>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 36.6 bits (83), Expect = 0.019
 Identities = 26/58 (44%), Positives = 31/58 (53%)
 Frame = +2

Query: 14  PPCPRCRAASSSALTRCAMPASRHLSGSRAATPTGCPRRLPRSSLAAFIALLPSTGPA 187
           PP P C +ASS     C+  AS   S S A+TP+G P     +S AA  ALL  TG A
Sbjct: 288 PPPPSCSSASS-----CSSSASSCSSASAASTPSGAPTCC--ASAAAAAALLYGTGGA 338

>SOCS7_MOUSE (Q8VHQ2) Suppressor of cytokine signaling 7 (SOCS-7)|
          Length = 579

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 22/59 (37%), Positives = 23/59 (38%)
 Frame = +1

Query: 1   ISNSAPVPPMSSSLFLCSYQVRYASLPAPLRQPGRHADRLPPAAPAFVSRSLHRPPPLH 177
           +  S  V PM SSL          S P P   P    D  P  AP   S SLH  PP H
Sbjct: 324 LPTSVLVAPMGSSL---------QSFPLPPPPPPHAPDAFPRIAPIRASESLHSQPPQH 373

>SOCS7_HUMAN (O14512) Suppressor of cytokine signaling 7 (SOCS-7) (Nck, Ash and|
           phospholipase C gamma-binding protein) (Nck-associated
           protein 4) (NAP-4) (Fragment)
          Length = 485

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 21/59 (35%), Positives = 23/59 (38%)
 Frame = +1

Query: 1   ISNSAPVPPMSSSLFLCSYQVRYASLPAPLRQPGRHADRLPPAAPAFVSRSLHRPPPLH 177
           +  S  V PM SSL          S P P   P    D  P  AP   + SLH  PP H
Sbjct: 203 LPTSVLVAPMGSSL---------QSFPLPPPPPPHAPDAFPRIAPIRAAESLHSQPPQH 252

>PROC_THET2 (P54893) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C|
           reductase)
          Length = 261

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = -2

Query: 171 GRRAMKAARDERGSRRGQPVGVAARLPERCREA----GIAHLVRAE 46
           GR  +K A  ERG  R + VGV  R PER RE     G+  L RA+
Sbjct: 12  GRSILKGAL-ERGFLRPEEVGVLGRTPERSRELAEPFGVRPLTRAD 56

>ZN687_HUMAN (Q8N1G0) Zinc finger protein 687|
          Length = 1237

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 94  QPGRHADRLPPAAPAFVSRSLHRPPP 171
           +PG H+D LPP+AP+        PPP
Sbjct: 169 EPGDHSDPLPPSAPSPTREGALTPPP 194

>NAC2_CHLRE (Q9LEM8) PsbD mRNA maturation factor Nac2, chloroplast precursor|
          Length = 1385

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +2

Query: 2   SQTLPPCPRCRAASSSA--LTRCAMPASRHLSGSRAATPTGCPRRLPRSSLAAFIALLPS 175
           SQ L    RC A S  A  LT     AS   +GS +++  G P   PR  +AA  ALLPS
Sbjct: 111 SQLLNAISRCAAGSPLARLLTGPHGAASATGAGSHSSS-AGAPTPTPRPDIAAAAALLPS 169

>THYG_HUMAN (P01266) Thyroglobulin precursor|
          Length = 2768

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 118  LPPAAPAFVSRSLHRPPPLHWTGS 189
            +P AAP    R    P PL+WTGS
Sbjct: 2231 VPYAAPPLAERRFQAPEPLNWTGS 2254

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
 Frame = +1

Query: 79  PAPLRQPGRHADRL--PPAAPAFVS---RSLHRPPPLHW 180
           P P RQP         PP+ P F     R +H PPP HW
Sbjct: 514 PPPHRQPRPPTPTYGQPPSPPTFSPPPPRQIHSPPPPHW 552

>GRIN2_HUMAN (O60269) G protein-regulated inducer of neurite outgrowth 2 (GRIN2)|
          Length = 458

