ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet48f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NASP_RABIT (P27123) Nuclear autoantigenic sperm protein (NASP) 31 0.62
2GSP_CRIFA (P90518) Glutathionylspermidine synthase (EC 6.3.1.8) 28 6.8
3GLNE_NOCFA (Q5YZ84) Glutamate-ammonia-ligase adenylyltransferase... 27 8.9

>NASP_RABIT (P27123) Nuclear autoantigenic sperm protein (NASP)|
          Length = 680

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -3

Query: 104 VRGEQLRKSDAPPNEASPLMPTDAARVGDGQRER 3
           V  +QL   D PP E SP++ T+AA VG    E+
Sbjct: 227 VLNQQLVGQDVPPVEESPMVTTEAAEVGSEVSEK 260



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>GSP_CRIFA (P90518) Glutathionylspermidine synthase (EC 6.3.1.8)|
          Length = 719

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 107 CVRGEQLRKSDAPPNEASPL-MPTDAARVGDGQRE 6
           CV+    R  D PP+ A+PL  P D   + DG+ E
Sbjct: 454 CVKLVNFRYRDGPPSNAAPLATPCDHPTIVDGEDE 488



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>GLNE_NOCFA (Q5YZ84) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 1004

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 45  HQWRRLVRWRVALP*LLPPHTRASDSDDSALSWCAR 152
           +++ RL+  R+ L  L   HT  +D D+  + W AR
Sbjct: 422 YEFLRLLEHRLQLQRLKRTHTLPADDDEEGMRWLAR 457


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,752,778
Number of Sequences: 219361
Number of extensions: 700484
Number of successful extensions: 1968
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1968
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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