ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet49c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA... 293 9e-77
2ref|XM_467759.1| Oryza sativa (japonica cultivar-group), mRNA 168 3e-39
3ref|XM_506969.1| PREDICTED Oryza sativa (japonica cultivar-group... 168 3e-39
4dbj|AK098873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 3e-39
5dbj|AK061968.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 3e-39
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 7e-19
7dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 101 7e-19
8dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic D... 101 7e-19
9gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 42 0.52
10emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 0.52
11emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 42 0.52
12gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.1
13gb|AY658920.1| Synthetic construct Peudomonas aeruginosa clone F... 40 2.1
14ref|XM_504061.1| Yarrowia lipolytica CLIB122, YALI0E17391g predi... 40 2.1
15gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 2.1
16emb|CR847783.6| Zebrafish DNA sequence from clone DKEYP-2C8 in l... 40 2.1
17gb|AE012183.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 2.1
18gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 2.1
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
21gb|AE004600.1| Pseudomonas aeruginosa PAO1, section 161 of 529 o... 40 2.1
22dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
23dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
24dbj|AK068635.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.1
25dbj|AK059845.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.1
26gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.1
27emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 2.1
28ref|XM_473500.1| Oryza sativa (japonica cultivar-group), predic... 38 8.2
29gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome... 38 8.2
30ref|XM_364038.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 8.2
31gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 38 8.2
32gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, compl... 38 8.2
33emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom... 38 8.2
34emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4,... 38 8.2
35emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4,... 38 8.2
36dbj|AB226232.1| Aspergillus oryzae cDNA, contig sequence: AoEST3091 38 8.2
37dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 38 8.2
38gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 8.2
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.2
40dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.2
41dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.2
42gb|AC154850.2| Mus musculus BAC clone RP23-36B4 from chromosome ... 38 8.2
43gb|AE004789.1| Pseudomonas aeruginosa PAO1, section 350 of 529 o... 38 8.2
44dbj|AK119313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.2
45dbj|AK110850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.2
46emb|X94704.1|ABRS13 A.bisporus rs13 mRNA for 40S ribosomal prote... 38 8.2
47gb|AF107046.1|AF107046 Mycobacterium sp. FM10 probable regulator... 38 8.2
48gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 38 8.2
49gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 38 8.2
50emb|AJ225837.1|AIJ225837 Astropecten irregularis 28S ribosomal R... 38 8.2
51gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 8.2
52emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005... 38 8.2
53gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 38 8.2 
>gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA, complete cds
          Length = 1704

 Score =  293 bits (148), Expect = 9e-77
 Identities = 163/168 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggcgcgaggtgctcgacgacttcctccgtacccgcgcgcagaaggccggcgccgaggtc 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 514 aggcgcgaggtgctcgacgacttcctccgtaaccgcgcgcagaaggccggcgccgaggtc 573

                                                                       
Query: 61  ctcaatggtctcttcctaaggtacgaggagcccaaggagcgcaacggcacgtacacggtg 120
           |||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 574 ctcaatggcctcttcctaaggtatgaggcgcccaaggagcgcaacggcacgtacacggtg 633

                                                           
Query: 121 cactacaaccactacgacagctccaacggcaaggtgggcggcgagaag 168
           |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cactacaatcactacgacagctccaacggcaaggtgggcggcgagaag 681
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>ref|XM_467759.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1778

 Score =  168 bits (85), Expect = 3e-39
 Identities = 145/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 4   cgcgaggtgctcgacgacttcctccgtacccgcgcgcagaaggccggcgccgaggtcctc 63
           |||||||||||||||| || ||||||  |||||||  ||  |||||||||||||||| ||
Sbjct: 504 cgcgaggtgctcgacgcctacctccgctcccgcgccgagggggccggcgccgaggtcgtc 563

                                                                       
Query: 64  aatggtctcttcctaaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcac 123
           |||||||||||||| ||||| |||| ||||||||| | ||||||  |||||  |||||||
Sbjct: 564 aatggtctcttcctgaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcac 623