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 32  RAASSSALTRC-AMPASRHLSGSRAATPTGCPRRLPRSSLAAFIALLPS 175
           +AA   A T C A+P +  L G R     GC   LP + + AF  L+ S
Sbjct: 216 KAAEQLATTTCHALPPAALLCGMREVRAGGCCHALPATGILAFPKLVAS 264

>YG31_YEAST (P53269) Hypothetical 27.2 kDa protein in SHY1-SPT6 intergenic|
           region
          Length = 259

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +1

Query: 4   SNSAPVPPMSSSLFLCSY--QVRYASLPAPLRQP 99
           SNS+ +PP+S+ LFL S+    R  SL  PLR+P
Sbjct: 52  SNSSKIPPLSAVLFLFSWSSSSRPYSLFLPLRKP 85

>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +1

Query: 58  QVRYASLPAPLRQPGRHADRLPPAAPAFVSRSLHRPPPLHWTGSGV 195
           QV  A+LP PL   G  A +LP   P      LH  PP   T +G+
Sbjct: 823 QVPGAALPNPLNMLGPQASQLP--CPPVTQSPLHPTPPPASTAAGM 866

>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)|
          Length = 367

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 17  PCPRCRAASSSALTRCAMPASRHLSGSRAATPTGCPRRLPRSSLAAFI 160
           P  R     SS+ + C+  AS   S S A+TP+G P     ++ AA +
Sbjct: 258 PTSRTPPPPSSSASSCSSSASSCSSASAASTPSGAPTCCATAAAAALL 305

>DNAA_STRRE (Q9ZH76) Chromosomal replication initiator protein dnaA|
          Length = 643

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 79  PAPLRQPGRHADRLPPAAPAFVSRSLHRPPPLHW 180
           P P + P    D+LP   PA+ S   HRP P  W
Sbjct: 138 PRPEQLPSARPDQLPTVRPAYPS-EYHRPEPGAW 170

>GASR_MOUSE (P56481) Gastrin/cholecystokinin type B receptor (CCK-B receptor)|
           (CCK-BR) (Cholecystokinin-2 receptor) (CCK2-R)
          Length = 453

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 80  RHLSGSRAATPTGCPRRLPRSSLAAFIALLPSTGPARG 193
           RH++        GC  +LPRS L       P+TGP  G
Sbjct: 286 RHVTSLTGEDSDGCYVQLPRSRLEMTTLTTPTTGPGPG 323

>HIS4_PYRAE (Q8ZY14) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 229

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = -2

Query: 177 VEGRRAMKAARDERGSR--RGQPVGVAARLPERCREAGIAHLV 55
           +EG RA+K  R +RG+   +G P+ +AAR     R+A + H+V
Sbjct: 8   IEGGRAVKRIRGQRGNYIFQGDPLELAARF----RKAPLVHVV 46

>CT166_HUMAN (Q9H1L0) Protein C20orf166|
          Length = 117

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 192 PRAGPVEGRRAMKAARDERGSRRGQPVGVAARLPERCREAGIAHL 58
           P AGP    R  + AR E GS RGQ + V+  +    +E   AHL
Sbjct: 14  PAAGPAAVERTQQVARGEPGSARGQ-LQVSPEMSITHKEKENAHL 57

>FOXE3_MOUSE (Q9QY14) Forkhead box protein E3|
          Length = 288

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 21/56 (37%), Positives = 24/56 (42%)
 Frame = +2

Query: 17  PCPRCRAASSSALTRCAMPASRHLSGSRAATPTGCPRRLPRSSLAAFIALLPSTGP 184
           P P C AA  +A   CA  AS  L  S A+   G P  LP   L A      + GP
Sbjct: 213 PEPPCCAAPDAAFPPCAAAASPPLY-SPASERLGLPAPLPAQPLLALAGSAGALGP 267

>PDXA_NEIMA (Q9JX42) 4-hydroxythreonine-4-phosphate dehydrogenase (EC|
           1.1.1.262) (4-(phosphohydroxy)-L-threonine
           dehydrogenase)
          Length = 329

