| Clone Name | baet49b10 |
|---|---|
| Clone Library Name | barley_pub |
>HAP3_YEAST (P13434) Transcriptional activator HAP3 (UAS2 regulatory protein A)| Length = 144 Score = 33.5 bits (75), Expect = 0.13 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 11/101 (10%) Frame = +2 Query: 26 SRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNI-----ETVVPGSAVGHDAKIIPAASECG 190 ++ N + + S ++ T R P N+ T+ P + V DAK EC Sbjct: 16 TQENGGNASSSGSLQQISTLREQDRWLPINNVARLMKNTLPPSAKVSKDAK--ECMQECV 73 Query: 191 TEISISSTLDSPDRSEAD------GGEIVMEMGALGGRNYA 295 +E+ T ++ DR AD G +I++ + ALG NYA Sbjct: 74 SELISFVTSEASDRCAADKRKTINGEDILISLHALGFENYA 114
>TALA_POVLY (P04008) Large T antigen| Length = 697 Score = 32.7 bits (73), Expect = 0.22 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = +3 Query: 78 TLPVHWEVPHPSKILKQSYPEAQLVMMLKSYLLLQNVGLRFQFHLHL 218 T+ V+ E H +K Q +P ++M + YLL +G+RF HLHL Sbjct: 567 TIKVNLEKKHVNK-RSQIFPP--VIMTMNEYLLPPTIGVRFALHLHL 610
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +2 Query: 206 SSTLDSPDRSEADGGEIVMEMGALGGRNYASENAEKDTHVLHSEVKDTSEEVVQPEKE 379 +S +D ++ +AD +V + LG A+++ +T +L E D EVV PE E Sbjct: 337 ASLMDFAEKIKADAAALVQALFNLGEMVTATQSVSDETLMLLGEEMDYKVEVVSPEDE 394
>STON2_HUMAN (Q8WXE9) Stonin-2 (Stoned B)| Length = 905 Score = 31.6 bits (70), Expect = 0.49 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = +2 Query: 170 PAASECGTEISISSTLDSPDRSEADGGEIVMEMGALGGRNYASENAEKDTHVLHSEVKDT 349 PA S+ GTE + SPD+SE+ GE N+ + +D HSE D+ Sbjct: 25 PAHSQGGTEEHLPGLSSSPDQSESSSGE-----------NHVVDGGSQDHS--HSEQDDS 71 Query: 350 SEEV 361 SE++ Sbjct: 72 SEKM 75
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = -1 Query: 308 QHSHWRSSDLQELPSPLQSHHHQPLIYLASQV*MKLKSQSHILKQQV*F*HHDQL 144 QH + Q+L SPL HHHQ QSH +QQ HH QL Sbjct: 1046 QHQQHQQHQQQQLHSPLHHHHHQ-------------GHQSHHAQQQ----HHPQL 1083
>NASP_RABIT (P27123) Nuclear autoantigenic sperm protein (NASP)| Length = 680 Score = 29.6 bits (65), Expect = 1.8 Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 15/130 (11%) Frame = +2 Query: 5 EELTSAVSRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETV--VPGSA------VGHDA 160 E+ + + + N++ ++A P +GG PK+ + T PG A VG D Sbjct: 178 EQPGTTLGKDNTAVEVEAEPVDATAKPVDVGGHEPKEQMATSGNEPGKAVLNQQLVGQDV 237 Query: 161 -------KIIPAASECGTEISISSTLDSPDRSEADGGEIVMEMGALGGRNYASENAEKDT 319 + A+E G+E+S ++SE + +V GA+ G + A + A D Sbjct: 238 PPVEESPMVTTEAAEVGSEVS--------EKSEQE-ATVVSNDGAVNGLSAAGDQASVDP 288 Query: 320 HVLHSEVKDT 349 V +T Sbjct: 289 QPSAERVTET 298
>SPAN_SALTY (P40613) Surface presentation of antigens protein spaN (Invasion| protein invJ) Length = 336 Score = 29.6 bits (65), Expect = 1.8 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 8/88 (9%) Frame = +2 Query: 131 VPGSAVGHDAKIIPAASEC---GTEISISSTLDSPDRSEADGGEIVMEMGALGGRNYA-- 295 V G + D K + + SE T IS + P ++A GE V + GA R+ A Sbjct: 134 VSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVRKEGAPLARDVAPA 193 Query: 296 ---SENAEKDTHVLHSEVKDTSEEVVQP 370 + N K H +VKD S+ +QP Sbjct: 194 RMAAANTGKPEDKDHKKVKDVSQLPLQP 221
>AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) Length = 1217 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/52 (28%), Positives = 21/52 (40%) Frame = +2 Query: 29 RSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVPGSAVGHDAKIIPAASE 184 RS + D P PR++G PK + P +AV +P SE Sbjct: 619 RSKEQTSKDRPKVKTKGRPRAVGSREPKPEVPAPTPQAAVPRPKPPVPTPSE 670
>NFYA1_ARATH (Q9LXV5) Nuclear transcription factor Y subunit A-1 (AtNF-YA-1)| (Transcriptional activator HAP2A) Length = 272 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +2 Query: 164 IIPAASECGTEISISSTLDSPDRSEADGGEIVMEMGALGGRN 289 ++P A G S SS+LD P+ SE++ E GAL G N Sbjct: 37 VVPQARPSGIP-SNSSSLDCPNGSESNDVHSASEDGALNGEN 77
>ATG13_YEAST (Q06628) Autophagy-related protein 13| Length = 738 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +2 Query: 32 SNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVPGSAVGHDAKIIPAASECGTEISISS 211 SNSS F ++P VH P P+ NIE G++VG +K + S+ + Sbjct: 390 SNSSFF----NQPPVHRPSMSSNYGPQMNIE----GTSVGSTSKYSSSFGNIRRHSSVKT 441 Query: 212 TLDSPDRSEA 241 T ++ S+A Sbjct: 442 TENAEKVSKA 451
>NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid X| receptor-interacting protein 13) (RIP13) Length = 2453 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 12/103 (11%) Frame = +2 Query: 104 SPKQNIETVVPGSAVGHDAKIIPAAS------------ECGTEISISSTLDSPDRSEADG 247 SP + T P +A++ +AS ECG E S S LD P ++AD Sbjct: 779 SPSSAVPTTKPAERESVEAQVTDSASAETAEPMDVDHEECGAEGS--SVLDPPAPTKADS 836 Query: 248 GEIVMEMGALGGRNYASENAEKDTHVLHSEVKDTSEEVVQPEK 376 + M++ + E+D + + E+VV E+ Sbjct: 837 VDPEMQVPENTASKGEGDAKERDLESTSEKTEARDEDVVVAEQ 879
>HBP1A_WHEAT (P23922) Transcription factor HBP-1a (Histone-specific| transcription factor HBP1) Length = 349 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/98 (22%), Positives = 36/98 (36%) Frame = +2 Query: 56 APSKPKVHTPRSLGGTSPKQNIETVVPGSAVGHDAKIIPAASECGTEISISSTLDSPDRS 235 AP H P G + PG+A + K P + + ++S +S S Sbjct: 95 APGVHPFHYPMQTNGNLEPAGAQGAAPGAAETN-GKNEPGKTSGPSANGVTSNSESGSDS 153 Query: 236 EADGGEIVMEMGALGGRNYASENAEKDTHVLHSEVKDT 349 E++G + + + N +EN V HS T Sbjct: 154 ESEGSDANSQNDSHSKENDVNENGSAQNGVSHSSSHGT 191
>ETF1_VARV (P33056) Early transcription factor 70 kDa subunit (EC 3.6.1.-)| (ATP-dependent helicase VETFS) (VETF small subunit) Length = 637 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +2 Query: 8 ELTSAVSRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVPGSAVGHDAKII 169 EL + + N FL P +TP +LG + ET+ G + K+I Sbjct: 147 ELMTVIKNKNKIPFLLLSGSPITNTPNTLGHIIDLMSEETIDFGEIISRGKKVI 200