                                                        
Query: 124 tacaaccactacgacagctccaacggcaaggtgggcggcgagaag 168
           |||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 624 tacaaccactacgacagctccaacggcaaggccggcggcgagaag 668
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>ref|XM_506969.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E02.38
           mRNA
          Length = 1828

 Score =  168 bits (85), Expect = 3e-39
 Identities = 145/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 4   cgcgaggtgctcgacgacttcctccgtacccgcgcgcagaaggccggcgccgaggtcctc 63
           |||||||||||||||| || ||||||  |||||||  ||  |||||||||||||||| ||
Sbjct: 504 cgcgaggtgctcgacgcctacctccgctcccgcgccgagggggccggcgccgaggtcgtc 563

                                                                       
Query: 64  aatggtctcttcctaaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcac 123
           |||||||||||||| ||||| |||| ||||||||| | ||||||  |||||  |||||||
Sbjct: 564 aatggtctcttcctgaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcac 623

                                                        
Query: 124 tacaaccactacgacagctccaacggcaaggtgggcggcgagaag 168
           |||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 624 tacaaccactacgacagctccaacggcaaggccggcggcgagaag 668
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>dbj|AK098873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C18, full
           insert sequence
          Length = 1778

 Score =  168 bits (85), Expect = 3e-39
 Identities = 145/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 4   cgcgaggtgctcgacgacttcctccgtacccgcgcgcagaaggccggcgccgaggtcctc 63
           |||||||||||||||| || ||||||  |||||||  ||  |||||||||||||||| ||
Sbjct: 505 cgcgaggtgctcgacgcctacctccgctcccgcgccgagggggccggcgccgaggtcgtc 564

                                                                       
Query: 64  aatggtctcttcctaaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcac 123
           |||||||||||||| ||||| |||| ||||||||| | ||||||  |||||  |||||||
Sbjct: 565 aatggtctcttcctgaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcac 624

                                                        
Query: 124 tacaaccactacgacagctccaacggcaaggtgggcggcgagaag 168
           |||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 625 tacaaccactacgacagctccaacggcaaggccggcggcgagaag 669
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>dbj|AK061968.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H01, full
           insert sequence
          Length = 1828

 Score =  168 bits (85), Expect = 3e-39
 Identities = 145/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 4   cgcgaggtgctcgacgacttcctccgtacccgcgcgcagaaggccggcgccgaggtcctc 63
           |||||||||||||||| || ||||||  |||||||  ||  |||||||||||||||| ||
Sbjct: 504 cgcgaggtgctcgacgcctacctccgctcccgcgccgagggggccggcgccgaggtcgtc 563

                                                                       
Query: 64  aatggtctcttcctaaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcac 123
           |||||||||||||| ||||| |||| ||||||||| | ||||||  |||||  |||||||
Sbjct: 564 aatggtctcttcctgaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcac 623

                                                        
Query: 124 tacaaccactacgacagctccaacggcaaggtgggcggcgagaag 168
           |||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 624 tacaaccactacgacagctccaacggcaaggccggcggcgagaag 668
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 7e-19
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                            
Query: 78       aaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcactacaaccactacga 137
                |||||| |||| ||||||||| | ||||||  |||||  |||||||||||||||||||||
Sbjct: 31265959 aaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcactacaaccactacga 31266018

                                               
Query: 138      cagctccaacggcaaggtgggcggcgagaag 168
                |||||||||||||||||  ||||||||||||
Sbjct: 31266019 cagctccaacggcaaggccggcggcgagaag 31266049



 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                            
Query: 4        cgcgaggtgctcgacgacttcctccgtacccgcgcgcagaaggccggcgccgaggtcctc 63
                |||||||||||||||| || ||||||  |||||||  ||  |||||||||||||||| ||
Sbjct: 31265221 cgcgaggtgctcgacgcctacctccgctcccgcgccgagggggccggcgccgaggtcgtc 31265280

                                    
Query: 64       aatggtctcttcctaaggta 83
                |||||||||||||| |||||
Sbjct: 31265281 aatggtctcttcctgaggta 31265300