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 9/38 (23%)
 Frame = -2

Query: 123 GQPVGVA---------ARLPERCREAGIAHLVRAEEEA 37
           G+P G+          ARLP RC   G  HL+RA  EA
Sbjct: 11  GEPAGIGPDICLDLAFARLPCRCAVLGDKHLLRARAEA 48

>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2
          Length = 863

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = +2

Query: 11  LPPCPRCRAASSSALTRCAMPASRHLSGSRAATPTGCPRRLPRSSLAAFIALLPSTGPA 187
           +P  P  R   +    R +  ASR LS S+ + P G P   P +S     +  P  GPA
Sbjct: 768 VPGSPATRVGPALPARRLSR-ASRPLSASQPSLPHGAPAPSPAASARPASSSTPRLGPA 825

>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 18/53 (33%), Positives = 22/53 (41%)
 Frame = +1

Query: 13  APVPPMSSSLFLCSYQVRYASLPAPLRQPGRHADRLPPAAPAFVSRSLHRPPP 171
           AP PP S+S  L S +      P P R P       PP  P   + +   PPP
Sbjct: 295 APPPPTSASPSLLSNRP-----PPPARDPPSRGAAPPPPPPVIRNGARDAPPP 342

>KR1_BHV1S (Q08097) Serine/threonine-protein kinase (EC 2.7.11.1)|
          Length = 467

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 18/40 (45%), Positives = 19/40 (47%)
 Frame = -2

Query: 168 RRAMKAARDERGSRRGQPVGVAARLPERCREAGIAHLVRA 49
           R A   A +  GSR GQ V  AA  P RC   G A L  A
Sbjct: 20  RFACCVAAEPSGSRLGQSVRGAAAAPARCAAEGSADLYLA 59

>NOS3_BOVIN (P29473) Nitric-oxide synthase, endothelial (EC 1.14.13.39)|
           (EC-NOS) (NOS type III) (NOSIII) (Endothelial NOS)
           (eNOS) (Constitutive NOS) (cNOS)
          Length = 1204

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = +1

Query: 16  PVPP----MSSSLFLCSYQVRYASLPAPLRQPGRHADRLPPAAPAFVSRSLHRPP 168
           P PP    +   L LC  Q   +  P P R P       P  +PA  S +L RPP
Sbjct: 10  PGPPCGLGLGLGLGLCGKQGPASPAPEPSRAPAPATPHAPDHSPAPNSPTLTRPP 64

>RL5_PYRAE (Q8ZSU7) 50S ribosomal protein L5P|
          Length = 179

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -2

Query: 168 RRAMKAARDERGSRRGQPVGVAARLPERCREAGIAHLVRA 49
           RRA K+ +D  G R+G+P+GVA  L    R+  +  L+RA
Sbjct: 54  RRAKKSIKDF-GIRKGEPIGVAVTLR---RDQAVNFLMRA 89

>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2) (Hyperpolarization-activated
           cation channel 1) (HAC-1)
          Length = 863

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = +2

Query: 11  LPPCPRCRAASSSALTRCAMPASRHLSGSRAATPTGCPRRLPRSSLAAFIALLPSTGPA 187
           +P  P  R   +    R +  ASR LS S+ + P G P   P +S     +  P  GPA
Sbjct: 768 VPGSPATRVGPALPARRLSR-ASRPLSASQPSLPHGVPAPSPAASARPASSSTPRLGPA 825

>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
          Length = 559

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
 Frame = +1

Query: 16  PVPPMSSSLFLCSYQVRYASL--------PAPLRQPGRHADRLPPAAPAFV 144
           P PP+       S  V  A+L        PAP   PG HA  +PP+ P+ V
Sbjct: 428 PPPPLPPPGIRPSSPVAVAALAHPPSGLHPAPSTAPGPHAPLMPPSPPSQV 478

>CTPF_MYCTU (P63687) Probable cation-transporting ATPase F (EC 3.6.3.-)|
          Length = 905

