| Clone Name | baet48h05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550032.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1980 Score = 113 bits (57), Expect = 7e-23 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1 cgattacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatct 60 ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 598 cgattacttgctgggattggtattggcatatcttctgctcttgtgcccctttacatatct 657 Query: 61 gagatctcaccaactga 77 ||||| ||||| ||||| Sbjct: 658 gagatttcacccactga 674
>gb|BT018814.1| Zea mays clone EL01N0531A02.d mRNA sequence Length = 2008 Score = 113 bits (57), Expect = 7e-23 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1 cgattacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatct 60 ||||| |||||||| |||||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 717 cgattgcttgctggaattggtatcggggtctcatctgctcttgtacccctttacatatct 776 Query: 61 gagatctcaccaactga 77 ||||||||||||||||| Sbjct: 777 gagatctcaccaactga 793
>gb|AF215854.1|AF215854 Zea mays hexose transporter (pGlcT) mRNA, partial cds; nuclear gene for chloroplast product Length = 1874 Score = 113 bits (57), Expect = 7e-23 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1 cgattacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatct 60 ||||| |||||||| |||||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 599 cgattgcttgctggaattggtatcggggtctcatctgctcttgtacccctttacatatct 658 Query: 61 gagatctcaccaactga 77 ||||||||||||||||| Sbjct: 659 gagatctcaccaactga 675
>dbj|AK065247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J01, full insert sequence Length = 1982 Score = 113 bits (57), Expect = 7e-23 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1 cgattacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatct 60 ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 598 cgattacttgctgggattggtattggcatatcttctgctcttgtgcccctttacatatct 657 Query: 61 gagatctcaccaactga 77 ||||| ||||| ||||| Sbjct: 658 gagatttcacccactga 674
>gb|AY112449.1| Zea mays CL1214_1 mRNA sequence Length = 1905 Score = 113 bits (57), Expect = 7e-23 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1 cgattacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatct 60 ||||| |||||||| |||||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 599 cgattgcttgctggaattggtatcggggtctcatctgctcttgtacccctttacatatct 658 Query: 61 gagatctcaccaactga 77 ||||||||||||||||| Sbjct: 659 gagatctcaccaactga 675
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 101 bits (51), Expect = 3e-19 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1 cgattacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatct 60 ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 1845441 cgattacttgctgggattggtattggcatatcttctgctcttgtgcccctttacatatct 1845500 Query: 61 gag 63 ||| Sbjct: 1845501 gag 1845503
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 101 bits (51), Expect = 3e-19 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1 cgattacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatct 60 ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 86823 cgattacttgctgggattggtattggcatatcttctgctcttgtgcccctttacatatct 86882 Query: 61 gag 63 ||| Sbjct: 86883 gag 86885
>gb|AY608701.1| Vitis vinifera plastid hexose transporter mRNA, complete cds; nuclear gene for plastid product Length = 2044 Score = 91.7 bits (46), Expect = 2e-16 Identities = 67/74 (90%) Strand = Plus / Plus Query: 4 ttacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatctgag 63 ||||||||||| ||||| || || ||||| ||||| |||||||| ||||||||||||||| Sbjct: 664 ttacttgctggcattggaattggcatctcatctgcacttgtgccactttacatatctgag 723 Query: 64 atctcaccaactga 77 |||||||||||||| Sbjct: 724 atctcaccaactga 737
>gb|AY036055.1| Olea europaea hexose transporter pGlT mRNA, complete cds; nuclear gene for plastid product Length = 2039 Score = 75.8 bits (38), Expect = 1e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 4 ttacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatctgag 63 ||||||||||| ||||| || || || || |||||| ||||||| ||||| ||||||||| Sbjct: 739 ttacttgctggaattggaattggtatatcgtctgctattgtgccactttatatatctgag 798 Query: 64 atctcaccaactga 77 |||||||||||||| Sbjct: 799 atctcaccaactga 812
>gb|AF215853.1|AF215853 Solanum tuberosum hexose transporter (pGlcT) mRNA, partial cds; nuclear gene for chloroplast product Length = 1650 Score = 75.8 bits (38), Expect = 1e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 4 ttacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatctgag 63 |||||| |||| ||||| || || ||||| |||||| ||||||| ||||||||||||||| Sbjct: 387 ttacttactggaattggcattggcatctcatctgctattgtgccactttacatatctgag 446 Query: 64 atctcaccaactga 77 |||||||| ||||| Sbjct: 447 atctcacccactga 460
>gb|BT012878.1| Lycopersicon esculentum clone 113977R, mRNA sequence Length = 2099 Score = 71.9 bits (36), Expect = 2e-10 Identities = 60/68 (88%) Strand = Plus / Plus Query: 4 ttacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatctgag 63 |||||| |||| ||||| || || ||||| |||||| ||||||| ||||||||||||||| Sbjct: 775 ttacttactggaattggcattggcatctcatctgctattgtgccactttacatatctgag 834 Query: 64 atctcacc 71 |||||||| Sbjct: 835 atctcacc 842
