ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet48f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ417496.1| Phyllostachys aureosulcata putative trypanothione-dependent peroxidase pseudogene mRNA, partial sequence Length = 833 Score = 315 bits (159), Expect = 4e-83 Identities = 253/283 (89%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||||||||||||||| ||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 335 gttactttgagcttagcaatcttcctacacttgtcctgattggtcctgatgggaagacac 276 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| || |||| | |||| |||||||| || |||||| ||||||||||||||||||| | Sbjct: 275 tgaacaacaatgtcgcggagataattgaagaacatggtatggatgcatgggaggggttcc 216 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 ||||| ||||||||||||||||||||| |||||||| ||||||||| ||||||| |||| Sbjct: 215 ccttcgatgcagagaagctggaaattcttgctgagaa-gcaaaggctcaagcagcatcac 157 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| ||| |||||||| |||| |||||||||||||||||||| || ||||||||||||| Sbjct: 156 agaccttgcagtcccttctggtcactggtgatttagactttgtaattgggaaagatggag 97 Query: 243 caaaggttcctgtagcagaacttgttgggaagactgtcctcct 285 ||| |||||||||| ||||||||||||||||||||||| |||| Sbjct: 96 caagggttcctgtatcagaacttgttgggaagactgtcatcct 54
>ref|XM_470924.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2069 Score = 299 bits (151), Expect = 2e-78 Identities = 250/283 (88%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| ||||||||||| | || |||||||| || ||||||||||||||||| ||||||| Sbjct: 875 gttattttgagcttagaggcctgcctacacttgtcctgattggtcctgatgggaagacac 934 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| || |||| |||| | ||||||||||||||||||| ||||||||||| ||||||| Sbjct: 935 tgaacaacaatgttgctgacataattgatgagcatggtcaagatgcatgggaagggtttc 994 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | |||| |||||||||| |||||||||| ||||||||||||||||||||||||| || || Sbjct: 995 ctttcactgcagagaagatggaaattcttgctgagaaggcaaaggctaaagcagagttac 1054 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| |||||||||||| |||| | ||||||||| |||||||| | || |||||||||| Sbjct: 1055 agaccttggagtcccttctggtcattggtgatttggactttgtgcttggaaaagatggag 1114 Query: 243 caaaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1115 caaaggttcctgtatcagaacttgttgggaagactgtcctcct 1157
>dbj|AK104893.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F03, full insert sequence Length = 1287 Score = 299 bits (151), Expect = 2e-78 Identities = 250/283 (88%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| ||||||||||| | || |||||||| || ||||||||||||||||| ||||||| Sbjct: 130 gttattttgagcttagaggcctgcctacacttgtcctgattggtcctgatgggaagacac 189 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| || |||| |||| | ||||||||||||||||||| ||||||||||| ||||||| Sbjct: 190 tgaacaacaatgttgctgacataattgatgagcatggtcaagatgcatgggaagggtttc 249 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | |||| |||||||||| |||||||||| ||||||||||||||||||||||||| || || Sbjct: 250 ctttcactgcagagaagatggaaattcttgctgagaaggcaaaggctaaagcagagttac 309 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| |||||||||||| |||| | ||||||||| |||||||| | || |||||||||| Sbjct: 310 agaccttggagtcccttctggtcattggtgatttggactttgtgcttggaaaagatggag 369 Query: 243 caaaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 370 caaaggttcctgtatcagaacttgttgggaagactgtcctcct 412
>dbj|AK069583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022B19, full insert sequence Length = 2057 Score = 299 bits (151), Expect = 2e-78 Identities = 250/283 (88%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| ||||||||||| | || |||||||| || ||||||||||||||||| ||||||| Sbjct: 889 gttattttgagcttagaggcctgcctacacttgtcctgattggtcctgatgggaagacac 948 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| || |||| |||| | ||||||||||||||||||| ||||||||||| ||||||| Sbjct: 949 tgaacaacaatgttgctgacataattgatgagcatggtcaagatgcatgggaagggtttc 1008 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | |||| |||||||||| |||||||||| ||||||||||||||||||||||||| || || Sbjct: 1009 ctttcactgcagagaagatggaaattcttgctgagaaggcaaaggctaaagcagagttac 1068 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| |||||||||||| |||| | ||||||||| |||||||| | || |||||||||| Sbjct: 1069 agaccttggagtcccttctggtcattggtgatttggactttgtgcttggaaaagatggag 1128 Query: 243 caaaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1129 caaaggttcctgtatcagaacttgttgggaagactgtcctcct 1171
