>ref|XM_506943.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19 mRNA
          Length = 1716

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 73/88 (82%)
 Strand = Plus / Minus

                                                                        
Query: 161  gccgtctgctccgagcccaaagggatcccgtcgtcgtccagtggagccacggtgccgttg 220
            ||||||||||||||||  || | |||  |||||||||  |||||| |||||||| |||||
Sbjct: 1568 gccgtctgctccgagcgaaatgcgatttcgtcgtcgttgagtggaaccacggtggcgttg 1509

                                        
Query: 221  agccacaggcatggcccgtgctcgccgg 248
            | |||| |||| || || ||||||||||
Sbjct: 1508 aaccaccggcacgggccatgctcgccgg 1481

>ref|XM_467513.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1716

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 161 gccgtctgctccgagcccaaagggatcccgtcgtcgtccagtggagccacggtgccgttg 220
           ||||||||||||||||  || | |||  |||||||||  |||||| |||||||| |||||
Sbjct: 149 gccgtctgctccgagcgaaatgcgatttcgtcgtcgttgagtggaaccacggtggcgttg 208

                                       
Query: 221 agccacaggcatggcccgtgctcgccgg 248
           | |||| |||| || || ||||||||||
Sbjct: 209 aaccaccggcacgggccatgctcgccgg 236

>ref|XM_506944.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19
           mRNA
          Length = 1737

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 161 gccgtctgctccgagcccaaagggatcccgtcgtcgtccagtggagccacggtgccgttg 220
           ||||||||||||||||  || | |||  |||||||||  |||||| |||||||| |||||
Sbjct: 155 gccgtctgctccgagcgaaatgcgatttcgtcgtcgttgagtggaaccacggtggcgttg 214

                                       
Query: 221 agccacaggcatggcccgtgctcgccgg 248
           | |||| |||| || || ||||||||||
Sbjct: 215 aaccaccggcacgggccatgctcgccgg 242

>dbj|AK105989.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G11, full
           insert sequence
          Length = 1716

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 161 gccgtctgctccgagcccaaagggatcccgtcgtcgtccagtggagccacggtgccgttg 220
           ||||||||||||||||  || | |||  |||||||||  |||||| |||||||| |||||
Sbjct: 149 gccgtctgctccgagcgaaatgcgatttcgtcgtcgttgagtggaaccacggtggcgttg 208

                                       
Query: 221 agccacaggcatggcccgtgctcgccgg 248
           | |||| |||| || || ||||||||||
Sbjct: 209 aaccaccggcacgggccatgctcgccgg 236

>dbj|AK101967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076I21, full
           insert sequence
          Length = 1736

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 161 gccgtctgctccgagcccaaagggatcccgtcgtcgtccagtggagccacggtgccgttg 220
           ||||||||||||||||  || | |||  |||||||||  |||||| |||||||| |||||
Sbjct: 154 gccgtctgctccgagcgaaatgcgatttcgtcgtcgttgagtggaaccacggtggcgttg 213

                                       
Query: 221 agccacaggcatggcccgtgctcgccgg 248
           | |||| |||| || || ||||||||||
Sbjct: 214 aaccaccggcacgggccatgctcgccgg 241

>ref|NM_192718.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1413

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 210 cggtgccgttgagccacaggcatggcccgtgctcgccggcg 250
           ||||| ||||||||||| || | ||||| ||||||||||||
Sbjct: 155 cggtgacgttgagccaccggtacggcccatgctcgccggcg 195



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 276 aggagcggctccgccgtgacacgctccgagccggctacgtccagcggaagttctcc 331
           |||||| |||||||||||||  ||||||||| | |||| |||  || |||||||||
Sbjct: 230 aggagctgctccgccgtgaccagctccgagctgactacatccgacgcaagttctcc 285

>gb|BC037460.1| Mus musculus disrupted in renal carcinoma 2 (human), mRNA (cDNA
           clone MGC:47126 IMAGE:4190539), complete cds
          Length = 2073

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 52  gcggctgccgctcctcctcct 72
           |||||||||||||||||||||
Sbjct: 132 gcggctgccgctcctcctcct 112

>gb|AC129574.8| Mus musculus chromosome 16, clone RP23-78C2, complete sequence
          Length = 214649

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 52     gcggctgccgctcctcctcct 72
              |||||||||||||||||||||
Sbjct: 161031 gcggctgccgctcctcctcct 161011