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 108      cacgtacacggtgcactaca 127
                ||||||||||||||||||||
Sbjct: 22083296 cacgtacacggtgcactaca 22083315
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>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1734_E02
          Length = 168566

 Score =  101 bits (51), Expect = 7e-19
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                          
Query: 78     aaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcactacaaccactacga 137
              |||||| |||| ||||||||| | ||||||  |||||  |||||||||||||||||||||
Sbjct: 145802 aaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcactacaaccactacga 145861

                                             
Query: 138    cagctccaacggcaaggtgggcggcgagaag 168
              |||||||||||||||||  ||||||||||||
Sbjct: 145862 cagctccaacggcaaggccggcggcgagaag 145892



 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                          
Query: 4      cgcgaggtgctcgacgacttcctccgtacccgcgcgcagaaggccggcgccgaggtcctc 63
              |||||||||||||||| || ||||||  |||||||  ||  |||||||||||||||| ||
Sbjct: 145064 cgcgaggtgctcgacgcctacctccgctcccgcgccgagggggccggcgccgaggtcgtc 145123

                                  
Query: 64     aatggtctcttcctaaggta 83
              |||||||||||||| |||||
Sbjct: 145124 aatggtctcttcctgaggta 145143
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>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1118_G04
          Length = 134464

 Score =  101 bits (51), Expect = 7e-19
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                         
Query: 78    aaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcactacaaccactacga 137
             |||||| |||| ||||||||| | ||||||  |||||  |||||||||||||||||||||
Sbjct: 35827 aaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcactacaaccactacga 35886

                                            
Query: 138   cagctccaacggcaaggtgggcggcgagaag 168
             |||||||||||||||||  ||||||||||||
Sbjct: 35887 cagctccaacggcaaggccggcggcgagaag 35917



 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                         
Query: 4     cgcgaggtgctcgacgacttcctccgtacccgcgcgcagaaggccggcgccgaggtcctc 63
             |||||||||||||||| || ||||||  |||||||  ||  |||||||||||||||| ||
Sbjct: 35089 cgcgaggtgctcgacgcctacctccgctcccgcgccgagggggccggcgccgaggtcgtc 35148

                                 
Query: 64    aatggtctcttcctaaggta 83
             |||||||||||||| |||||
Sbjct: 35149 aatggtctcttcctgaggta 35168
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 4       cgcgaggtgctcgacgacttcctcc 28
               |||||||||||||||||| ||||||
Sbjct: 2965213 cgcgaggtgctcgacgacatcctcc 2965189
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 3       gcgcgaggtgctcgacgacttcctc 27
               ||||||||||||||||||| |||||
Sbjct: 2547648 gcgcgaggtgctcgacgacatcctc 2547672
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     cagaaggccggcgccgaggtc 60
              |||||||||||||||||||||
Sbjct: 318674 cagaaggccggcgccgaggtc 318694
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    gtgctcgacgacttcctccg 29
             ||||||||||||||||||||
Sbjct: 48527 gtgctcgacgacttcctccg 48508
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>gb|AY658920.1| Synthetic construct Peudomonas aeruginosa clone FLH046844.01F
           PA1738 gene, partial cds
          Length = 915

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 5   gcgaggtgctcgacgacttcctcc 28
           |||||||||||| |||||||||||
Sbjct: 761 gcgaggtgctcggcgacttcctcc 738
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>ref|XM_504061.1| Yarrowia lipolytica CLIB122, YALI0E17391g predicted mRNA
          Length = 1572

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   ggtacgaggagcccaaggag 99
            ||||||||||||||||||||
Sbjct: 1184 ggtacgaggagcccaaggag 1203
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 40      cagaaggccggcgccgaggt 59
               ||||||||||||||||||||
Sbjct: 3767291 cagaaggccggcgccgaggt 3767310
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>emb|CR847783.6| Zebrafish DNA sequence from clone DKEYP-2C8 in linkage group 5,
            complete sequence
          Length = 184144

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 124  tacaaccactacgacagctccaac 147
            ||||||||||||||||||| ||||
Sbjct: 2837 tacaaccactacgacagcttcaac 2814
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>gb|AE012183.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 91
           of 460 of the complete genome
          Length = 11106