>ref|XM_470929.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1746 Score = 276 bits (139), Expect = 4e-71 Identities = 247/283 (87%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| |||||||| |||| ||||||| || || ||||||||||||||||| ||||||| Sbjct: 830 gttattttgagctcagtggccttcctatgcttgtcctgattggtcctgatgggaagacac 889 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| | ||||||| | ||||||||||||||||||| ||||||||||| || |||| Sbjct: 890 tgaatgacgatattgctgacataattgatgagcatggtccagatgcatgggaaggttttc 949 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | ||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||| Sbjct: 950 ctttcagtgcagagaagctcgaaattcttgctgagaaggcaaaagctaaagcagaatcac 1009 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| ||||||||||| |||| ||||||||||| ||||||||| | ||||||||||| | Sbjct: 1010 agaccctggagtcccttctggtcactggtgatttggactttgtccttgggaaagatgggg 1069 Query: 243 caaaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1070 caaaggttcctgtatcagaacttgttgggaagactgtcctcct 1112
>gb|AY110214.1| Zea mays CL1652_1 mRNA sequence Length = 2105 Score = 270 bits (136), Expect = 2e-69 Identities = 244/280 (87%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 ||||||||||||||||| |||||| |||||||| |||||||| |||||||| ||||||| Sbjct: 915 gttactttgagcttagttctcttccaacactagttctgattggccctgatgggaagacac 974 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| || |||| | || | ||||||||| || |||||||| || ||||||||||| || | Sbjct: 975 tgaacaacaatgtcgccgacataattgacgaccatggttttgaggcatgggagggcttcc 1034 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 |||||||||| ||||||||||||||||| ||||||||||||||| |||||| || |||| Sbjct: 1035 ccttcagtgctgagaagctggaaattcttgctgagaaggcaaagattaaagctgcatcac 1094 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| ||||||||| || | | | |||| |||||||||||||||| || |||||||| | Sbjct: 1095 agaccttggagtccattctaatcagtggtcatttagactttgtcattggaaaagatggtg 1154 Query: 243 caaaggttcctgtagcagaacttgttgggaagactgtcct 282 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1155 caaaggttcctgtatcagaacttgttgggaagactgtcct 1194
>gb|U90944.1|ZMU90944 Zea mays PDI-like protein mRNA, complete cds Length = 2004 Score = 270 bits (136), Expect = 2e-69 Identities = 244/280 (87%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 ||||||||||||||||| |||||| |||||||| |||||||| |||||||| ||||||| Sbjct: 942 gttactttgagcttagttctcttccaacactagttctgattggccctgatgggaagacac 1001 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| || |||| | || | ||||||||| || |||||||| || ||||||||||| || | Sbjct: 1002 tgaacaacaatgtcgccgacataattgacgaccatggttttgaggcatgggagggcttcc 1061 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 |||||||||| ||||||||||||||||| ||||||||||||||| |||||| || |||| Sbjct: 1062 ccttcagtgctgagaagctggaaattcttgctgagaaggcaaagattaaagctgcatcac 1121 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| ||||||||| || | | | |||| |||||||||||||||| || |||||||| | Sbjct: 1122 agaccttggagtccattctaatcagtggtcatttagactttgtcattggaaaagatggtg 1181 Query: 243 caaaggttcctgtagcagaacttgttgggaagactgtcct 282 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1182 caaaggttcctgtatcagaacttgttgggaagactgtcct 1221
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 236 bits (119), Expect = 3e-59 Identities = 215/247 (87%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| ||||||||||| | || |||||||| || ||||||||||||||||| ||||||| Sbjct: 16408503 gttattttgagcttagaggcctgcctacacttgtcctgattggtcctgatgggaagacac 16408562 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| || |||| |||| | ||||||||||||||||||| ||||||||||| ||||||| Sbjct: 16408563 tgaacaacaatgttgctgacataattgatgagcatggtcaagatgcatgggaagggtttc 16408622 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | |||| |||||||||| |||||||||| ||||||||||||||||||||||||| || || Sbjct: 16408623 ctttcactgcagagaagatggaaattcttgctgagaaggcaaaggctaaagcagagttac 16408682 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| |||||||||||| |||| | ||||||||| |||||||| | || |||||||||| Sbjct: 16408683 agaccttggagtcccttctggtcattggtgatttggactttgtgcttggaaaagatggag 16408742 Query: 243 caaaggt 249 ||||||| Sbjct: 16408743 caaaggt 16408749 Score = 212 bits (107), Expect = 5e-52 Identities = 212/247 (85%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| |||||||| |||| ||||||| || || ||||||||||||||||| ||||||| Sbjct: 16444454 gttattttgagctcagtggccttcctatgcttgtcctgattggtcctgatgggaagacac 16444513 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| | ||||||| | ||||||||||||||||||| ||||||||||| || |||| Sbjct: 16444514 