ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet48g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_511015.1| PREDICTED: Pan troglodytes similar to chemokine... 44 0.16
2gb|AC018557.9| Homo sapiens chromosome 16 clone RP11-63M22, comp... 44 0.16
3gb|AC010542.7| Homo sapiens chromosome 16 clone RP11-403P17, com... 44 0.16
4gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.5
5gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 2.5
6emb|AL035659.22|HS979N1 Human DNA sequence from clone RP5-979N1 ... 40 2.5
7emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52),... 40 2.5
8gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 2.5
9dbj|AK023849.1| Homo sapiens cDNA FLJ13787 fis, clone PLACE4000670 40 2.5
10gb|AY282416.1| Homo sapiens Toll-interleukin 1 receptor (TIR) do... 40 2.5
11dbj|AK086131.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 2.5
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
13dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
14gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, co... 40 2.5
15gb|AC114732.5| Homo sapiens BAC clone RP13-1012F16 from 2, compl... 40 2.5
16dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 2.5
17dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
18dbj|AP001318.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 2.5
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.5
20dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 2.5
21gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, co... 40 2.5
22gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 1... 40 2.5
23gb|AC008368.21| Trypanosoma brucei chromosome 2 clone RPCI93-1F7... 38 9.7
24gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 38 9.7
25ref|XM_324411.1| Neurospora crassa OR74A predicted protein (NCU0... 38 9.7
26ref|XM_951336.1| Neurospora crassa OR74A hypothetical protein (N... 38 9.7
27ref|XM_656860.1| Aspergillus nidulans FGSC A4 hypothetical prote... 38 9.7
28gb|BC096518.1| Xenopus tropicalis hypothetical protein LOC613058... 38 9.7
29ref|XM_946631.1| Trypanosoma brucei TREU927 hypothetical protein... 38 9.7
30ref|XM_744153.1| Aspergillus fumigatus Af293 hypothetical protei... 38 9.7
31ref|XM_800999.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 9.7
32gb|AY113672.1| Linuparus trigonus 28S ribosomal RNA gene, partia... 38 9.7
33emb|AL359816.16| Human DNA sequence from clone RP11-37P5 on chro... 38 9.7
34gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 38 9.7
35emb|AL138807.12| Human DNA sequence from clone RP5-827A12 on chr... 38 9.7
36gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 38 9.7
37emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 38 9.7
38gb|AY701414.1| Pavlova lutheri beta-ketoacyl-CoA synthase mRNA, ... 38 9.7
39emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 38 9.7
40gb|AC008053.13| Homo sapiens chromosome 17, clone RP5-954K8, com... 38 9.7
41ref|XM_691991.1| PREDICTED: Danio rerio similar to zinc finger p... 38 9.7
42gb|AC135178.13| Homo sapiens chromosome 17, clone RP11-849F2, co... 38 9.7
43gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, comple... 38 9.7
44dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 9.7
45gb|AC106019.4| Homo sapiens chromosome 17, clone CTD-2540E3, com... 38 9.7
46ref|XM_342992.2| PREDICTED: Rattus norvegicus transformation rel... 38 9.7
47dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 38 9.7
48emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone... 38 9.7
49gb|AC154769.2| Mus musculus BAC clone RP24-447K12 from 17, compl... 38 9.7
50dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
51emb|CR848269.1| Xenopus tropicalis finished cDNA, clone TNeu044l04 38 9.7
52emb|AL772352.8| Mouse DNA sequence from clone RP23-147F6 on chro... 38 9.7
53gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 38 9.7
54gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 38 9.7
55gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, st... 38 9.7
56gb|DQ079802.1| Nephropsis aculeata voucher KC2117 28S large subu... 38 9.7
57dbj|AB070942.1| Streptomyces avermitilis polyketide-2 biosynthet... 38 9.7 
>ref|XM_511015.1| PREDICTED: Pan troglodytes similar to chemokine-like factor
           superfamily 3 isoform a (LOC454146), mRNA
          Length = 1581

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 154 cttcatcgccctcctcccctcc 175
           ||||||||||||||||||||||
Sbjct: 528 cttcatcgccctcctcccctcc 549
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>gb|AC018557.9| Homo sapiens chromosome 16 clone RP11-63M22, complete sequence
          Length = 180709

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 154   cttcatcgccctcctcccctcc 175
             ||||||||||||||||||||||
Sbjct: 44104 cttcatcgccctcctcccctcc 44125
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>gb|AC010542.7| Homo sapiens chromosome 16 clone RP11-403P17, complete sequence
          Length = 188460