>dbj|AK172331.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830201N18 product:disrupted in renal
           carcinoma 2 (human), full insert sequence
          Length = 2090

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 52  gcggctgccgctcctcctcct 72
           |||||||||||||||||||||
Sbjct: 173 gcggctgccgctcctcctcct 153

>dbj|AK034214.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330164E21 product:hypothetical
           Trypsin-like serine proteases structure containing
           protein, full insert sequence
          Length = 4555

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 52  gcggctgccgctcctcctcct 72
           |||||||||||||||||||||
Sbjct: 158 gcggctgccgctcctcctcct 138

>emb|CR378099.1| Pinus pinaster SSR, clone PPB2F11
          Length = 647

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  gggagagtgagcaaggaggag 32
           |||||||||||||||||||||
Sbjct: 80  gggagagtgagcaaggaggag 100

>emb|CR378086.1| Pinus pinaster SSR, clone PPB2D04
          Length = 654

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  gggagagtgagcaaggaggag 32
           |||||||||||||||||||||
Sbjct: 91  gggagagtgagcaaggaggag 111

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 210      cggtgccgttgagccacaggcatggcccgtgctcgccggcg 250
                ||||| ||||||||||| || | ||||| ||||||||||||
Sbjct: 24014794 cggtgacgttgagccaccggtacggcccatgctcgccggcg 24014834



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                        
Query: 276      aggagcggctccgccgtgacacgctccgagccggctacgtccagcggaagttctcc 331
                |||||| |||||||||||||  ||||||||| | |||| |||  || |||||||||
Sbjct: 24014869 aggagctgctccgccgtgaccagctccgagctgactacatccgacgcaagttctcc 24014924

>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0090K04
          Length = 152556

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 210    cggtgccgttgagccacaggcatggcccgtgctcgccggcg 250
              ||||| ||||||||||| || | ||||| ||||||||||||
Sbjct: 129316 cggtgacgttgagccaccggtacggcccatgctcgccggcg 129356



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                      
Query: 276    aggagcggctccgccgtgacacgctccgagccggctacgtccagcggaagttctcc 331
              |||||| |||||||||||||  ||||||||| | |||| |||  || |||||||||
Sbjct: 129391 aggagctgctccgccgtgaccagctccgagctgactacatccgacgcaagttctcc 129446

>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 48     tctcgcggctgccgctcctcctcct 72
              ||||||||| |||||||||||||||
Sbjct: 122605 tctcgcggccgccgctcctcctcct 122581



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 48   tctcgcggctgccgctcctcctcct 72
            ||||||||| |||||||||||||||
Sbjct: 4412 tctcgcggccgccgctcctcctcct 4436

>ref|NM_153550.2| Mus musculus disrupted in renal carcinoma 2 (human) (Dirc2), mRNA
          Length = 4555

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 52  gcggctgccgctcctcctcct 72
           |||||||||||||||||||||
Sbjct: 158 gcggctgccgctcctcctcct 138

>ref|NM_053245.1| Mus musculus aryl hydrocarbon receptor-interacting protein-like 1
           (Aipl1), mRNA
          Length = 1075

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 55  gctgccgctcctcctcctgt 74
           ||||||||||||||||||||
Sbjct: 964 gctgccgctcctcctcctgt 945

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 372     tcaaggtgccgaccgagctg 391
               ||||||||||||||||||||
Sbjct: 5242516 tcaaggtgccgaccgagctg 5242497

>ref|NM_000748.1| Homo sapiens cholinergic receptor, nicotinic, beta 2 (neuronal)
           (CHRNB2), mRNA
          Length = 2448

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ccaggaaccaccgcggcggc 349
           ||||||||||||||||||||
Sbjct: 118 ccaggaaccaccgcggcggc 137

>gb|BC028285.1| Mus musculus aryl hydrocarbon receptor-interacting protein-like 1,
            mRNA (cDNA clone MGC:25485 IMAGE:4501401), complete cds
          Length = 2411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   gctgccgctcctcctcctgt 74
            ||||||||||||||||||||
Sbjct: 1843 gctgccgctcctcctcctgt 1824

