcgacctg 57489
>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full insert sequence Length = 1698 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctccccgtcatcggccacctccacc 174 ||||||||| ||||||||||||||| Sbjct: 170 ctccccgtcgtcggccacctccacc 194
>dbj|AK105993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H03, full insert sequence Length = 1728 Score = 42.1 bits (21), Expect = 0.71 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggcgctccccgtcatcggccacctccacc 174 |||||| ||| |||||||||||||||||| Sbjct: 175 ggcgctgcccatcatcggccacctccacc 203
>dbj|AK099468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023N04, full insert sequence Length = 1933 Score = 42.1 bits (21), Expect = 0.71 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggcgctccccgtcatcggccacctccacc 174 |||||| ||| |||||||||||||||||| Sbjct: 175 ggcgctgcccatcatcggccacctccacc 203
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 42.1 bits (21), Expect = 0.71 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 ggcgctccccgtcatcggccacctccacc 174 |||||| ||| |||||||||||||||||| Sbjct: 58110 ggcgctgcccatcatcggccacctccacc 58082
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 0.71 Identities = 39/45 (86%) Strand = Plus / Minus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 ||||||||| |||||| | ||||||| || | ||||||||||||| Sbjct: 2690757 gtcatcggcaacctcctcgacgtcgccggtgagctcccgcaccgc 2690713
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 ctccccgtcatcggccacctccacc 174 ||||||||| ||||||||||||||| Sbjct: 24148202 ctccccgtcgtcggccacctccacc 24148178 Score = 42.1 bits (21), Expect = 0.71 Identities = 39/45 (86%) Strand = Plus / Minus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 ||||||||| |||||| | ||||||| || | ||||||||||||| Sbjct: 4986443 gtcatcggcaacctcctcgacgtcgccggtgagctcccgcaccgc 4986399 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tgctcctccttcctctgctc 62 |||||||||||||||||||| Sbjct: 1587857 tgctcctccttcctctgctc 1587876
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 42.1 bits (21), Expect = 0.71 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 ctccccgtcatcggccacctccacc 174 ||||||||| ||||||||||||||| Sbjct: 104687 ctccccgtcgtcggccacctccacc 104663
>emb|AL831811.5|CNS08CAO Oryza sativa chromosome 12, . BAC OJ1561_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91053 Score = 42.1 bits (21), Expect = 0.71 Identities = 39/45 (86%) Strand = Plus / Minus Query: 156 gtcatcggccacctccaccacgtcgcaggcgcgctcccgcaccgc 200 ||||||||| |||||| | ||||||| || | ||||||||||||| Sbjct: 29835 gtcatcggcaacctcctcgacgtcgccggtgagctcccgcaccgc 29791
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tgctcctccttcctctgctc 62 |||||||||||||||||||| Sbjct: 146967 tgctcctccttcctctgctc 146986
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cggccgcgtcctccgccgtc 139 |||||||||||||||||||| Sbjct: 125796 cggccgcgtcctccgccgtc 125815
>gb|AC021683.10| Homo sapiens chromosome 17, clone RP11-13K12, complete sequence Length = 162615 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tccatgctcctccttcctct 58 |||||||||||||||||||| Sbjct: 39654 tccatgctcctccttcctct 39673
>dbj|AB124857.1| Triticum aestivum CYP71C8v3 mRNA for P450, complete cds Length = 1823 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tcatcggccacctccaccac 176 |||||||||||||||||||| Sbjct: 212 tcatcggccacctccaccac 231
>gb|AF145049.1|AF145049 Streptomyces fradiae tylosin-biosynthetic regulatory gene cluster, complete sequence Length = 10467 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccggccgcgtcctccgccgt 138 |||||||||||||||||||| Sbjct: 10350 ccggccgcgtcctccgccgt 10369
>gb|AY462230.1| Hordeum lechleri Bx5-like protein mRNA, complete cds Length = 1709 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tcatcggccacctccaccac 176 |||||||||||||||||||| Sbjct: 219 tcatcggccacctccaccac 238
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggccacctccaccacgtcgc 181 |||||||||||||||||||| Sbjct: 5304548 ggccacctccaccacgtcgc 5304567
>dbj|AK121911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P18, full insert sequence Length = 1855 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tgctcctccttcctctgctc 62 |||||||||||||||||||| Sbjct: 266 tgctcctccttcctctgctc 247
>dbj|AK130265.1| Homo sapiens cDNA FLJ26755 fis, clone PRS02037 Length = 2591 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tccatgctcctccttcctct 58 |||||||||||||||||||| Sbjct: 244 tccatgctcctccttcctct 263
>emb|Z58206.1|HS32B10R H.sapiens CpG island DNA genomic Mse1 fragment, clone 32b10, reverse read cpg32b10.rt1b Length = 242 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tccatgctcctccttcctct 58 |||||||||||||||||||| Sbjct: 170 tccatgctcctccttcctct 151
>gb|AY104522.1| Zea mays PCO077650 mRNA sequence Length = 1833 Score = 40.1 bits (20), Expect = 2.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 gctcccgcaccgcgcgatgcgggacctg 215 |||||| |||||||||||||| |||||| Sbjct: 175 gctccctcaccgcgcgatgcgcgacctg 202
>emb|AL161669.5|CNS01RHC Human chromosome 14 DNA sequence BAC R-736N17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192462 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgtgaaggcagccaccggcc 124 |||||||||||||||||||| Sbjct: 118456 cgtgaaggcagccaccggcc 118437
>gb|AF080567.1|AF080567 Zea mays pullulanase-type starch debranching enzyme (zpu1) mRNA, complete cds Length = 3261 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcctccgccgtcgccatggg 147 |||||||||||||||||||| Sbjct: 237 tcctccgccgtcgccatggg 218
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gcgcgctcccgcaccgcgcg 203 |||||||||||||||||||| Sbjct: 1645460 gcgcgctcccgcaccgcgcg 1645479
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tgctcctccttcctctgctc 62 |||||||||||||||||||| Sbjct: 37875 tgctcctccttcctctgctc 37856
>dbj|AB037245.1| Asparagus officinalis ASPI-2 mRNA for cytochrome P450, complete cds Length = 1506 Score = 40.1 bits (20), Expect = 2.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 cgctccccgtcatcggccacctccacca 175 |||||||||||||||| |||||||||| Sbjct: 125 cgctccccgtcatcggaaacctccacca 152 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,462,194 Number of Sequences: 3902068 Number of extensions: 1462194 Number of successful extensions: 127834 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 125600 Number of HSP's gapped (non-prelim): 2240 length of query: 220 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 198 effective length of database: 17,147,199,772 effective search space: 3395145554856 effective search space used: 3395145554856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