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 154    cttcatcgccctcctcccctcc 175
              ||||||||||||||||||||||
Sbjct: 127349 cttcatcgccctcctcccctcc 127370
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>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0095J10 map near S6115, complete sequence
          Length = 123717

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    gagcagcctcttcctctgct 52
             ||||||||||||||||||||
Sbjct: 51201 gagcagcctcttcctctgct 51182
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     ccgccacgccgaccggctgc 121
               ||||||||||||||||||||
Sbjct: 2334060 ccgccacgccgaccggctgc 2334079
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>emb|AL035659.22|HS979N1 Human DNA sequence from clone RP5-979N1 on chromosome 22q13.1-13.32,
             complete sequence
          Length = 102151

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   ggctgcccccggcggctccc 135
             ||||||||||||||||||||
Sbjct: 36018 ggctgcccccggcggctccc 35999
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>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome
          Length = 154746

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   cccgcgttcgtctctcgcag 152
             ||||||||||||||||||||
Sbjct: 16572 cccgcgttcgtctctcgcag 16553
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 95      agccgggccgccacgccgaccggc 118
               ||||||| ||||||||||||||||
Sbjct: 3435527 agccgggacgccacgccgaccggc 3435550



 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 94      cagccgggccgccacgccg 112
               |||||||||||||||||||
Sbjct: 2647063 cagccgggccgccacgccg 2647081
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>dbj|AK023849.1| Homo sapiens cDNA FLJ13787 fis, clone PLACE4000670
          Length = 5266

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 ggctgcccccggcggctccc 135
           ||||||||||||||||||||
Sbjct: 859 ggctgcccccggcggctccc 840
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>gb|AY282416.1| Homo sapiens Toll-interleukin 1 receptor (TIR) domain-containing
            adapter protein (TIRAP) gene, complete cds
          Length = 20684

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   cagcctcttcctctgctctt 55
            ||||||||||||||||||||
Sbjct: 3908 cagcctcttcctctgctctt 3927
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>dbj|AK086131.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930007J09 product:unclassifiable, full
           insert sequence
          Length = 2467

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 145 tctcgcagccttcatcgccctcctcccc 172
           |||||| ||| |||||||||||||||||
Sbjct: 544 tctcgccgccgtcatcgccctcctcccc 571
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       gagcagcctcttcctctgct 52
                ||||||||||||||||||||
Sbjct: 12979304 gagcagcctcttcctctgct 12979285
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 159     tcgccctcctcccctccactggac 182
               ||||||||||||||||| ||||||
Sbjct: 2385971 tcgccctcctcccctcccctggac 2385994



 Score = 38.2 bits (19), Expect = 9.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 145     tctcgcagccttcatcgccctcctccc 171
               |||||| |||||| |||||||||||||
Sbjct: 3312810 tctcgccgccttcttcgccctcctccc 3312784
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>gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, complete sequence
          Length = 38480

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   gcccccggcggctcccgcgt 139
             ||||||||||||||||||||
Sbjct: 11841 gcccccggcggctcccgcgt 11860
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>gb|AC114732.5| Homo sapiens BAC clone RP13-1012F16 from 2, complete sequence
          Length = 91526

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   cctcctcccctccactggac 182
             ||||||||||||||||||||
Sbjct: 29404 cctcctcccctccactggac 29385
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     ttcgtctctcgcagccttca 158
               ||||||||||||||||||||
Sbjct: 1026071 ttcgtctctcgcagccttca 1026052
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>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077B15
          Length = 139345

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 159   tcgccctcctcccctccactggac 182
             ||||||||||||||||| ||||||
Sbjct: 88979 tcgccctcctcccctcccctggac 89002
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>dbj|AP001318.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-712L6, complete
             sequence
          Length = 159565

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    cagcctcttcctctgctctt 55
             ||||||||||||||||||||
Sbjct: 55782 cagcctcttcctctgctctt 55801
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       gagcagcctcttcctctgct 52
                ||||||||||||||||||||
Sbjct: 13059483 gagcagcctcttcctctgct 13059464
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     ccgccacgccgaccggctgc 121
               ||||||||||||||||||||
Sbjct: 1282897 ccgccacgccgaccggctgc 1282916
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>gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, complete sequence
          Length = 185933

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 31     tcgagcagcctcttcctctgctct 54
              |||||||| |||||||||||||||
Sbjct: 133453 tcgagcagtctcttcctctgctct 133430
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>gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 19q13.3 (obtained by
             automated sequence analysis)
          Length = 37314

