ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet49c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor 46 2e-05
2GLT3_ARATH (Q9S772) Putative germin-like protein subfamily T mem... 46 2e-05
3AB19A_PRUPE (Q9ZRA4) Auxin-binding protein ABP19a precursor 45 4e-05
4AB19B_PRUPE (O04012) Auxin-binding protein ABP19b precursor 44 9e-05
5GLT1_ARATH (P92995) Germin-like protein subfamily T member 1 pre... 43 2e-04
6GLT2_ARATH (Q9LMC9) Germin-like protein subfamily T member 2 pre... 42 4e-04
7GL31_ARATH (P94040) Germin-like protein subfamily 3 member 1 pre... 39 0.005
8GL23_ARATH (P93000) Germin-like protein subfamily 2 member 3 pre... 37 0.014
9GLP1_BRANA (P46271) Germin-like protein 1 precursor 37 0.019
10GL25_ARATH (O65252) Probable germin-like protein subfamily 2 mem... 36 0.032
11GLP1_SINAL (P45854) Germin-like protein 1 precursor 33 0.16
12NEC1_NICPL (Q9SPV5) Nectarin-1 precursor (EC 1.15.1.1) (Superoxi... 32 0.35
13NEC1_NICLS (Q94EG3) Nectarin-1 precursor (EC 1.15.1.1) (Superoxi... 32 0.35
14GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 pre... 32 0.61
15GL21_ARATH (P94014) Germin-like protein subfamily 2 member 1 pre... 31 1.0
16HPCG_ECOLI (P42270) 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (... 28 5.1
17GL22_ARATH (Q9FZ27) Germin-like protein subfamily 2 member 2 pre... 28 8.7

>ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor|
          Length = 214

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +2

Query: 38  PVLISFLVLPFSAMALTQDFCAADLSCSDTPAGYPCK--TGVGAGDFYYHG 184
           P+L +F +L  S+ A  QDFC ADL+  + PAG+ CK    V   DF + G
Sbjct: 9   PILFTFFLLLSSSNAAVQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSG 59



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>GLT3_ARATH (Q9S772) Putative germin-like protein subfamily T member 3|
           precursor
          Length = 227

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = +2

Query: 56  LVLPFSAMALTQDFCAADLSCSDTPAGYPCKTGVGAGDFYYHG 184
           L LP   +   QDFC ADL  + T +GYPCK+ V + DF+Y G
Sbjct: 30  LSLPALKLNPFQDFCVADLQATPTNSGYPCKSQVTSEDFFYSG 72



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>AB19A_PRUPE (Q9ZRA4) Auxin-binding protein ABP19a precursor|
          Length = 209

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 38  PVLISFLVLPFSAMALTQDFCAADLSCSDTPAGYPCK--TGVGAGDFYYHG 184
           P+  +F +L  S+ A  QDFC AD    D PAGY CK    V   DF Y G
Sbjct: 4   PIFFTFFLLLSSSHASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSG 54



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>AB19B_PRUPE (O04012) Auxin-binding protein ABP19b precursor|
          Length = 209

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 38  PVLISFLVLPFSAMALTQDFCAADLSCSDTPAGYPCKTG--VGAGDFYYHG 184
           P+  +F +L  ++ A  QDFC AD    D PAGY CK    V   DF Y G
Sbjct: 4   PIFFTFFLLLSTSHASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSG 54



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>GLT1_ARATH (P92995) Germin-like protein subfamily T member 1 precursor|
          Length = 220

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +2

Query: 89  QDFCAADLSCSDTPAGYPCKTGVGAGDFYYHG 184
           QDFC  DL  S +  G+PCK+ V A DF+Y G
Sbjct: 34  QDFCVGDLKASASINGFPCKSAVSASDFFYSG 65



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>GLT2_ARATH (Q9LMC9) Germin-like protein subfamily T member 2 precursor|
          Length = 220

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +2

Query: 89  QDFCAADLSCSDTPAGYPCKTGVGAGDFYYHG 184
           QDFC  DL  S +  G+PCK+ V A DF++ G
Sbjct: 34  QDFCVGDLKASPSINGFPCKSSVSASDFFFSG 65



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>GL31_ARATH (P94040) Germin-like protein subfamily 3 member 1 precursor|
           (AtGER1) (At-GERM1) (AtGLP1)
          Length = 208

