>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0076K20, complete sequence
          Length = 127338

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                       
Query: 97   atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
            ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 4698 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 4740

>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0052H02, complete sequence
          Length = 159632

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 97   atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
            ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 1907 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 1865

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                          
Query: 97      atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
               ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 2722100 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 2722058

>dbj|AK119781.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F02, full
           insert sequence
          Length = 990

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 97  atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
           ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 170 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 212

>dbj|AK106091.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B08, full
           insert sequence
          Length = 1020

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 97  atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
           ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 174 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 216

>dbj|AK104479.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F10, full
           insert sequence
          Length = 994

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 97  atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
           ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 174 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 216

>dbj|AK104466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C09, full
           insert sequence
          Length = 1020

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 97  atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
           ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 174 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 216

>dbj|AK104372.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E09, full
           insert sequence
          Length = 994

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 97  atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
           ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 174 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 216

>dbj|AK104217.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C11, full
           insert sequence
          Length = 1020

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 97  atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
           ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 174 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 216

>dbj|AK070326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I16, full
           insert sequence
          Length = 1026

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 97  atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
           ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 175 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 217

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                          
Query: 97      atgggcaaggactgcggcaaccacggcgaggacgacgtccggc 139
               ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 2731131 atgggcaaggactgcggcaaccacggcgacgacgacatccggc 2731089

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 116     accacggcgaggacgacgtcc 136
               |||||||||||||||||||||
Sbjct: 4739260 accacggcgaggacgacgtcc 4739280

>ref|XM_473015.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1134

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 caaccacggcgaggacgacg 133
           ||||||||||||||||||||
Sbjct: 492 caaccacggcgaggacgacg 511

>ref|NM_001031353.1| Gallus gallus similar to receptor kinase (LOC426000), mRNA
          Length = 2853

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   acgccatgggcaaggactgc 111
            ||||||||||||||||||||
Sbjct: 1686 acgccatgggcaaggactgc 1705

>emb|AJ720516.1| Gallus gallus mRNA for hypothetical protein, clone 19g20
          Length = 2853

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   acgccatgggcaaggactgc 111
            ||||||||||||||||||||
Sbjct: 1686 acgccatgggcaaggactgc 1705

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 114      caaccacggcgaggacgacg 133
                ||||||||||||||||||||
Sbjct: 24702980 caaccacggcgaggacgacg 24702999

>dbj|AK110895.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-A05, full
           insert sequence
          Length = 1499

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 caaccacggcgaggacgacg 133
           ||||||||||||||||||||
Sbjct: 623 caaccacggcgaggacgacg 642

>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
              epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
              unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
              complete cds
          Length = 185988

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    tgcggcaaccacggcgagga 128
              ||||||||||||||||||||
Sbjct: 100725 tgcggcaaccacggcgagga 100706



 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   tgcggcaaccacggcgagga 128
             ||||||||||||||||||||
Sbjct: 95749 tgcggcaaccacggcgagga 95730

>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
             complete sequence
          Length = 133856

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   caaccacggcgaggacgacg 133
             ||||||||||||||||||||
Sbjct: 92503 caaccacggcgaggacgacg 92522

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 82      agcagctcggacgccatgg 100
               |||||||||||||||||||
Sbjct: 2201613 agcagctcggacgccatgg 2201595

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 84      cagctcggacgccatgggc 102
               |||||||||||||||||||
Sbjct: 2430232 cagctcggacgccatgggc 2430214

>emb|AJ620477.1| Angiococcus disciformis partial ORF16, ORF15, ORF14, ORF13, ORF12,
            ORF11, ORF10, ORF9, ORF8, ORF7, ORF6, ORF5, ORF4, ORF3,
            tubA gene, ORF2, tubZ gene, ORF1, tubB gene, tubC gene,
            tubD gene, tubE gene, tubF gene, ORF17, ORF18, ORF19,
            ORF20, tubG gene, ORF21, ORF22, ORF23 and ORF24, strain
            An d48
          Length = 82868

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 120  cggcgaggacgacgtccgg 138
            |||||||||||||||||||
Sbjct: 4634 cggcgaggacgacgtccgg 4652

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 90      ggacgccatgggcaaggac 108
               |||||||||||||||||||
Sbjct: 1893058 ggacgccatgggcaaggac 1893076

>emb|AJ325699.1|HSA325699 Homo sapiens genomic sequence surrounding NotI site, clone JNB-281S
          Length = 1273

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 89  cggacgccatgggcaagga 107
           |||||||||||||||||||
Sbjct: 401 cggacgccatgggcaagga 383

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 91     gacgccatgggcaaggact 109
              |||||||||||||||||||
Sbjct: 667850 gacgccatgggcaaggact 667868

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 105     ggactgcggcaaccacggc 123
               |||||||||||||||||||
Sbjct: 2548528 ggactgcggcaaccacggc 2548546


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 533,478
Number of Sequences: 3902068
Number of extensions: 533478
Number of successful extensions: 55873
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55484
Number of HSP's gapped (non-prelim): 389
length of query: 145
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 124
effective length of database: 17,151,101,840
effective search space: 2126736628160
effective search space used: 2126736628160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)