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +2

Query: 5   QTLPPCPRCRAASSSALTRCAMPASRHLSGSRAATPTGCPRRLPRSSLAAFIALLPSTGP 184
           Q +   PR  AAS+ A    A  A + ++G  A T T         ++A  + LL +T P
Sbjct: 537 QAMSDPPRAAAASAVAACHSAGIAVKMITGDHAGTAT---------AIATEVGLLDNTEP 587

Query: 185 ARG 193
           A G
Sbjct: 588 AAG 590

>CTPF_MYCBO (P63688) Probable cation-transporting ATPase F (EC 3.6.3.-)|
          Length = 905

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +2

Query: 5   QTLPPCPRCRAASSSALTRCAMPASRHLSGSRAATPTGCPRRLPRSSLAAFIALLPSTGP 184
           Q +   PR  AAS+ A    A  A + ++G  A T T         ++A  + LL +T P
Sbjct: 537 QAMSDPPRAAAASAVAACHSAGIAVKMITGDHAGTAT---------AIATEVGLLDNTEP 587

Query: 185 ARG 193
           A G
Sbjct: 588 AAG 590

>NOS3_PIG (Q28969) Nitric-oxide synthase, endothelial (EC 1.14.13.39)|
           (EC-NOS) (NOS type III) (NOSIII) (Endothelial NOS)
           (eNOS) (Constitutive NOS) (cNOS)
          Length = 1204

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
 Frame = +1

Query: 16  PVPP----MSSSLFLCSYQVRYASLPAPLRQPGRHADRLPPAAPAFVSRSLHRPP 168
           P PP    +   L LC  Q      P P R P       P  +PA  S +L RPP
Sbjct: 10  PGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPAPATPHAPEHSPAPNSPTLTRPP 64

>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein|
           ATHB-4)
          Length = 318

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 18/44 (40%), Positives = 19/44 (43%)
 Frame = +2

Query: 8   TLPPCPRCRAASSSALTRCAMPASRHLSGSRAATPTGCPRRLPR 139
           TL  CP C   SSSA T  A P       S   TPT   R  P+
Sbjct: 266 TLTMCPSCERVSSSAATVTAAP-------STTTTPTVVGRPSPQ 302

>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +1

Query: 13  APVPPMSSSLFLCSYQVRYASLPAPLRQPGRHADRLPPAAPAFVSRSLHRPPP 171
           AP PP S++  L S +      P P R+P       PP  P   + +   PPP
Sbjct: 295 APPPPTSATPSLLSNRP-----PPPAREPPSRGAAPPPPPPMIRNGARDAPPP 342

>ALGP_PSEAE (P15276) Transcriptional regulatory protein algP (Alginate|
           regulatory protein algR3)
          Length = 352

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +2

Query: 5   QTLPPCPRCRAASSSALTRCAMPASRHLSGSRAATPTGCPRRLPRSSLAA-FIALLPSTG 181
           +T+   P  + A+  A    A PA++  +   AA PT  P   P +  AA   A  P+  
Sbjct: 152 KTVAAKPAAKPAAKPAAKPAAKPAAKTAAAKPAAKPTAKPAAKPAAKPAAKTAAAKPAAK 211

Query: 182 PA 187
           PA
Sbjct: 212 PA 213

>EX3_HAEIN (P44318) Exodeoxyribonuclease III (EC 3.1.11.2) (Exonuclease III)|
           (EXO III)
          Length = 267

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -2

Query: 156 KAARDERGSRRGQPVGVAARLPERCREAGIAHLVRAEEEAARH 28
           K   D RG R    + V+ +L ERC + GIA  +RA E+ + H
Sbjct: 218 KGFDDNRGLRIDH-ILVSQKLAERCVDVGIALDIRAMEKPSDH 259


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,780,061
Number of Sequences: 219361
Number of extensions: 489118
Number of successful extensions: 2566
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2562
length of database: 80,573,946
effective HSP length: 40
effective length of database: 71,799,506
effective search space used: 1723188144
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)