tgaatgacgatattgctgacataattgatgagcatggtccagatgcatgggaaggttttc 16444573 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | ||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||| Sbjct: 16444574 ctttcagtgcagagaagctcgaaattcttgctgagaaggcaaaagctaaagcagaatcac 16444633 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| ||||||||||| |||| ||||||||||| ||||||||| | ||||||||||| | Sbjct: 16444634 agaccctggagtcccttctggtcactggtgatttggactttgtccttgggaaagatgggg 16444693 Query: 243 caaaggt 249 ||||||| Sbjct: 16444694 caaaggt 16444700 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 245 aaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||| |||||||||||||||||||||||||||| Sbjct: 16445323 aaggttcctgtatcagaacttgttgggaagactgtcctcct 16445363 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 245 aaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||| |||||||||||||||||||||||||||| Sbjct: 16409174 aaggttcctgtatcagaacttgttgggaagactgtcctcct 16409214
>gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genomic sequence, complete sequence Length = 146775 Score = 236 bits (119), Expect = 3e-59 Identities = 215/247 (87%) Strand = Plus / Minus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| ||||||||||| | || |||||||| || ||||||||||||||||| ||||||| Sbjct: 58707 gttattttgagcttagaggcctgcctacacttgtcctgattggtcctgatgggaagacac 58648 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| || |||| |||| | ||||||||||||||||||| ||||||||||| ||||||| Sbjct: 58647 tgaacaacaatgttgctgacataattgatgagcatggtcaagatgcatgggaagggtttc 58588 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | |||| |||||||||| |||||||||| ||||||||||||||||||||||||| || || Sbjct: 58587 ctttcactgcagagaagatggaaattcttgctgagaaggcaaaggctaaagcagagttac 58528 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| |||||||||||| |||| | ||||||||| |||||||| | || |||||||||| Sbjct: 58527 agaccttggagtcccttctggtcattggtgatttggactttgtgcttggaaaagatggag 58468 Query: 243 caaaggt 249 ||||||| Sbjct: 58467 caaaggt 58461 Score = 212 bits (107), Expect = 5e-52 Identities = 212/247 (85%) Strand = Plus / Minus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| |||||||| |||| ||||||| || || ||||||||||||||||| ||||||| Sbjct: 22764 gttattttgagctcagtggccttcctatgcttgtcctgattggtcctgatgggaagacac 22705 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| | ||||||| | ||||||||||||||||||| ||||||||||| || |||| Sbjct: 22704 tgaatgacgatattgctgacataattgatgagcatggtccagatgcatgggaaggttttc 22645 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | ||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||| Sbjct: 22644 ctttcagtgcagagaagctcgaaattcttgctgagaaggcaaaagctaaagcagaatcac 22585 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| ||||||||||| |||| ||||||||||| ||||||||| | ||||||||||| | Sbjct: 22584 agaccctggagtcccttctggtcactggtgatttggactttgtccttgggaaagatgggg 22525 Query: 243 caaaggt 249 ||||||| Sbjct: 22524 caaaggt 22518 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 245 aaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||| |||||||||||||||||||||||||||| Sbjct: 58036 aaggttcctgtatcagaacttgttgggaagactgtcctcct 57996 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 245 aaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||| |||||||||||||||||||||||||||| Sbjct: 21895 aaggttcctgtatcagaacttgttgggaagactgtcctcct 21855
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 236 bits (119), Expect = 3e-59 Identities = 215/247 (87%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| ||||||||||| | || |||||||| || ||||||||||||||||| ||||||| Sbjct: 16402136 gttattttgagcttagaggcctgcctacacttgtcctgattggtcctgatgggaagacac 16402195 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| || |||| |||| | ||||||||||||||||||| ||||||||||| ||||||| Sbjct: 16402196 tgaacaacaatgttgctgacataattgatgagcatggtcaagatgcatgggaagggtttc 16402255 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | |||| |||||||||| |||||||||| ||||||||||||||||||||||||| || || Sbjct: 16402256 ctttcactgcagagaagatggaaattcttgctgagaaggcaaaggctaaagcagagttac 16402315 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| |||||||||||| |||| | ||||||||| |||||||| | || |||||||||| Sbjct: 16402316 agaccttggagtcccttctggtcattggtgatttggactttgtgcttggaaaagatggag 16402375 Query: 243 caaaggt 249 ||||||| Sbjct: 16402376 caaaggt 16402382 Score = 212 bits (107), Expect = 5e-52 Identities = 212/247 (85%) Strand = Plus / Plus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| |||||||| |||| ||||||| || || ||||||||||||||||| ||||||| Sbjct: 