>CHLP_SYNY3 (Q55087) Geranylgeranyl hydrogenase|
          Length = 407

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 26/55 (47%), Positives = 34/55 (61%)
 Frame = +1

Query: 1   RREVLDDFLRTRAQKAGAEVLNGLFLRYEEPKERNGTYTVHYNHYDSSNGKVGGE 165
           RREVLD FLR RA+K G +V+NG   + + P + +  YT+HY   D S G   GE
Sbjct: 93  RREVLDGFLRERAEKLGTKVINGTVYKLDIPSKDSDPYTLHY--ADHSVGGTTGE 145

>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box|
           protein 1) (Helicase CA1)
          Length = 617

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +1

Query: 19  DFLRTRAQKAGAEVLNGLFLRYEEPKERNGTYTVHYNHYDSSNGKVGGEK 168
           DF R   ++ G    NG F  +   KERNG  + +YN   SSN K  G +
Sbjct: 55  DFFRRAGRQTGN---NGGFFGFS--KERNGGTSANYNRGGSSNYKSSGNR 99

>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member|
           A1 (RNA-binding motif protein 1)
          Length = 496

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +3

Query: 9   GARRLPPYPRAEGRRRGPQWSLPKVRGAQGAQR 107
           G RR PP   A  R R P  SL   RG++G  R
Sbjct: 91  GGRRRPP---ASSRNRSPSGSLRSARGSRGGTR 120

>CD97_HUMAN (P48960) CD97 antigen precursor (Leukocyte antigen CD97)|
          Length = 835

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 61  LNGLFLRYEEPKERNGTYTVHYNHYDSSNGKVG 159
           +N +FL +   KE N      ++H +SS+G+ G
Sbjct: 445 VNSIFLSHNNTKELNSPILFAFSHLESSDGEAG 477


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,635,196
Number of Sequences: 219361
Number of extensions: 263756
Number of successful extensions: 796
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 80,573,946
effective HSP length: 31
effective length of database: 73,773,755
effective search space used: 1770570120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)