>ETF1_VACCV (P04308) Early transcription factor 70 kDa subunit (EC 3.6.1.-)| (ATP-dependent helicase VETFS) (VETF small subunit) Length = 637 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +2 Query: 8 ELTSAVSRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVPGSAVGHDAKII 169 EL + + N FL P +TP +LG + ET+ G + K+I Sbjct: 147 ELMTVIKNKNKIPFLLLSGSPITNTPNTLGHIIDLMSEETIDFGEIISRGKKVI 200
>ETF1_VACCT (Q9JFA3) Early transcription factor 70 kDa subunit (EC 3.6.1.-)| (ATP-dependent helicase VETFS) (VETF small subunit) Length = 637 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +2 Query: 8 ELTSAVSRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVPGSAVGHDAKII 169 EL + + N FL P +TP +LG + ET+ G + K+I Sbjct: 147 ELMTVIKNKNKIPFLLLSGSPITNTPNTLGHIIDLMSEETIDFGEIISRGKKVI 200
>ETF1_VACCC (P20634) Early transcription factor 70 kDa subunit (EC 3.6.1.-)| (ATP-dependent helicase VETFS) (VETF small subunit) Length = 637 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +2 Query: 8 ELTSAVSRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVPGSAVGHDAKII 169 EL + + N FL P +TP +LG + ET+ G + K+I Sbjct: 147 ELMTVIKNKNKIPFLLLSGSPITNTPNTLGHIIDLMSEETIDFGEIISRGKKVI 200
>ETF1_VACCA (O93120) Early transcription factor 70 kDa subunit (EC 3.6.1.-)| (ATP-dependent helicase VETFS) (VETF small subunit) Length = 637 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +2 Query: 8 ELTSAVSRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVPGSAVGHDAKII 169 EL + + N FL P +TP +LG + ET+ G + K+I Sbjct: 147 ELMTVIKNKNKIPFLLLSGSPITNTPNTLGHIIDLMSEETIDFGEIISRGKKVI 200
>Y1263_SYNY3 (P74068) Hypothetical transport protein sll1263| Length = 310 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +3 Query: 111 SKILKQSYPEAQLVMMLKSYLLLQNVGLRFQFHLHLTRQ 227 S ++ QS P AQL + +L ++ G+R FHL TRQ Sbjct: 201 SSLMDQSLPPAQLQAITSCFLPYEDQGVR--FHLLQTRQ 237
>ZBT40_HUMAN (Q9NUA8) Zinc finger and BTB domain-containing protein 40| Length = 1239 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Frame = +2 Query: 23 VSRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIE-TVVPGSAVGHDAKIIPAASECGTEI 199 VS +S +F P KP+V S G P + E PG V A+ AA E+ Sbjct: 129 VSAPSSETFRKEPEKPQVEILSSEGAGEPHSSPELAATPGGPV--KAETEEAAHSVSQEM 186 Query: 200 SISSTLDSPDRSEAD 244 S++S + A+ Sbjct: 187 SVNSPTAQESQRNAE 201
>HM21_CAEEL (Q22811) Homeobox protein ceh-21| Length = 495 Score = 28.1 bits (61), Expect = 5.4 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Frame = +2 Query: 8 ELTSAVSRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVPGSAVG---HDAKIIPAA 178 E V + +SS + S+ K P + +PK I T S + + A+ Sbjct: 162 ESQKTVQTTGNSSRASSKSQEK-EVPGTKSQCAPK--IRTTPEQSKAATKRQSSTTVRAS 218 Query: 179 SECGTEISISSTLDSPDRSEADG 247 S CG+ +S +ST+ SPD + G Sbjct: 219 STCGSSVSSTSTVSSPDYTAKKG 241