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  cagaaggccggcgccgaggt 59
           ||||||||||||||||||||
Sbjct: 506 cagaaggccggcgccgaggt 487
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 40      cagaaggccggcgccgaggt 59
               ||||||||||||||||||||
Sbjct: 4047938 cagaaggccggcgccgaggt 4047957
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 10       gtgctcgacgacttcctccg 29
                ||||||||||||||||||||
Sbjct: 11565261 gtgctcgacgacttcctccg 11565280
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 41      agaaggccggcgccgaggtc 60
               ||||||||||||||||||||
Sbjct: 4900925 agaaggccggcgccgaggtc 4900906
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>gb|AE004600.1| Pseudomonas aeruginosa PAO1, section 161 of 529 of the complete
            genome
          Length = 10314

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 5    gcgaggtgctcgacgacttcctcc 28
            |||||||||||| |||||||||||
Sbjct: 4085 gcgaggtgctcggcgacttcctcc 4108
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   cacgtacacggtgcactaca 127
             ||||||||||||||||||||
Sbjct: 57195 cacgtacacggtgcactaca 57214
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>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528E04
          Length = 170701

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    agaaggccggcgccgaggtc 60
             ||||||||||||||||||||
Sbjct: 88408 agaaggccggcgccgaggtc 88389
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>dbj|AK068635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157F10, full
           insert sequence
          Length = 849

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  agaaggccggcgccgaggtc 60
           ||||||||||||||||||||
Sbjct: 479 agaaggccggcgccgaggtc 498
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>dbj|AK059845.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E10, full
           insert sequence
          Length = 946

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  agaaggccggcgccgaggtc 60
           ||||||||||||||||||||
Sbjct: 454 agaaggccggcgccgaggtc 473
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 10       gtgctcgacgacttcctccg 29
                ||||||||||||||||||||
Sbjct: 11644450 gtgctcgacgacttcctccg 11644469
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      ggtacgaggagcccaaggag 99
               ||||||||||||||||||||
Sbjct: 2053503 ggtacgaggagcccaaggag 2053484
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>ref|XM_473500.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1056

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 11  tgctcgacgacttcctccg 29
           |||||||||||||||||||
Sbjct: 338 tgctcgacgacttcctccg 356
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>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12,
              complete sequence
          Length = 156263

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 46     gccggcgccgaggtcctcaatggtctc 72
              |||||||||||||||||| ||| ||||
Sbjct: 145067 gccggcgccgaggtcctccatgatctc 145041
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>ref|XM_364038.1| Magnaporthe grisea 70-15 hypothetical protein (MG08883.4) partial
           cds
          Length = 2241

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  gcgcagaaggccggcgccg 55
           |||||||||||||||||||
Sbjct: 925 gcgcagaaggccggcgccg 943
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>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0099P06, complete sequence
          Length = 135117

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 46   gccggcgccgaggtcctcaatggtctc 72
            |||||||||||||||||| ||| ||||
Sbjct: 1783 gccggcgccgaggtcctccatgatctc 1757
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>gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, complete sequence
          Length = 268886

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 62     tcaatggtctcttcctaag 80
              |||||||||||||||||||
Sbjct: 257124 tcaatggtctcttcctaag 257106
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>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 40     cagaaggccggcgccgagg 58
              |||||||||||||||||||
Sbjct: 267482 cagaaggccggcgccgagg 267464
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>emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0078D11,
             complete sequence
          Length = 115006

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    tgctcgacgacttcctccg 29
             |||||||||||||||||||
Sbjct: 16124 tgctcgacgacttcctccg 16142
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>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
              complete sequence
          Length = 147806

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 11     tgctcgacgacttcctccg 29
              |||||||||||||||||||
Sbjct: 136912 tgctcgacgacttcctccg 136930
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>dbj|AB226232.1| Aspergillus oryzae cDNA, contig sequence: AoEST3091
          Length = 1480