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +2

Query: 80  ALTQDFCAADLSCSDTPAGYPC--KTGVGAGDFYYHG 184
           A  QDFC A+L  ++TPAGYPC     V A DF + G
Sbjct: 17  ASVQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSG 53



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>GL23_ARATH (P93000) Germin-like protein subfamily 2 member 3 precursor|
          Length = 219

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
 Frame = +2

Query: 38  PVLISF-LVLPFSAMALT---QDFCAADLSCSDTPAGYPCK--TGVGAGDFYYHG 184
           P+ ++F LV    A+A T   QDFC ADLS      GYPCK    V   DFY+ G
Sbjct: 7   PIFVTFMLVAAHMALADTNMLQDFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIG 61



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>GLP1_BRANA (P46271) Germin-like protein 1 precursor|
          Length = 207

 Score = 36.6 bits (83), Expect = 0.019
 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +2

Query: 89  QDFCAADLSCSDTPAGYPC--KTGVGAGDFYY 178
           QDFC A+L  ++TPAGYPC     V A DF +
Sbjct: 20  QDFCVANLKRAETPAGYPCIRPIHVKASDFVF 51



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>GL25_ARATH (O65252) Probable germin-like protein subfamily 2 member 5|
           precursor
          Length = 213

 Score = 35.8 bits (81), Expect = 0.032
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +2

Query: 41  VLISFLVLPFSAMALTQDFCAADLSCSDTPAGYPCK--TGVGAGDFYYHG 184
           V+++ L +  ++  + QD C ADLS +    GY CK  T +   DFY+ G
Sbjct: 10  VVVTMLFVAMASAEMLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYFKG 59



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>GLP1_SINAL (P45854) Germin-like protein 1 precursor|
          Length = 211

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +2

Query: 41  VLISFLVLPFSAM--ALTQDFCAADLSCSDTPAGYPCKT--GVGAGDFYYHG 184
           + I F++  FS++  A  QDFC AD      P+GY CK    V   DF + G
Sbjct: 5   IQIFFILSLFSSISFASVQDFCVADPKGPQNPSGYSCKNPDQVTENDFAFSG 56



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>NEC1_NICPL (Q9SPV5) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase|
           [Mn])
          Length = 229

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 83  LTQDFCAADLSCSDTPAGYPCKTGVGAGDF 172
           + QD C ADL       G+PCKT   A DF
Sbjct: 37  MLQDVCVADLHSKVKVNGFPCKTNFTAADF 66



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>NEC1_NICLS (Q94EG3) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase|
           [Mn])
          Length = 229

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 83  LTQDFCAADLSCSDTPAGYPCKTGVGAGDF 172
           + QD C ADL       G+PCKT   A DF
Sbjct: 37  MLQDVCVADLHSKVKVNGFPCKTNFTAADF 66



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>GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 precursor|
           (AtGER3) (AtGLP2)
          Length = 211

 Score = 31.6 bits (70), Expect = 0.61
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 74  AMALTQDFCAADLSCSDTPAGYPCKT--GVGAGDFYYHG 184
           + A  QDFC AD     +P+GY CK    V   DF + G
Sbjct: 18  SFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTG 56



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>GL21_ARATH (P94014) Germin-like protein subfamily 2 member 1 precursor|
          Length = 207

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +2

Query: 47  ISFLVLPFSAMALTQDFCAADLSCSDTPAGYPCKTG--VGAGDFYYHG 184
           +SF +   +   + QD C ADL       G+PCK    V + DF+  G
Sbjct: 15  VSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQG 62



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>HPCG_ECOLI (P42270) 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)|
           (OHED hydratase)
          Length = 264

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 138 YPAGVSLQDRSAAQKSWVRAMAEKGRTRKEMRTG 37
           YP  ++++D  A Q+ WVR    +GRT K  + G
Sbjct: 31  YPE-ITIEDAYAVQREWVRLKIAEGRTLKGHKIG 63



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>GL22_ARATH (Q9FZ27) Germin-like protein subfamily 2 member 2 precursor|
          Length = 219

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 89  QDFCAADLSCSDTPAGYPCK--TGVGAGDFYYHG 184
           QD C AD S      G+PCK    +   DF++ G
Sbjct: 29  QDLCVADKSHGTKLNGFPCKETLNITESDFFFAG 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,263,654
Number of Sequences: 219361
Number of extensions: 255347
Number of successful extensions: 876
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 80,573,946
effective HSP length: 37
effective length of database: 72,457,589
effective search space used: 1738982136
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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