>FOLD_HELPJ (Q9ZLQ4) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 290 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Frame = +3 Query: 114 KILKQSYPEAQLVMMLKSYLLLQNV-GLRFQFHLHLTRQIDQRLMV 248 K LK++ EA+L+ ++K Y QN+ G+ Q L L R ID ++++ Sbjct: 71 KTLKENITEAELLSLIKDYNTDQNISGILVQ--LPLPRSIDTKMIL 114
>HPAB3_PSESM (Q2QCI9) Effector protein hopAB3 (Avirulence protein avrPtoB)| [Includes: E3 ubiquitin-protein ligase (EC 6.3.2.-)] Length = 579 Score = 28.1 bits (61), Expect = 5.4 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%) Frame = +2 Query: 80 TPRSLGGTSPKQNIETVVPGSAVGHDAKIIPAASECGTEIS-ISSTLDSPDRSEADGGEI 256 TP++L GTSP+ AV H +I+ + G +++ I++ +D+ R A Sbjct: 125 TPQALAGTSPRHT-------GAVPHANRIVQQLVDAGADLAGINTMIDNAMRRHAI---- 173 Query: 257 VMEMGALGGRNYASENAEKDTHVLHSEVKDTSE 355 AL R S E H+L E+ SE Sbjct: 174 -----ALPSRTVQSILIEHFPHLLAGELISGSE 201
>SLK_HUMAN (Q9H2G2) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)| (STE20-like kinase) (STE20-related serine/threonine-protein kinase) (STE20-related kinase) (hSLK) (Serine/threonine-protein kinase 2) (CTCL tumor antigen se20-9) Length = 1235 Score = 27.7 bits (60), Expect = 7.0 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = +2 Query: 194 EISISSTLDSPDRSEADG---GEIVMEMGALGGRNYASENAEKDTHVLHSEVKDTSEEVV 364 E +I+S+ + D +E G GE + E + S A+ D L SEV+D S+ Sbjct: 618 EQAINSSENIMDINEEPGTTEGEEITESSSTEEMEVRSVVADTDQKALGSEVQDASKVTT 677 Query: 365 QPEKE 379 Q +KE Sbjct: 678 QIDKE 682
>NUP53_BRARE (Q6P6X9) Nucleoporin NUP53 (Nuclear pore complex protein Nup53)| (Nucleoporin Nup35) (35 kDa nucleoporin) Length = 308 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 56 APSKPKVHTPRSLGGTSPKQNIETVVPGSAVG 151 +P +P V TP+ G P ++I + GSAVG Sbjct: 61 SPPQPVVPTPKDKSGAPPVRSIYDDLNGSAVG 92
>SPEG_BRARE (Q696W0) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) Length = 2995 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +2 Query: 14 TSAVSRSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVP 136 T A S S++FL+ S PK+ TP L P ++ T+ P Sbjct: 2556 TPAQSADVSNTFLEVQSSPKMSTPLDL--PKPASSVNTMPP 2594
>YO25_BPHP1 (P51729) Hypothetical 13.1 kDa protein in lys 3'region (ORF25)| Length = 115 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 355 FGGVLHFRM*NVGIFLSILTGVVPTSKSSHLHY 257 FGG++ F+ +G+FL + G + S LHY Sbjct: 2 FGGIMEFKALFIGVFLIVFLGCI----GSTLHY 30
>Y2097_ARCFU (O28183) UPF0272 protein AF2097| Length = 395 Score = 27.3 bits (59), Expect = 9.2 Identities = 23/73 (31%), Positives = 31/73 (42%) Frame = +2 Query: 155 DAKIIPAASECGTEISISSTLDSPDRSEADGGEIVMEMGALGGRNYASENAEKDTHVLHS 334 DA IIPA + SI + RSE E++ G+LG R V H Sbjct: 272 DAVIIPAYGKKMRPASILKVISPTHRSEEVAAEVMRLTGSLGIRIIP---------VHHR 322 Query: 335 EVKDTSEEVVQPE 373 + + EEVV+ E Sbjct: 323 LISERMEEVVKVE 335