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 10  gtgctcgacgacttcctcc 28
           |||||||||||||||||||
Sbjct: 988 gtgctcgacgacttcctcc 970
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     gtgctcgacgacttcctcc 28
              |||||||||||||||||||
Sbjct: 382563 gtgctcgacgacttcctcc 382581
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 36      cgcgcagaaggccggcgcc 54
               |||||||||||||||||||
Sbjct: 2799725 cgcgcagaaggccggcgcc 2799707
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 11       tgctcgacgacttcctccg 29
                |||||||||||||||||||
Sbjct: 28129687 tgctcgacgacttcctccg 28129705
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 7       gaggtgctcgacgacttcc 25
               |||||||||||||||||||
Sbjct: 4807628 gaggtgctcgacgacttcc 4807610
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 46      gccggcgccgaggtcctcaatggtctc 72
               |||||||||||||||||| ||| ||||
Sbjct: 3579436 gccggcgccgaggtcctccatgatctc 3579410
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>gb|AC154850.2| Mus musculus BAC clone RP23-36B4 from chromosome 9, complete sequence
          Length = 247708

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 62    tcaatggtctcttcctaag 80
             |||||||||||||||||||
Sbjct: 60444 tcaatggtctcttcctaag 60426
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>gb|AE004789.1| Pseudomonas aeruginosa PAO1, section 350 of 529 of the complete
            genome
          Length = 17124

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 41   agaaggccggcgccgaggtcctc 63
            |||||||||||||| ||||||||
Sbjct: 5952 agaaggccggcgccaaggtcctc 5930



 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 45   ggccggcgccgaggtcctc 63
            |||||||||||||||||||
Sbjct: 4074 ggccggcgccgaggtcctc 4092
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>dbj|AK119313.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G10, full
            insert sequence
          Length = 2794

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 7    gaggtgctcgacgacttcc 25
            |||||||||||||||||||
Sbjct: 1673 gaggtgctcgacgacttcc 1691
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>dbj|AK110850.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-C05, full
           insert sequence
          Length = 1874

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 46  gccggcgccgaggtcctcaatggtctc 72
           |||||||||||||||||| ||| ||||
Sbjct: 168 gccggcgccgaggtcctccatgatctc 194
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>emb|X94704.1|ABRS13 A.bisporus rs13 mRNA for 40S ribosomal protein S13
          Length = 517

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 11  tgctcgacgacttcctccg 29
           |||||||||||||||||||
Sbjct: 120 tgctcgacgacttcctccg 102
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>gb|AF107046.1|AF107046 Mycobacterium sp. FM10 probable regulatory protein gene, partial
           cds; and probable cytochrome P450 and hypothetical
           protein genes, complete cds
          Length = 2217

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 6   cgaggtgctcgacgacttc 24
           |||||||||||||||||||
Sbjct: 830 cgaggtgctcgacgacttc 848
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 147    cggcaaggtgggcggcgag 165
              |||||||||||||||||||
Sbjct: 761002 cggcaaggtgggcggcgag 761020
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 6       cgaggtgctcgacgacttc 24
               |||||||||||||||||||
Sbjct: 2926248 cgaggtgctcgacgacttc 2926230
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>emb|AJ225837.1|AIJ225837 Astropecten irregularis 28S ribosomal RNA, partial, 5' end
          Length = 385

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 45  ggccggcgccgaggtcctc 63
           |||||||||||||||||||
Sbjct: 186 ggccggcgccgaggtcctc 204
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 7       gaggtgctcgacgacttcc 25
               |||||||||||||||||||
Sbjct: 4807609 gaggtgctcgacgacttcc 4807591
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>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161762

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     gaggtgctcgacgacttcc 25
             |||||||||||||||||||
Sbjct: 39503 gaggtgctcgacgacttcc 39521
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 147     cggcaaggtgggcggcgag 165
               |||||||||||||||||||
Sbjct: 1789993 cggcaaggtgggcggcgag 1790011


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 808,469
Number of Sequences: 3902068
Number of extensions: 808469
Number of successful extensions: 65913
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64632
Number of HSP's gapped (non-prelim): 1281
length of query: 168
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 146
effective length of database: 17,147,199,772
effective search space: 2503491166712
effective search space used: 2503491166712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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