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   gcccccggcggctcccgcgt 139
             ||||||||||||||||||||
Sbjct: 27569 gcccccggcggctcccgcgt 27550
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>gb|AC008368.21| Trypanosoma brucei chromosome 2 clone RPCI93-1F7, complete sequence
          Length = 150968

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    gcagcctcttcctctgctc 53
             |||||||||||||||||||
Sbjct: 96739 gcagcctcttcctctgctc 96721
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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 35      gcagcctcttcctctgctc 53
               |||||||||||||||||||
Sbjct: 1037537 gcagcctcttcctctgctc 1037519
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>ref|XM_324411.1| Neurospora crassa OR74A predicted protein (NCU05055.1) partial mRNA
          Length = 1215

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 157 catcgccctcctcccctcc 175
           |||||||||||||||||||
Sbjct: 819 catcgccctcctcccctcc 801
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>ref|XM_951336.1| Neurospora crassa OR74A hypothetical protein (NCU05055.1) partial
           mRNA
          Length = 1215

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 157 catcgccctcctcccctcc 175
           |||||||||||||||||||
Sbjct: 819 catcgccctcctcccctcc 801
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>ref|XM_656860.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4348.2), mRNA
          Length = 720

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 153 ccttcatcgccctcctcccctcc 175
           |||||| ||||||||||||||||
Sbjct: 83  ccttcaacgccctcctcccctcc 105
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>gb|BC096518.1| Xenopus tropicalis hypothetical protein LOC613058, mRNA (cDNA clone
           IMAGE:7016064), partial cds
          Length = 2279

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 152 gccttcatcgccctcctcc 170
           |||||||||||||||||||
Sbjct: 235 gccttcatcgccctcctcc 217
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>ref|XM_946631.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.2.5760)
            partial mRNA
          Length = 9228

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 35   gcagcctcttcctctgctc 53
            |||||||||||||||||||
Sbjct: 3464 gcagcctcttcctctgctc 3446
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>ref|XM_744153.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g01100)
           partial mRNA
          Length = 864

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  cgagcagcctcttcctctg 50
           |||||||||||||||||||
Sbjct: 551 cgagcagcctcttcctctg 533
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>ref|XM_800999.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507933.10) partial mRNA
          Length = 6972

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 94  cagccgggccgccacgccg 112
           |||||||||||||||||||
Sbjct: 803 cagccgggccgccacgccg 821
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>gb|AY113672.1| Linuparus trigonus 28S ribosomal RNA gene, partial sequence
          Length = 737

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 110 ccgaccggctgcccccggc 128
           |||||||||||||||||||
Sbjct: 82  ccgaccggctgcccccggc 100
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>emb|AL359816.16| Human DNA sequence from clone RP11-37P5 on chromosome 10 Contains a
            ferritin light polypeptide (FTL) pseudogene, complete
            sequence
          Length = 102101

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 33   gagcagcctcttcctctgctctt 55
            ||||||||||||||||| |||||
Sbjct: 3470 gagcagcctcttcctctcctctt 3492
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 100     ggccgccacgccgaccggc 118
               |||||||||||||||||||
Sbjct: 4663179 ggccgccacgccgaccggc 4663197
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>emb|AL138807.12| Human DNA sequence from clone RP5-827A12 on chromosome 20 Contains part
             of the ATP9A (KIAA0611) gene for ATPase class II type 9A
             and a ribosomal protein L29 (RPL29) pseudogene, complete
             sequence
          Length = 67895

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 163   cctcctcccctccactgga 181
             |||||||||||||||||||
Sbjct: 24227 cctcctcccctccactgga 24209
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 100     ggccgccacgccgaccggc 118
               |||||||||||||||||||
Sbjct: 3872360 ggccgccacgccgaccggc 3872342
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 124     ccggcggctcccgcgttcg 142
               |||||||||||||||||||
Sbjct: 3345290 ccggcggctcccgcgttcg 3345272
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>gb|AY701414.1| Pavlova lutheri beta-ketoacyl-CoA synthase mRNA, complete cds
          Length = 2061

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 100 ggccgccacgccgaccggc 118
           |||||||||||||||||||
Sbjct: 948 ggccgccacgccgaccggc 966
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 89     tccggcagccgggccgccacgcc 111
              ||||||||| |||||||||||||
Sbjct: 256826 tccggcagcagggccgccacgcc 256804
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>gb|AC008053.13| Homo sapiens chromosome 17, clone RP5-954K8, complete sequence
          Length = 110144

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    cagcctcttcctctgctct 54
             |||||||||||||||||||
Sbjct: 63777 cagcctcttcctctgctct 63759
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>ref|XM_691991.1| PREDICTED: Danio rerio similar to zinc finger protein 462
            (LOC568649), partial mRNA
          Length = 6243