>EFTU_LACLA (Q9CEI0) Elongation factor Tu (EF-Tu)| Length = 395 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = +2 Query: 77 HTPRSLGGTSPKQNIETVVPGSAVGHDAKII-PAASECGTEISI 205 HT G + E V+PG V D ++I P A E GT SI Sbjct: 335 HTTDVTGSVKLPEGTEMVMPGDNVHIDVELIHPVAIEQGTTFSI 378
>CLIC6_MOUSE (Q8BHB9) Chloride intracellular channel 6| Length = 596 Score = 27.3 bits (59), Expect = 9.2 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +2 Query: 191 TEISISSTLDSPDRSEADGGEIVMEMGALGGRNYASENAEKDTHVLHSEVK---DTSEEV 361 TEI + + + S AD +G G ASE+A D H + K +T EE Sbjct: 222 TEIGGNESGELAGASAADAAGEGETLGKDGSEEAASEDARVDAHENGDQGKLQEETGEEE 281 Query: 362 VQPEKE 379 +PE E Sbjct: 282 ARPEPE 287
>DRD2_MELGA (O73810) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 436 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +2 Query: 92 LGGTSPKQNIETVVPGSAVGHDAKIIPAASECGTEISISSTLDSPDRSEADG 247 + TSP + T+V +A + ++P AS STLDSP + E +G Sbjct: 279 MSSTSPPER--TIVKAAAPSNHQLVVPVASS-------RSTLDSPGKVEKNG 321
>BEL1_FOAMV (P14353) BEL-1 protein| Length = 205 Score = 27.3 bits (59), Expect = 9.2 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = -1 Query: 110 WVRYLPVNGECAPSVCLVHPEKMNC 36 WV+Y P+ G +V ++H + NC Sbjct: 121 WVKYKPLRGIVGSAVFIMHKHQRNC 145
>TPIS1_RHIME (Q92QA1) Triosephosphate isomerase 1 (EC 5.3.1.1) (TIM 1)| (Triose-phosphate isomerase 1) Length = 256 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/66 (27%), Positives = 25/66 (37%) Frame = -3 Query: 213 VDEIEISVPHSEAAGMILAS*PTALPGTTVSIFCLGEVPPSERGVCTFGLLGASRKDELL 34 V E H E ++ A A V+I C+GE + T +L + L Sbjct: 97 VGHSERRTDHGEGDALVRAKTEAAHGADLVAIVCVGETEEERKAGRTLDILKRQLSESLP 156 Query: 33 DLLTAE 16 D TAE Sbjct: 157 DQATAE 162
>SSY1_WHEAT (Q43654) Starch synthase 1, chloroplast precursor (EC 2.4.1.21) (SS| I) (Starch synthase I-2) (SS I-2) Length = 647 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -3 Query: 375 FSGWTTSSEVSFTSECKTWVSFS 307 F GW S+E S+ + + WV FS Sbjct: 496 FEGWMRSTESSYKDKFRGWVGFS 518
>RGAP1_MOUSE (Q9WVM1) Rac GTPase-activating protein 1 (MgcRacGAP)| Length = 628 Score = 27.3 bits (59), Expect = 9.2 Identities = 24/76 (31%), Positives = 34/76 (44%) Frame = +2 Query: 29 RSNSSSFLDAPSKPKVHTPRSLGGTSPKQNIETVVPGSAVGHDAKIIPAASECGTEISIS 208 RSNS F+D P P V S+G T + N E++V + V +P+ +S Sbjct: 185 RSNSRQFIDGPPGP-VKKTCSIGSTVDQAN-ESIVAKTTV-----TVPSDGGPIEAVSTI 237 Query: 209 STLDSPDRSEADGGEI 256 TL S RS G + Sbjct: 238 ETLPSWTRSRGKSGPL 253 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,708,011 Number of Sequences: 219361 Number of extensions: 1052163 Number of successful extensions: 3743 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3624 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3742 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)