16438079 gttattttgagctcagtggccttcctatgcttgtcctgattggtcctgatgggaagacac 16438138 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| | ||||||| | ||||||||||||||||||| ||||||||||| || |||| Sbjct: 16438139 tgaatgacgatattgctgacataattgatgagcatggtccagatgcatgggaaggttttc 16438198 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | ||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||| Sbjct: 16438199 ctttcagtgcagagaagctcgaaattcttgctgagaaggcaaaagctaaagcagaatcac 16438258 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| ||||||||||| |||| ||||||||||| ||||||||| | ||||||||||| | Sbjct: 16438259 agaccctggagtcccttctggtcactggtgatttggactttgtccttgggaaagatgggg 16438318 Query: 243 caaaggt 249 ||||||| Sbjct: 16438319 caaaggt 16438325 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 245 aaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||| |||||||||||||||||||||||||||| Sbjct: 16438948 aaggttcctgtatcagaacttgttgggaagactgtcctcct 16438988 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 245 aaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||| |||||||||||||||||||||||||||| Sbjct: 16402807 aaggttcctgtatcagaacttgttgggaagactgtcctcct 16402847
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 212 bits (107), Expect = 5e-52 Identities = 212/247 (85%) Strand = Plus / Minus Query: 3 gttactttgagcttagtgatcttcctacactagtgctgattggtcctgatggtaagacac 62 |||| |||||||| |||| ||||||| || || ||||||||||||||||| ||||||| Sbjct: 139879 gttattttgagctcagtggccttcctatgcttgtcctgattggtcctgatgggaagacac 139820 Query: 63 tgagcagcaatattgcgggcataattgatgagcatggtttggatgcatgggaggggtttc 122 ||| | ||||||| | ||||||||||||||||||| ||||||||||| || |||| Sbjct: 139819 tgaatgacgatattgctgacataattgatgagcatggtccagatgcatgggaaggttttc 139760 Query: 123 ccttcagtgcagagaagctggaaattctagctgagaaggcaaaggctaaagcagcgtcac 182 | ||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||| Sbjct: 139759 ctttcagtgcagagaagctcgaaattcttgctgagaaggcaaaagctaaagcagaatcac 139700 Query: 183 agacattggagtcccttttggttactggtgatttagactttgtcatcgggaaagatggag 242 |||| ||||||||||| |||| ||||||||||| ||||||||| | ||||||||||| | Sbjct: 139699 agaccctggagtcccttctggtcactggtgatttggactttgtccttgggaaagatgggg 139640 Query: 243 caaaggt 249 ||||||| Sbjct: 139639 caaaggt 139633 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 245 aaggttcctgtagcagaacttgttgggaagactgtcctcct 285 |||||||||||| |||||||||||||||||||||||||||| Sbjct: 139010 aaggttcctgtatcagaacttgttgggaagactgtcctcct 138970
>gb|AY618475.1| Zea mays isolate bti00228 Ac insertion site Length = 1992 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 122 cccttcagtgcagagaagctggaaattctagctgagaaggcaa 164 ||||||||| | ||||||||||||||||| |||||||| |||| Sbjct: 412 cccttcagttctgagaagctggaaattcttgctgagaaagcaa 454
>gb|AC156613.9| Mus musculus chromosome 1, clone RP24-139P17, complete sequence Length = 132714 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aaggcaaaggctaaagcagc 177 |||||||||||||||||||| Sbjct: 77237 aaggcaaaggctaaagcagc 77256
>ref|XM_776408.1| PREDICTED: Strongylocentrotus purpuratus similar to putative acyl-CoA dehydrogenase (LOC576062), mRNA Length = 2265 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aaggcaaaggctaaagcagc 177 |||||||||||||||||||| Sbjct: 1204 aaggcaaaggctaaagcagc 1223
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 ggggtttcccttcagtgcagagaa 138 ||||||||||||||||||| |||| Sbjct: 410200 ggggtttcccttcagtgcatagaa 410177
>gb|AC079222.17| Mus musculus chromosome 1, clone RP22-292L24, complete sequence Length = 159700 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aaggcaaaggctaaagcagc 177 |||||||||||||||||||| Sbjct: 11108 aaggcaaaggctaaagcagc 11127
>gb|AC079134.24| Mus musculus chromosome 1, clone RP23-395H12, complete sequence Length = 204915 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 aaggcaaaggctaaagcagc 177 |||||||||||||||||||| Sbjct: 12133 aaggcaaaggctaaagcagc 12114 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,519,756 Number of Sequences: 3902068 Number of extensions: 2519756 Number of successful extensions: 48894 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48834 Number of HSP's gapped (non-prelim): 52 length of query: 285 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 263 effective length of database: 17,147,199,772 effective search space: 4509713540036 effective search space used: 4509713540036 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
