>gb|AE005688.1| Caulobacter crescentus CB15 section 14 of 359 of the complete genome
          Length = 14376

 Score = 38.2 bits (19), Expect = 1.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 18   tggatcagcccaagccgac 36
            |||||||||||||||||||
Sbjct: 4676 tggatcagcccaagccgac 4694

>gb|AC009134.6|AC009134 Homo sapiens chromosome 16 clone RP11-505I1, complete sequence
          Length = 193236

 Score = 38.2 bits (19), Expect = 1.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     cctccatccatggatcagc 26
             |||||||||||||||||||
Sbjct: 70600 cctccatccatggatcagc 70582

>gb|U91325.1|HSU91325 Human chromosome 16p13.11 BAC clone CIT987SK-731F11 complete sequence
          Length = 135046

 Score = 38.2 bits (19), Expect = 1.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     cctccatccatggatcagc 26
             |||||||||||||||||||
Sbjct: 62068 cctccatccatggatcagc 62086

>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0072P02, complete sequence
          Length = 157488

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    tccatccatggatcagcc 27
             ||||||||||||||||||
Sbjct: 74226 tccatccatggatcagcc 74243

>gb|AF182305.2| Leishmania major 28S ribosomal RNA gene, partial sequence
          Length = 277

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 27  ccaagccgacgccgtcgg 44
           ||||||||||||||||||
Sbjct: 242 ccaagccgacgccgtcgg 225

>gb|AY450580.1| Calicium tricolor 18S small subunit ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1 and 5.8S
           ribosomal RNA gene, complete sequence; and internal
           transcribed spacer 2, partial sequence
          Length = 535

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 23  cagcccaagccgacgccg 40
           ||||||||||||||||||
Sbjct: 107 cagcccaagccgacgccg 90

>gb|DQ279964.1| Anodonta sp. SWH-2004 28S ribosomal RNA gene, partial sequence
          Length = 1126

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 27 ccaagccgacgccgtcgg 44
          ||||||||||||||||||
Sbjct: 34 ccaagccgacgccgtcgg 17

>gb|DQ279963.1| Neotrigonia margaritacea 28S ribosomal RNA gene, partial sequence
          Length = 2082

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 27  ccaagccgacgccgtcgg 44
           ||||||||||||||||||
Sbjct: 181 ccaagccgacgccgtcgg 164

>ref|XM_779137.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7940-PA
            (LOC579001), mRNA
          Length = 2166

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 14   tccatggatcagcccaag 31
            ||||||||||||||||||
Sbjct: 1171 tccatggatcagcccaag 1188

>emb|AL080243.21|HSBA12M9 Human DNA sequence from clone RP11-12M9 on chromosome 22, complete
              sequence
          Length = 176287

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 1      ggcaaaccctccatccat 18
              ||||||||||||||||||
Sbjct: 142276 ggcaaaccctccatccat 142259

>gb|DQ397595.1| Cenarchaeum symbiosum clone C03F09, complete sequence
          Length = 39172

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 27    ccaagccgacgccgtcgg 44
             ||||||||||||||||||
Sbjct: 27646 ccaagccgacgccgtcgg 27663

>gb|DQ397590.1| Cenarchaeum symbiosum clone C01G02, complete sequence
          Length = 39399

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 27   ccaagccgacgccgtcgg 44
            ||||||||||||||||||
Sbjct: 1492 ccaagccgacgccgtcgg 1475

>gb|DQ397541.1| Cenarchaeum symbiosum clone C01B03, complete sequence
          Length = 43871

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 27    ccaagccgacgccgtcgg 44
             ||||||||||||||||||
Sbjct: 20708 ccaagccgacgccgtcgg 20691

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 10       tccatccatggatcagcc 27
                ||||||||||||||||||
Sbjct: 19355000 tccatccatggatcagcc 19355017

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                      
Query: 24       agcccaagccgacgccgtcggc 45
                ||||||||||||||||| ||||
Sbjct: 26307222 agcccaagccgacgccgccggc 26307243

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 25       gcccaagccgacgccgtc 42
                ||||||||||||||||||
Sbjct: 19714696 gcccaagccgacgccgtc 19714713

>dbj|AP004360.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1166B08
          Length = 147667

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 25    gcccaagccgacgccgtc 42
             ||||||||||||||||||
Sbjct: 63318 gcccaagccgacgccgtc 63335

>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0085J13
          Length = 130185

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 24   agcccaagccgacgccgtcggc 45
            ||||||||||||||||| ||||
Sbjct: 4949 agcccaagccgacgccgccggc 4970

>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0453H04
          Length = 175047

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 24     agcccaagccgacgccgtcggc 45
              ||||||||||||||||| ||||
Sbjct: 171762 agcccaagccgacgccgccggc 171783

>dbj|AB126331.1| Unio douglasiae gene for ITS2, 28S rRNA, partial sequence,
           country:Japan: central Honshu (Kitaura lake)
          Length = 3722

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 27  ccaagccgacgccgtcgg 44
           ||||||||||||||||||
Sbjct: 294 ccaagccgacgccgtcgg 277

>emb|X52472.1|TAPRP T.aestivum mRNA for a proline-rich protein
          Length = 1487

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 24  agcccaagccgacgccgt 41
           ||||||||||||||||||
Sbjct: 208 agcccaagccgacgccgt 225

>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 6      accctccatccatggatc 23
              ||||||||||||||||||
Sbjct: 199885 accctccatccatggatc 199868

>gb|AF095327.1|AF095327 Trichinella spiralis 28S ribosomal RNA gene, partial sequence
          Length = 278

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 27  ccaagccgacgccgtcgg 44
           ||||||||||||||||||
Sbjct: 243 ccaagccgacgccgtcgg 226

>emb|CR352308.33| Zebrafish DNA sequence from clone CH211-195H3 in linkage group 8,
             complete sequence
          Length = 202242

 Score = 36.2 bits (18), Expect = 5.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    catccatggatcagccca 29
             ||||||||||||||||||
Sbjct: 85502 catccatggatcagccca 85485


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 268,479
Number of Sequences: 3902068
Number of extensions: 268479
Number of successful extensions: 67280
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67098
Number of HSP's gapped (non-prelim): 182
length of query: 45
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 25
effective length of database: 17,155,003,908
effective search space: 428875097700
effective search space used: 428875097700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)