>gb|AF215852.1|AF215852 Nicotiana tabacum hexose transporter (pGlcT) mRNA, partial cds; nuclear gene for chloroplast product Length = 1795 Score = 63.9 bits (32), Expect = 5e-08 Identities = 59/68 (86%) Strand = Plus / Plus Query: 4 ttacttgctgggattggtatcgggatctcttctgctcttgtgcccctttacatatctgag 63 |||||| |||| ||||| || || ||||| |||||| ||||||| ||||||||||||||| Sbjct: 578 ttacttactggaattggcattggtatctcatctgctattgtgccactttacatatctgag 637 Query: 64 atctcacc 71 || ||||| Sbjct: 638 atttcacc 645
>ref|NM_203058.1| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT5G16150 transcript variant AT5G16150.3 mRNA, complete cds Length = 1995 Score = 50.1 bits (25), Expect = 8e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 ctttacatatctgagatctcaccaactga 77 ||||||||||||||||| ||||||||||| Sbjct: 875 ctttacatatctgagatatcaccaactga 903
>ref|NM_180497.1| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT5G16150 transcript variant AT5G16150.2 mRNA, complete cds Length = 1864 Score = 50.1 bits (25), Expect = 8e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 ctttacatatctgagatctcaccaactga 77 ||||||||||||||||| ||||||||||| Sbjct: 744 ctttacatatctgagatatcaccaactga 772
>ref|NM_121620.2| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT5G16150 transcript variant AT5G16150.1 mRNA, complete cds Length = 1880 Score = 50.1 bits (25), Expect = 8e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 ctttacatatctgagatctcaccaactga 77 ||||||||||||||||| ||||||||||| Sbjct: 760 ctttacatatctgagatatcaccaactga 788
>gb|AY117359.1| Arabidopsis thaliana putative sugar transporter (At5g16150) mRNA, complete cds Length = 1672 Score = 50.1 bits (25), Expect = 8e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 ctttacatatctgagatctcaccaactga 77 ||||||||||||||||| ||||||||||| Sbjct: 658 ctttacatatctgagatatcaccaactga 686
>gb|AY091052.1| Arabidopsis thaliana putative sugar transporter (At5g16150) mRNA, complete cds Length = 1876 Score = 50.1 bits (25), Expect = 8e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 ctttacatatctgagatctcaccaactga 77 ||||||||||||||||| ||||||||||| Sbjct: 744 ctttacatatctgagatatcaccaactga 772
>gb|AY058152.1| Arabidopsis thaliana AT5g16150/T21H19_70 mRNA, complete cds Length = 1877 Score = 50.1 bits (25), Expect = 8e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 ctttacatatctgagatctcaccaactga 77 ||||||||||||||||| ||||||||||| Sbjct: 760 ctttacatatctgagatatcaccaactga 788
>emb|BX830471.1|CNS09YQR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 50.1 bits (25), Expect = 8e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 ctttacatatctgagatctcaccaactga 77 ||||||||||||||||| ||||||||||| Sbjct: 879 ctttacatatctgagatatcaccaactga 907
>gb|AF000952.1|AF000952 Prunus armeniaca putative sugar transporter mRNA, complete cds Length = 2065 Score = 42.1 bits (21), Expect = 0.20 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 ctttacatatctgagatctcaccaactga 77 ||||| |||||||||||||| |||||||| Sbjct: 807 ctttatatatctgagatctctccaactga 835
>gb|AC149347.2| Phakopsora pachyrhizi clone JGIAFNA-33E15, complete sequence Length = 44825 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 ctcttctgctcttgtgccc 48 ||||||||||||||||||| Sbjct: 201 ctcttctgctcttgtgccc 219
>gb|AC149676.2| Bos taurus BAC CH240-43C16 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 168416 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 atatctgagatctcaccaa 73 ||||||||||||||||||| Sbjct: 136261 atatctgagatctcaccaa 136243
>emb|AL391318.21| Human DNA sequence from clone RP11-496H23 on chromosome 10, complete sequence Length = 45312 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 acatatctgagatctcacc 71 ||||||||||||||||||| Sbjct: 43196 acatatctgagatctcacc 43178
>emb|AL121771.17|HSJ548G19 Human DNA sequence from clone RP4-548G19 on chromosome 20 Contains the 5' end of the ZFP64 gene for zinc finger protein 64 homolog (mouse) and a CpG island, complete sequence Length = 61579 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 tatctgagatctcaccaac 74 ||||||||||||||||||| Sbjct: 55582 tatctgagatctcaccaac 55600
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 38.2 bits (19), Expect = 3.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 tacttgctgggattggtatcggg 27 ||||||||||||||||| ||||| Sbjct: 1703480 tacttgctgggattggtgtcggg 1703458
>emb|BX248117.9| Zebrafish DNA sequence from clone CH211-226D5, complete sequence Length = 181542 Score = 38.2 bits (19), Expect = 3.1 Identities = 25/27 (92%) Strand = Plus / Plus Query: 35 ctgctcttgtgcccctttacatatctg 61 |||||||||||||||||| ||||||| Sbjct: 152440 ctgctcttgtgcccctttgtatatctg 152466
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 tcttgtgcccctttacata 57 ||||||||||||||||||| Sbjct: 2891301 tcttgtgcccctttacata 2891319 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 619,953 Number of Sequences: 3902068 Number of extensions: 619953 Number of successful extensions: 35684 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35638 Number of HSP's gapped (non-prelim): 46 length of query: 77 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 56 effective length of database: 17,151,101,840 effective search space: 960461703040 effective search space used: 960461703040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)