>emb|AL592078.10| Human DNA sequence from clone RP11-61L14 on chromosome 1 Contains the
             3' end of a novel gene (DKFZp434M202), the  UBE2Q gene for
             ubiquitin-conjugating enzyme E2Q (putative), a novel gene,
             the CHRNB2 gene for cholinergic receptor, nicotinic, beta
             polypeptide 2 (neuronal), a novel gene, the 3' end of the
             ADAR gene for adenosine deaminase, RNA-specific, complete
             sequence
          Length = 64759

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   ccaggaaccaccgcggcggc 349
             ||||||||||||||||||||
Sbjct: 18747 ccaggaaccaccgcggcggc 18728

>emb|X53179.1|HSHACHRB2 Human mRNA for neuronal nicotinic acetylcholine receptor beta-2
           subunit
          Length = 1771

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ccaggaaccaccgcggcggc 349
           ||||||||||||||||||||
Sbjct: 20  ccaggaaccaccgcggcggc 39

>emb|BX321917.4| Mouse DNA sequence from clone RP23-401C17 on chromosome 11 Contains
            the Aipl1 gene for aryl hydrocarbon receptor-interacting
            protein-like 1, complete sequence
          Length = 17884

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   gctgccgctcctcctcctgt 74
            ||||||||||||||||||||
Sbjct: 8145 gctgccgctcctcctcctgt 8164

>gb|AF077186.2| Homo sapiens neuronal nicotinic acetylcholine receptor beta 2
            (CHRNB2) gene, complete cds
          Length = 11944

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  ccaggaaccaccgcggcggc 349
            ||||||||||||||||||||
Sbjct: 3239 ccaggaaccaccgcggcggc 3258

>emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in linkage group 5, complete
              sequence
          Length = 204925

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     gctgccgctcctcctcctgt 74
              ||||||||||||||||||||
Sbjct: 142450 gctgccgctcctcctcctgt 142469

>gb|AF296412.1|AF296412 Mus musculus aryl-hydrocarbon interacting protein-like 1 (Aipl1)
           mRNA, complete cds
          Length = 1075

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 55  gctgccgctcctcctcctgt 74
           ||||||||||||||||||||
Sbjct: 964 gctgccgctcctcctcctgt 945

>dbj|AK020825.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930007I01 product:aryl hydrocarbon
           receptor-interacting protein-like 1, full insert
           sequence
          Length = 716

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 55  gctgccgctcctcctcctgt 74
           ||||||||||||||||||||
Sbjct: 163 gctgccgctcctcctcctgt 144

>gb|AC155949.8| Mus musculus 6 BAC RP24-407P20 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 179931

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 102    ccagtgcagcgggtgagcagagct 125
              ||||||||| ||||||||||||||
Sbjct: 111378 ccagtgcagtgggtgagcagagct 111355

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     tcgtctcgcggctgccgctc 64
              ||||||||||||||||||||
Sbjct: 391754 tcgtctcgcggctgccgctc 391773

>ref|XM_215469.3| PREDICTED: Rattus norvegicus microtubule-associated protein 1b
            (Map1b), mRNA
          Length = 10491

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  gcccaccaagaaggagccta 269
            ||||||||||||||||||||
Sbjct: 2447 gcccaccaagaaggagccta 2466

>emb|X60370.1|RRMAP1B5 R.norvegicus mRNA for microtubule associated protein IB
          Length = 7095

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  gcccaccaagaaggagccta 269
            ||||||||||||||||||||
Sbjct: 1995 gcccaccaagaaggagccta 2014

>emb|AJ001935.1|HSAJ1935 Homo sapiens CHRNB2 gene, exon 1 (and joined CDS)
          Length = 314

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ccaggaaccaccgcggcggc 349
           ||||||||||||||||||||
Sbjct: 20  ccaggaaccaccgcggcggc 39

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 338     caccgcggcggcggggtcctgcag 361
               |||||||||||||| |||||||||
Sbjct: 2930546 caccgcggcggcggcgtcctgcag 2930569

>gb|U62437.1|HSU62437 Human nicotinic acetylcholine receptor beta2 subunit precursor,
           mRNA, complete cds
          Length = 2448

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ccaggaaccaccgcggcggc 349
           ||||||||||||||||||||
Sbjct: 118 ccaggaaccaccgcggcggc 137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,401,351
Number of Sequences: 3902068
Number of extensions: 3401351
Number of successful extensions: 60816
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 60376
Number of HSP's gapped (non-prelim): 453
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)