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 164  ctcctcccctccactggac 182
            |||||||||||||||||||
Sbjct: 1575 ctcctcccctccactggac 1557
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>gb|AC135178.13| Homo sapiens chromosome 17, clone RP11-849F2, complete sequence
          Length = 188340

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    cagcctcttcctctgctct 54
             |||||||||||||||||||
Sbjct: 47742 cagcctcttcctctgctct 47760
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>gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, complete plasmid sequence
          Length = 184457

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 102    ccgccacgccgaccggctg 120
              |||||||||||||||||||
Sbjct: 169561 ccgccacgccgaccggctg 169543
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 108     cgccgaccggctgcccccg 126
               |||||||||||||||||||
Sbjct: 3156256 cgccgaccggctgcccccg 3156238



 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 96      gccgggccgccacgccgaccggc 118
               ||||||||||| |||||||||||
Sbjct: 1909004 gccgggccgccccgccgaccggc 1908982
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>gb|AC106019.4| Homo sapiens chromosome 17, clone CTD-2540E3, complete sequence
          Length = 59257

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    cagcctcttcctctgctct 54
             |||||||||||||||||||
Sbjct: 38080 cagcctcttcctctgctct 38062
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>ref|XM_342992.2| PREDICTED: Rattus norvegicus transformation related protein 73
            (predicted) (Trp73_predicted), mRNA
          Length = 2441

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 36   cagcctcttcctctgctct 54
            |||||||||||||||||||
Sbjct: 2312 cagcctcttcctctgctct 2294
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 84      acctctccggcagccgggccgcc 106
               |||||||||| ||||||||||||
Sbjct: 1759015 acctctccgggagccgggccgcc 1758993
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>emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone B15P20
          Length = 74452

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 157   catcgccctcctcccctcc 175
             |||||||||||||||||||
Sbjct: 28634 catcgccctcctcccctcc 28652
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>gb|AC154769.2| Mus musculus BAC clone RP24-447K12 from 17, complete sequence
          Length = 157247

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 153   ccttcatcgccctcctcccctcc 175
             |||||||| ||||||||||||||
Sbjct: 48618 ccttcatctccctcctcccctcc 48596
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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1714_H10
          Length = 191580

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 145    tctcgcagccttcatcgccctcctccc 171
              |||||| |||||| |||||||||||||
Sbjct: 122503 tctcgccgccttcttcgccctcctccc 122477
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>emb|CR848269.1| Xenopus tropicalis finished cDNA, clone TNeu044l04
          Length = 1684

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 152 gccttcatcgccctcctcc 170
           |||||||||||||||||||
Sbjct: 160 gccttcatcgccctcctcc 142
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>emb|AL772352.8| Mouse DNA sequence from clone RP23-147F6 on chromosome 2, complete
              sequence
          Length = 204438

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 44     tcctctgctcttaccaggtgcgc 66
              |||||||||||| ||||||||||
Sbjct: 122375 tcctctgctcttcccaggtgcgc 122353
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 93      gcagccgggccgccacgccgacc 115
               |||||||||| ||||||||||||
Sbjct: 3936296 gcagccgggcggccacgccgacc 3936318
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 101    gccgccacgccgaccggct 119
              |||||||||||||||||||
Sbjct: 196332 gccgccacgccgaccggct 196314
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>gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, starter module and modules
             1-7, (tylG) gene, complete cds
          Length = 43280

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 120   gcccccggcggctcccgcg 138
             |||||||||||||||||||
Sbjct: 37674 gcccccggcggctcccgcg 37692
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>gb|DQ079802.1| Nephropsis aculeata voucher KC2117 28S large subunit ribosomal RNA
           gene, partial sequence
          Length = 1920

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 110 ccgaccggctgcccccggc 128
           |||||||||||||||||||
Sbjct: 734 ccgaccggctgcccccggc 752
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>dbj|AB070942.1| Streptomyces avermitilis polyketide-2 biosynthetic gene cluster
          Length = 27522

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 96    gccgggccgccacgccgaccggc 118
             ||||||||||| |||||||||||
Sbjct: 18804 gccgggccgccccgccgaccggc 18782


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,458,344
Number of Sequences: 3902068
Number of extensions: 1458344
Number of successful extensions: 121028
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119507
Number of HSP's gapped (non-prelim): 1521
length of query: 196
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 174
effective length of database: 17,147,199,772
effective search space: 2983612760328
effective search space used: 2983612760328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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